RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 BOD1L2Q8IYS8 172 aa7.84□□□□□ -1.15
AC009404.1-202ENST00000439955 PRO1933Q9H354 126 aa7.84□□□□□ -1.15
AC009404.1-202ENST00000439955 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.15
AC009404.1-202ENST00000439955 GAGE12HA6NDE8 117 aa7.83□□□□□ -1.16
AC009404.1-202ENST00000439955 LGALS3P17931 250 aaKnown RBP7.83□□□□□ -1.16
AC009404.1-202ENST00000439955 KRTAP26-1Q6PEX3 210 aa7.83□□□□□ -1.16
AC009404.1-202ENST00000439955 C14orf144Q96I85 54 aa7.83□□□□□ -1.16
AC009404.1-202ENST00000439955 LRP1BQ9NZR2 4599 aa7.83□□□□□ -1.16
AC009404.1-202ENST00000439955 APOMO95445 188 aa7.82□□□□□ -1.16
AC009404.1-202ENST00000439955 SFTA2Q6UW10 78 aa7.82□□□□□ -1.16
AC009404.1-202ENST00000439955 C5orf38Q86SI9 138 aa7.82□□□□□ -1.16
AC009404.1-202ENST00000439955 PCP2Q8IVA1 136 aa7.82□□□□□ -1.16
AC009404.1-202ENST00000439955 COX11Q9Y6N1 276 aa7.82□□□□□ -1.16
AC009404.1-202ENST00000439955 IGHV3-64A0A075B6Q5 118 aa7.81□□□□□ -1.16
AC009404.1-202ENST00000439955 MYMXA0A1B0GTQ4 84 aa7.81□□□□□ -1.16
AC009404.1-202ENST00000439955 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
AC009404.1-202ENST00000439955 Q6ZR54 194 aa7.81□□□□□ -1.16
AC009404.1-202ENST00000439955 Q8IZM0 81 aa7.81□□□□□ -1.16
AC009404.1-202ENST00000439955 IGKV2D-24A0A075B6R9 120 aa7.8□□□□□ -1.16
AC009404.1-202ENST00000439955 NBDYA0A0U1RRE5 68 aa7.8□□□□□ -1.16
AC009404.1-202ENST00000439955 ZNF815PA8K554 130 aa7.8□□□□□ -1.16
AC009404.1-202ENST00000439955 MALP21145 153 aa7.8□□□□□ -1.16
AC009404.1-202ENST00000439955 DDTP30046 118 aa7.8□□□□□ -1.16
AC009404.1-202ENST00000439955 COX7B2Q8TF08 81 aa7.8□□□□□ -1.16
AC009404.1-202ENST00000439955 HIGD1BQ9P298 99 aa7.8□□□□□ -1.16
AC009404.1-202ENST00000439955 NDUFA1O15239 70 aa7.79□□□□□ -1.16
AC009404.1-202ENST00000439955 C1orf134Q5TEV5 83 aa7.79□□□□□ -1.16
AC009404.1-202ENST00000439955 TM2D2Q9BX73 214 aa7.79□□□□□ -1.16
AC009404.1-202ENST00000439955 KRTAP1-5Q9BYS1 174 aa7.79□□□□□ -1.16
AC009404.1-202ENST00000439955 TTTY13Q9BZ97 58 aa7.79□□□□□ -1.16
AC009404.1-202ENST00000439955 Q9HAA7 133 aa7.79□□□□□ -1.16
AC009404.1-202ENST00000439955 NDUFA12Q9UI09 145 aa7.79□□□□□ -1.16
AC009404.1-202ENST00000439955 CXCL5P42830 114 aa7.78□□□□□ -1.16
AC009404.1-202ENST00000439955 HNRNPA3P51991 378 aaKnown RBP7.78□□□□□ -1.16
AC009404.1-202ENST00000439955 HERV-K104P63124 156 aa7.78□□□□□ -1.16
AC009404.1-202ENST00000439955 ORAOV1Q8WV07 137 aa7.78□□□□□ -1.16
AC009404.1-202ENST00000439955 DNAH5Q8TE73 4624 aa7.78□□□□□ -1.16
AC009404.1-202ENST00000439955 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.17
AC009404.1-202ENST00000439955 PRSS2P07478 247 aa7.77□□□□□ -1.17
AC009404.1-202ENST00000439955 CFAP161Q6P656 301 aa7.77□□□□□ -1.17
AC009404.1-202ENST00000439955 C2orf91Q6ZV80 131 aa7.77□□□□□ -1.17
AC009404.1-202ENST00000439955 ZNF625Q96I27 306 aaPredicted RBP7.77□□□□□ -1.17
AC009404.1-202ENST00000439955 F8WDY8 70 aa7.76□□□□□ -1.17
AC009404.1-202ENST00000439955 KIAA0087Q14695 138 aa7.76□□□□□ -1.17
AC009404.1-202ENST00000439955 C6orf226Q5I0X4 101 aa7.76□□□□□ -1.17
AC009404.1-202ENST00000439955 TOMM7Q9P0U1 55 aa7.76□□□□□ -1.17
AC009404.1-202ENST00000439955 TP73-AS1Q9UF72 201 aa7.76□□□□□ -1.17
AC009404.1-202ENST00000439955 A0A0J9YXY3 114 aa7.75□□□□□ -1.17
AC009404.1-202ENST00000439955 PCP4L1A6NKN8 68 aa7.75□□□□□ -1.17
AC009404.1-202ENST00000439955 TIMM17BO60830 172 aa7.75□□□□□ -1.17
AC009404.1-202ENST00000439955 INAFM2P0DMQ5 153 aa7.75□□□□□ -1.17
AC009404.1-202ENST00000439955 SPAG11BQ08648 103 aa7.75□□□□□ -1.17
AC009404.1-202ENST00000439955 SCGB1D4Q6XE38 83 aa7.75□□□□□ -1.17
AC009404.1-202ENST00000439955 GVQW2A0A096LPI5 108 aaPredicted RBP7.74□□□□□ -1.17
AC009404.1-202ENST00000439955 TMEM238C9JI98 176 aa7.74□□□□□ -1.17
AC009404.1-202ENST00000439955 C15orf56Q8N910 161 aa7.74□□□□□ -1.17
AC009404.1-202ENST00000439955 SPANXB1Q9NS25 103 aaPredicted RBP7.74□□□□□ -1.17
AC009404.1-202ENST00000439955 LINC00587B1AMM8 73 aa7.73□□□□□ -1.17
AC009404.1-202ENST00000439955 EPM2AB3EWF7 344 aa7.73□□□□□ -1.17
AC009404.1-202ENST00000439955 CKS1BP61024 79 aa7.73□□□□□ -1.17
AC009404.1-202ENST00000439955 TAL2Q16559 108 aa7.73□□□□□ -1.17
AC009404.1-202ENST00000439955 C2orf48Q96LS8 159 aa7.73□□□□□ -1.17
AC009404.1-202ENST00000439955 ZNF561-AS1K7EIQ3 104 aa7.72□□□□□ -1.17
AC009404.1-202ENST00000439955 HSD52Q0P140 79 aa7.72□□□□□ -1.17
AC009404.1-202ENST00000439955 CIRBPQ14011 172 aaKnown RBP7.72□□□□□ -1.17
AC009404.1-202ENST00000439955 Q6ZVH6 145 aa7.72□□□□□ -1.17
AC009404.1-202ENST00000439955 NTN5Q8WTR8 489 aaPredicted RBP7.72□□□□□ -1.17
AC009404.1-202ENST00000439955 PSCAO43653 123 aa7.71□□□□□ -1.18
AC009404.1-202ENST00000439955 CTAG1AP78358 180 aa7.71□□□□□ -1.18
AC009404.1-202ENST00000439955 Q6ZRN7 208 aaPredicted RBP7.71□□□□□ -1.18
AC009404.1-202ENST00000439955 USP17L23D6RBM5 183 aa7.7□□□□□ -1.18
AC009404.1-202ENST00000439955 LITAFQ99732 161 aa7.7□□□□□ -1.18
AC009404.1-202ENST00000439955 SPANXDQ9BXN6 97 aa7.7□□□□□ -1.18
AC009404.1-202ENST00000439955 SPANXCQ9NY87 97 aa7.7□□□□□ -1.18
AC009404.1-202ENST00000439955 MYCBP2O75592 4640 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 TRBV30A0A0K0K1B3 111 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 M0R143 59 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 GCSHP23434 173 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 COX17Q14061 63 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 HIGD2BQ4VC39 106 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 C14orf177Q52M58 125 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 C2orf82Q6UX34 121 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 C6orf223Q8N319 242 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 HIST1H4GQ99525 98 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 PPDPFQ9H3Y8 114 aa7.69□□□□□ -1.18
AC009404.1-202ENST00000439955 SRSF9Q13242 221 aaKnown RBP eCLIP7.68□□□□□ -1.18
AC009404.1-202ENST00000439955 COPS9Q8WXC6 57 aa7.68□□□□□ -1.18
AC009404.1-202ENST00000439955 CAMK2N2Q96S95 79 aa7.68□□□□□ -1.18
AC009404.1-202ENST00000439955 ERG28Q9UKR5 140 aa7.68□□□□□ -1.18
AC009404.1-202ENST00000439955 IFITM1P13164 125 aa7.67□□□□□ -1.18
AC009404.1-202ENST00000439955 PTTG1IPP53801 180 aa7.67□□□□□ -1.18
AC009404.1-202ENST00000439955 KRTAP10-2P60368 255 aa7.67□□□□□ -1.18
AC009404.1-202ENST00000439955 RNF151Q2KHN1 245 aa7.67□□□□□ -1.18
AC009404.1-202ENST00000439955 CEND1Q8N111 149 aa7.67□□□□□ -1.18
AC009404.1-202ENST00000439955 SMIM13P0DJ93 91 aa7.66□□□□□ -1.18
AC009404.1-202ENST00000439955 SYCNQ0VAF6 134 aa7.66□□□□□ -1.18
AC009404.1-202ENST00000439955 UNQ6190/PRO20217Q6UXQ8 127 aa7.66□□□□□ -1.18
AC009404.1-202ENST00000439955 LINC00526Q96FQ7 95 aa7.66□□□□□ -1.18
AC009404.1-202ENST00000439955 LRCOL1A6NCL2 159 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms