RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 LBHQ53QV2 105 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-219ENST00000440240 CARHSP1Q9Y2V2 147 aaKnown RBP12.44□□□□□ -0.42
CPNE1-219ENST00000440240 CTDSP1Q9GZU7 261 aa12.43□□□□□ -0.42
CPNE1-219ENST00000440240 C22orf24Q9Y442 160 aa12.43□□□□□ -0.42
CPNE1-219ENST00000440240 NUPR1O60356 82 aa12.42□□□□□ -0.42
CPNE1-219ENST00000440240 LINC00469Q8N7U9 141 aa12.42□□□□□ -0.42
CPNE1-219ENST00000440240 GEMIN7Q9H840 131 aaKnown RBP12.42□□□□□ -0.42
CPNE1-219ENST00000440240 F8VRH5 84 aa12.41□□□□□ -0.42
CPNE1-219ENST00000440240 XAGE1AQ9HD64 81 aa12.41□□□□□ -0.42
CPNE1-219ENST00000440240 CDKN2A-AS1Q9UH64 79 aa12.41□□□□□ -0.42
CPNE1-219ENST00000440240 TIMM17AQ99595 171 aa12.4□□□□□ -0.42
CPNE1-219ENST00000440240 RAB14P61106 215 aa12.39□□□□□ -0.43
CPNE1-219ENST00000440240 TOMM6Q96B49 74 aa12.38□□□□□ -0.43
CPNE1-219ENST00000440240 TP73-AS1Q9UF72 201 aa12.38□□□□□ -0.43
CPNE1-219ENST00000440240 CXCL5P42830 114 aa12.37□□□□□ -0.43
CPNE1-219ENST00000440240 PRR4Q16378 134 aa12.37□□□□□ -0.43
CPNE1-219ENST00000440240 ERASQ7Z444 233 aa12.36□□□□□ -0.43
CPNE1-219ENST00000440240 MRPL55Q7Z7F7 128 aaKnown RBP12.36□□□□□ -0.43
CPNE1-219ENST00000440240 RPL28P46779 137 aaKnown RBP12.34□□□□□ -0.43
CPNE1-219ENST00000440240 SCGB3A1Q96QR1 104 aa12.34□□□□□ -0.43
CPNE1-219ENST00000440240 LINC01549A6NIU2 74 aa12.33□□□□□ -0.44
CPNE1-219ENST00000440240 TINCRA0A1B0GVN0 87 aa12.32□□□□□ -0.44
CPNE1-219ENST00000440240 BCE1O60756 84 aa12.32□□□□□ -0.44
CPNE1-219ENST00000440240 PDZD11Q5EBL8 140 aa12.32□□□□□ -0.44
CPNE1-219ENST00000440240 KIAA1644Q3SXP7 199 aa12.31□□□□□ -0.44
CPNE1-219ENST00000440240 SMIM1B2RUZ4 78 aa12.3□□□□□ -0.44
CPNE1-219ENST00000440240 COX7B2Q8TF08 81 aa12.3□□□□□ -0.44
CPNE1-219ENST00000440240 TRAV9-1A0A075B6T8 112 aa12.29□□□□□ -0.44
CPNE1-219ENST00000440240 MUC2Q02817 5179 aa12.28□□□□□ -0.44
CPNE1-219ENST00000440240 IGLV5-45A0A087WSX0 123 aa12.28□□□□□ -0.44
CPNE1-219ENST00000440240 LINC00167Q96N53 147 aa12.28□□□□□ -0.44
CPNE1-219ENST00000440240 RPL37AP8A6NKH3 93 aa12.27□□□□□ -0.45
CPNE1-219ENST00000440240 CRYGAP11844 174 aa12.27□□□□□ -0.45
CPNE1-219ENST00000440240 ADCYAP1P18509 176 aa12.27□□□□□ -0.45
CPNE1-219ENST00000440240 CST9LQ9H4G1 147 aa12.27□□□□□ -0.45
CPNE1-219ENST00000440240 TSPAN13O95857 204 aa12.26□□□□□ -0.45
CPNE1-219ENST00000440240 LINC01546A6NGU7 62 aa12.25□□□□□ -0.45
CPNE1-219ENST00000440240 RAB5BP61020 215 aa12.25□□□□□ -0.45
CPNE1-219ENST00000440240 TYMSOSQ8TAI1 123 aa12.25□□□□□ -0.45
CPNE1-219ENST00000440240 MRPL18Q9H0U6 180 aaKnown RBP12.25□□□□□ -0.45
CPNE1-219ENST00000440240 A0A087X002 238 aa12.24□□□□□ -0.45
CPNE1-219ENST00000440240 CLLU1Q5K131 121 aa12.24□□□□□ -0.45
CPNE1-219ENST00000440240 GNB1LQ9BYB4 327 aa12.24□□□□□ -0.45
CPNE1-219ENST00000440240 IGLV5-37A0A075B6J1 123 aa12.23□□□□□ -0.45
CPNE1-219ENST00000440240 GAGE10A6NGK3 116 aa12.23□□□□□ -0.45
CPNE1-219ENST00000440240 PMVKQ15126 192 aa12.23□□□□□ -0.45
CPNE1-219ENST00000440240 NKAPP1Q8N9T2 125 aa12.23□□□□□ -0.45
CPNE1-219ENST00000440240 SPINK8P0C7L1 97 aa12.22□□□□□ -0.45
CPNE1-219ENST00000440240 S100PP25815 95 aa12.22□□□□□ -0.45
CPNE1-219ENST00000440240 H3BRM9 83 aa12.21□□□□□ -0.45
CPNE1-219ENST00000440240 ATP5LO75964 103 aa12.21□□□□□ -0.45
CPNE1-219ENST00000440240 UQCC3Q6UW78 93 aa12.21□□□□□ -0.45
CPNE1-219ENST00000440240 TMEM218A2RU14 115 aa12.2□□□□□ -0.46
CPNE1-219ENST00000440240 UBE2AP49459 152 aa12.2□□□□□ -0.46
CPNE1-219ENST00000440240 COX19Q49B96 90 aa12.19□□□□□ -0.46
CPNE1-219ENST00000440240 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
CPNE1-219ENST00000440240 SMCO4Q9NRQ5 59 aa12.19□□□□□ -0.46
CPNE1-219ENST00000440240 KRTAP13-1Q8IUC0 172 aa12.18□□□□□ -0.46
CPNE1-219ENST00000440240 A0A0U1RQV1 116 aa12.17□□□□□ -0.46
CPNE1-219ENST00000440240 ANAPC11Q9NYG5 84 aa12.16□□□□□ -0.46
CPNE1-219ENST00000440240 FABP9Q0Z7S8 132 aa12.15□□□□□ -0.46
CPNE1-219ENST00000440240 FAM229BQ4G0N7 80 aa12.15□□□□□ -0.46
CPNE1-219ENST00000440240 SEC11CQ9BY50 192 aa12.15□□□□□ -0.46
CPNE1-219ENST00000440240 IGKV2-28A0A075B6P5 120 aa12.14□□□□□ -0.47
CPNE1-219ENST00000440240 IGKV2D-28P01615 120 aa12.14□□□□□ -0.47
CPNE1-219ENST00000440240 PFN2P35080 140 aa12.14□□□□□ -0.47
CPNE1-219ENST00000440240 IGLV5-39A0A0G2JS06 123 aa12.13□□□□□ -0.47
CPNE1-219ENST00000440240 IGLC3P0DOY3 106 aa12.13□□□□□ -0.47
CPNE1-219ENST00000440240 NDUFA6P56556 154 aa12.12□□□□□ -0.47
CPNE1-219ENST00000440240 KRTAP13-2Q52LG2 175 aa12.12□□□□□ -0.47
CPNE1-219ENST00000440240 RPL24P83731 157 aaKnown RBP12.11□□□□□ -0.47
CPNE1-219ENST00000440240 COX17Q14061 63 aa12.11□□□□□ -0.47
CPNE1-219ENST00000440240 IGKV2D-26A0A0A0MRZ7 120 aa12.1□□□□□ -0.47
CPNE1-219ENST00000440240 SCO1O75880 301 aa12.1□□□□□ -0.47
CPNE1-219ENST00000440240 LINC00304Q8N9R0 145 aa12.1□□□□□ -0.47
CPNE1-219ENST00000440240 SND1-IT1Q9HBX3 110 aa12.1□□□□□ -0.47
CPNE1-219ENST00000440240 ERG28Q9UKR5 140 aa12.1□□□□□ -0.47
CPNE1-219ENST00000440240 VPREB1P12018 145 aa12.09□□□□□ -0.47
CPNE1-219ENST00000440240 ZNF22P17026 224 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-219ENST00000440240 CTAG1AP78358 180 aa12.08□□□□□ -0.48
CPNE1-219ENST00000440240 SFTA2Q6UW10 78 aa12.08□□□□□ -0.48
CPNE1-219ENST00000440240 FAM19A1Q7Z5A9 133 aa12.08□□□□□ -0.48
CPNE1-219ENST00000440240 TMEM126AQ9H061 195 aa12.08□□□□□ -0.48
CPNE1-219ENST00000440240 LINC00614P0C842 121 aa12.07□□□□□ -0.48
CPNE1-219ENST00000440240 PRLHP81277 87 aa12.07□□□□□ -0.48
CPNE1-219ENST00000440240 A0A096LNJ9 63 aa12.06□□□□□ -0.48
CPNE1-219ENST00000440240 TMEM238C9JI98 176 aa12.05□□□□□ -0.48
CPNE1-219ENST00000440240 HBDP02042 147 aa12.04□□□□□ -0.48
CPNE1-219ENST00000440240 RHEBQ15382 184 aa12.04□□□□□ -0.48
CPNE1-219ENST00000440240 ZNF625Q96I27 306 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-219ENST00000440240 RETNLBQ9BQ08 111 aa12.04□□□□□ -0.48
CPNE1-219ENST00000440240 RPS10P5Q9NQ39 176 aa12.04□□□□□ -0.48
CPNE1-219ENST00000440240 M0R378 163 aa12.03□□□□□ -0.48
CPNE1-219ENST00000440240 BAGE3Q86Y29 109 aa12.03□□□□□ -0.48
CPNE1-219ENST00000440240 PLEKHB2Q96CS7 222 aa12.03□□□□□ -0.48
CPNE1-219ENST00000440240 IFITM2Q01629 132 aa12.02□□□□□ -0.49
CPNE1-219ENST00000440240 C18orf32Q8TCD1 76 aa12.02□□□□□ -0.49
CPNE1-219ENST00000440240 URB1-AS1Q96HZ7 61 aa12.02□□□□□ -0.49
CPNE1-219ENST00000440240 TRAPPC1Q9Y5R8 145 aa12.02□□□□□ -0.49
CPNE1-219ENST00000440240 C10orf91Q5T1B1 145 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms