RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 CKS1BP61024 79 aa13.17□□□□□ -0.3
APTR-204ENST00000440088 CXCL5P42830 114 aa13.17□□□□□ -0.3
APTR-204ENST00000440088 Q9HAA7 133 aa13.17□□□□□ -0.3
APTR-204ENST00000440088 DNAH7Q8WXX0 4024 aa13.16□□□□□ -0.3
APTR-204ENST00000440088 MUSTN1Q8IVN3 82 aa13.16□□□□□ -0.3
APTR-204ENST00000440088 SMIM13P0DJ93 91 aa13.15□□□□□ -0.3
APTR-204ENST00000440088 RPL24P83731 157 aaKnown RBP13.15□□□□□ -0.3
APTR-204ENST00000440088 A0A0U1RRA0 63 aa13.15□□□□□ -0.3
APTR-204ENST00000440088 A0A1B0GV90 55 aa13.15□□□□□ -0.3
APTR-204ENST00000440088 TAX1BP3O14907 124 aa13.15□□□□□ -0.3
APTR-204ENST00000440088 SPAG11BQ08648 103 aa13.15□□□□□ -0.3
APTR-204ENST00000440088 C2orf82Q6UX34 121 aa13.15□□□□□ -0.3
APTR-204ENST00000440088 DAND5Q8N907 189 aa13.15□□□□□ -0.3
APTR-204ENST00000440088 IFITM1P13164 125 aa13.13□□□□□ -0.31
APTR-204ENST00000440088 LYSTQ99698 3801 aa13.13□□□□□ -0.31
APTR-204ENST00000440088 A0A1B0GWB2 263 aa13.12□□□□□ -0.31
APTR-204ENST00000440088 K7ERJ3 54 aa13.12□□□□□ -0.31
APTR-204ENST00000440088 NPC2P61916 151 aa13.12□□□□□ -0.31
APTR-204ENST00000440088 RMI2Q96E14 147 aa13.12□□□□□ -0.31
APTR-204ENST00000440088 A4D1N5 150 aa13.11□□□□□ -0.31
APTR-204ENST00000440088 COPS9Q8WXC6 57 aa13.11□□□□□ -0.31
APTR-204ENST00000440088 RAB37Q96AX2 223 aa13.11□□□□□ -0.31
APTR-204ENST00000440088 COX11Q9Y6N1 276 aa13.11□□□□□ -0.31
APTR-204ENST00000440088 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
APTR-204ENST00000440088 TENM2Q9NT68 2774 aa13.1□□□□□ -0.31
APTR-204ENST00000440088 LINC00158P58513 81 aa13.1□□□□□ -0.31
APTR-204ENST00000440088 LINC00308Q8TCZ7 52 aa13.09□□□□□ -0.31
APTR-204ENST00000440088 PLECQ15149 4684 aaKnown RBP13.09□□□□□ -0.31
APTR-204ENST00000440088 ZNF561-AS1K7EIQ3 104 aa13.08□□□□□ -0.31
APTR-204ENST00000440088 PFN2P35080 140 aa13.08□□□□□ -0.31
APTR-204ENST00000440088 C6orf223Q8N319 242 aa13.08□□□□□ -0.31
APTR-204ENST00000440088 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.08□□□□□ -0.32
APTR-204ENST00000440088 MIR7-3HGQ8N6C7 128 aa13.08□□□□□ -0.32
APTR-204ENST00000440088 LINC00526Q96FQ7 95 aa13.08□□□□□ -0.32
APTR-204ENST00000440088 CFC1BP0CG36 223 aa13.07□□□□□ -0.32
APTR-204ENST00000440088 CFC1P0CG37 223 aa13.07□□□□□ -0.32
APTR-204ENST00000440088 C15orf56Q8N910 161 aa13.07□□□□□ -0.32
APTR-204ENST00000440088 STARD9Q9P2P6 4700 aa13.07□□□□□ -0.32
APTR-204ENST00000440088 EIF4EBP3O60516 100 aaPredicted RBP13.06□□□□□ -0.32
APTR-204ENST00000440088 NTN5Q8WTR8 489 aaPredicted RBP13.06□□□□□ -0.32
APTR-204ENST00000440088 C9orf118A6NHY6 69 aa13.06□□□□□ -0.32
APTR-204ENST00000440088 HIGD2BQ4VC39 106 aa13.06□□□□□ -0.32
APTR-204ENST00000440088 MUC7Q8TAX7 377 aa13.06□□□□□ -0.32
APTR-204ENST00000440088 COX17Q14061 63 aa13.05□□□□□ -0.32
APTR-204ENST00000440088 UNQ6190/PRO20217Q6UXQ8 127 aa13.05□□□□□ -0.32
APTR-204ENST00000440088 KRTAP1-5Q9BYS1 174 aa13.05□□□□□ -0.32
APTR-204ENST00000440088 PPDPFQ9H3Y8 114 aa13.05□□□□□ -0.32
APTR-204ENST00000440088 DNAH1Q9P2D7 4330 aa13.04□□□□□ -0.32
APTR-204ENST00000440088 SOSTDC1Q6X4U4 206 aa13.04□□□□□ -0.32
APTR-204ENST00000440088 A0A0B4J2C4 111 aa13.03□□□□□ -0.32
APTR-204ENST00000440088 C10orf25Q5T742 122 aa13.03□□□□□ -0.32
APTR-204ENST00000440088 GVQW2A0A096LPI5 108 aaPredicted RBP13.03□□□□□ -0.32
APTR-204ENST00000440088 H3BUT2 72 aa13.03□□□□□ -0.32
APTR-204ENST00000440088 TGP01266 2768 aa13.02□□□□□ -0.32
APTR-204ENST00000440088 PRO1854Q9UHT4 67 aa13.02□□□□□ -0.33
APTR-204ENST00000440088 C9orf116Q5BN46 136 aaPredicted RBP13.01□□□□□ -0.33
APTR-204ENST00000440088 TTC32Q5I0X7 151 aa13.01□□□□□ -0.33
APTR-204ENST00000440088 C2orf48Q96LS8 159 aa13.01□□□□□ -0.33
APTR-204ENST00000440088 CAMK2N2Q96S95 79 aa13.01□□□□□ -0.33
APTR-204ENST00000440088 WWC2-AS2Q96NR7 200 aa13.01□□□□□ -0.33
APTR-204ENST00000440088 NAA38Q9BRA0 125 aaKnown RBP13.01□□□□□ -0.33
APTR-204ENST00000440088 PGPEP1Q9NXJ5 209 aa13□□□□□ -0.33
APTR-204ENST00000440088 TRBV30A0A0K0K1B3 111 aa12.99□□□□□ -0.33
APTR-204ENST00000440088 F8WDY8 70 aa12.99□□□□□ -0.33
APTR-204ENST00000440088 CASC10Q5T4H9 136 aa12.99□□□□□ -0.33
APTR-204ENST00000440088 NBDYA0A0U1RRE5 68 aa12.98□□□□□ -0.33
APTR-204ENST00000440088 C6orf48Q9UBA6 75 aa12.98□□□□□ -0.33
APTR-204ENST00000440088 USP17L23D6RBM5 183 aa12.98□□□□□ -0.33
APTR-204ENST00000440088 VAMP3Q15836 100 aa12.97□□□□□ -0.33
APTR-204ENST00000440088 A0A1W2PPM0 123 aa12.96□□□□□ -0.33
APTR-204ENST00000440088 SND1-IT1Q9HBX3 110 aa12.96□□□□□ -0.33
APTR-204ENST00000440088 TSPAN13O95857 204 aa12.96□□□□□ -0.34
APTR-204ENST00000440088 Q6ZRU5 148 aa12.96□□□□□ -0.34
APTR-204ENST00000440088 LOC107984156A0A0G2JMH3 177 aa12.95□□□□□ -0.34
APTR-204ENST00000440088 PSCAO43653 123 aa12.95□□□□□ -0.34
APTR-204ENST00000440088 ARL17AQ8IVW1 177 aa12.95□□□□□ -0.34
APTR-204ENST00000440088 FABP2P12104 132 aa12.94□□□□□ -0.34
APTR-204ENST00000440088 SYCNQ0VAF6 134 aa12.94□□□□□ -0.34
APTR-204ENST00000440088 VPS13DQ5THJ4 4388 aa12.92□□□□□ -0.34
APTR-204ENST00000440088 H7C2G1 150 aa12.91□□□□□ -0.34
APTR-204ENST00000440088 LECT2O14960 151 aa12.91□□□□□ -0.34
APTR-204ENST00000440088 Q1RN00 199 aa12.91□□□□□ -0.34
APTR-204ENST00000440088 RPL13AP40429 203 aaKnown RBP12.89□□□□□ -0.35
APTR-204ENST00000440088 CARD19Q96LW7 228 aa12.89□□□□□ -0.35
APTR-204ENST00000440088 IGKV2-28A0A075B6P5 120 aa12.88□□□□□ -0.35
APTR-204ENST00000440088 TRAV13-2A0A0B4J235 113 aa12.88□□□□□ -0.35
APTR-204ENST00000440088 IGKV2D-28P01615 120 aa12.88□□□□□ -0.35
APTR-204ENST00000440088 GAGE10A6NGK3 116 aa12.88□□□□□ -0.35
APTR-204ENST00000440088 NDUFC2-KCTD14E9PQ53 114 aa12.88□□□□□ -0.35
APTR-204ENST00000440088 SPCS1Q9Y6A9 102 aa12.88□□□□□ -0.35
APTR-204ENST00000440088 NDUFC2O95298 119 aa12.87□□□□□ -0.35
APTR-204ENST00000440088 UBE2V1Q13404 147 aa12.87□□□□□ -0.35
APTR-204ENST00000440088 GTF2H5Q6ZYL4 71 aa12.87□□□□□ -0.35
APTR-204ENST00000440088 M0R2N4 97 aa12.86□□□□□ -0.35
APTR-204ENST00000440088 SLPIP03973 132 aa12.86□□□□□ -0.35
APTR-204ENST00000440088 PSMB2P49721 201 aa12.86□□□□□ -0.35
APTR-204ENST00000440088 RNF151Q2KHN1 245 aa12.86□□□□□ -0.35
APTR-204ENST00000440088 WFDC2Q14508 124 aa12.86□□□□□ -0.35
APTR-204ENST00000440088 LYRM7Q5U5X0 104 aa12.86□□□□□ -0.35
APTR-204ENST00000440088 LINC00337Q8N6G1 96 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms