RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 DNAH8Q96JB1 4490 aa11.42□□□□□ -0.58
CCDC188-201ENST00000439765 GVQW2A0A096LPI5 108 aaPredicted RBP11.42□□□□□ -0.58
CCDC188-201ENST00000439765 SLPIP03973 132 aa11.42□□□□□ -0.58
CCDC188-201ENST00000439765 INAFM2P0DMQ5 153 aa11.42□□□□□ -0.58
CCDC188-201ENST00000439765 MALP21145 153 aa11.42□□□□□ -0.58
CCDC188-201ENST00000439765 VPS13BQ7Z7G8 4022 aa11.42□□□□□ -0.58
CCDC188-201ENST00000439765 TMEM223A0PJW6 202 aa11.41□□□□□ -0.58
CCDC188-201ENST00000439765 SPINK8P0C7L1 97 aa11.41□□□□□ -0.58
CCDC188-201ENST00000439765 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
CCDC188-201ENST00000439765 C9orf163Q8N9P6 203 aa11.41□□□□□ -0.58
CCDC188-201ENST00000439765 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.4□□□□□ -0.58
CCDC188-201ENST00000439765 IGHV1-58A0A0C4DH39 117 aa11.4□□□□□ -0.58
CCDC188-201ENST00000439765 APOMO95445 188 aa11.4□□□□□ -0.58
CCDC188-201ENST00000439765 SMR3BP02814 79 aaPredicted RBP11.4□□□□□ -0.58
CCDC188-201ENST00000439765 PYY3Q5JQD4 70 aa11.4□□□□□ -0.58
CCDC188-201ENST00000439765 IGHV3-64A0A075B6Q5 118 aa11.39□□□□□ -0.59
CCDC188-201ENST00000439765 SMIM1B2RUZ4 78 aa11.39□□□□□ -0.59
CCDC188-201ENST00000439765 LINC00526Q96FQ7 95 aa11.39□□□□□ -0.59
CCDC188-201ENST00000439765 SCXQ7RTU7 201 aa11.38□□□□□ -0.59
CCDC188-201ENST00000439765 IGLV5-39A0A0G2JS06 123 aa11.38□□□□□ -0.59
CCDC188-201ENST00000439765 FAM229AH3BQW9 127 aa11.38□□□□□ -0.59
CCDC188-201ENST00000439765 STPG4Q8N801 248 aa11.38□□□□□ -0.59
CCDC188-201ENST00000439765 HERC1Q15751 4861 aa11.37□□□□□ -0.59
CCDC188-201ENST00000439765 HERVK_113P61574 105 aa11.37□□□□□ -0.59
CCDC188-201ENST00000439765 ORAOV1Q8WV07 137 aa11.37□□□□□ -0.59
CCDC188-201ENST00000439765 MYCBP2O75592 4640 aa11.36□□□□□ -0.59
CCDC188-201ENST00000439765 ZNF561-AS1K7EIQ3 104 aa11.35□□□□□ -0.59
CCDC188-201ENST00000439765 E9PLD3 99 aa11.34□□□□□ -0.59
CCDC188-201ENST00000439765 MAJINQ3KP22 176 aa11.34□□□□□ -0.59
CCDC188-201ENST00000439765 SDIM1Q6ZPB5 146 aa11.34□□□□□ -0.59
CCDC188-201ENST00000439765 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.34□□□□□ -0.59
CCDC188-201ENST00000439765 HSBP1L1C9JCN9 74 aa11.33□□□□□ -0.6
CCDC188-201ENST00000439765 SPAG11BQ08648 103 aa11.33□□□□□ -0.6
CCDC188-201ENST00000439765 KIAA0087Q14695 138 aa11.33□□□□□ -0.6
CCDC188-201ENST00000439765 Q8IZM0 81 aa11.33□□□□□ -0.6
CCDC188-201ENST00000439765 COX7B2Q8TF08 81 aa11.33□□□□□ -0.6
CCDC188-201ENST00000439765 TOMM7Q9P0U1 55 aa11.33□□□□□ -0.6
CCDC188-201ENST00000439765 PANO1I0J062 215 aa11.32□□□□□ -0.6
CCDC188-201ENST00000439765 LEPROTO15243 131 aa11.32□□□□□ -0.6
CCDC188-201ENST00000439765 CHTF8P0CG12 524 aa11.32□□□□□ -0.6
CCDC188-201ENST00000439765 ANKRD39Q53RE8 183 aa11.32□□□□□ -0.6
CCDC188-201ENST00000439765 CIRBP-AS1Q8TBR5 109 aa11.32□□□□□ -0.6
CCDC188-201ENST00000439765 CARD19Q96LW7 228 aa11.32□□□□□ -0.6
CCDC188-201ENST00000439765 PRSS2P07478 247 aa11.32□□□□□ -0.6
CCDC188-201ENST00000439765 C6orf226Q5I0X4 101 aa11.32□□□□□ -0.6
CCDC188-201ENST00000439765 PLEKHB2Q96CS7 222 aa11.32□□□□□ -0.6
CCDC188-201ENST00000439765 IGKV2D-26A0A0A0MRZ7 120 aa11.3□□□□□ -0.6
CCDC188-201ENST00000439765 SYCNQ0VAF6 134 aa11.3□□□□□ -0.6
CCDC188-201ENST00000439765 C2orf48Q96LS8 159 aa11.3□□□□□ -0.6
CCDC188-201ENST00000439765 J3QQQ9 107 aa11.29□□□□□ -0.6
CCDC188-201ENST00000439765 TSPEAR-AS2P59090 65 aa11.29□□□□□ -0.6
CCDC188-201ENST00000439765 CAMK2N2Q96S95 79 aa11.29□□□□□ -0.6
CCDC188-201ENST00000439765 VAMP8Q9BV40 100 aa11.29□□□□□ -0.6
CCDC188-201ENST00000439765 SMIM6P0DI80 62 aa11.28□□□□□ -0.6
CCDC188-201ENST00000439765 Q6ZRU5 148 aa11.28□□□□□ -0.6
CCDC188-201ENST00000439765 LINC00528Q8N1L1 170 aa11.28□□□□□ -0.6
CCDC188-201ENST00000439765 IGKV2-24A0A0C4DH68 120 aa11.27□□□□□ -0.6
CCDC188-201ENST00000439765 F8WDY8 70 aa11.27□□□□□ -0.6
CCDC188-201ENST00000439765 CXCL5P42830 114 aa11.27□□□□□ -0.6
CCDC188-201ENST00000439765 CKS1BP61024 79 aa11.27□□□□□ -0.6
CCDC188-201ENST00000439765 PAM16Q9Y3D7 125 aa11.27□□□□□ -0.6
CCDC188-201ENST00000439765 PLA2G1BP04054 148 aaKnown RBP11.26□□□□□ -0.61
CCDC188-201ENST00000439765 LGALS3P17931 250 aaKnown RBP11.26□□□□□ -0.61
CCDC188-201ENST00000439765 NMUP48645 174 aa11.26□□□□□ -0.61
CCDC188-201ENST00000439765 C2orf82Q6UX34 121 aa11.26□□□□□ -0.61
CCDC188-201ENST00000439765 SPACA4Q8TDM5 124 aa11.26□□□□□ -0.61
CCDC188-201ENST00000439765 A0A096LNI7 61 aa11.25□□□□□ -0.61
CCDC188-201ENST00000439765 CIRBPQ14011 172 aaKnown RBP11.25□□□□□ -0.61
CCDC188-201ENST00000439765 SPATA45Q537H7 98 aa11.25□□□□□ -0.61
CCDC188-201ENST00000439765 NDUFA1O15239 70 aa11.25□□□□□ -0.61
CCDC188-201ENST00000439765 S100A12P80511 92 aa11.25□□□□□ -0.61
CCDC188-201ENST00000439765 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
CCDC188-201ENST00000439765 DPH3Q96FX2 82 aa11.25□□□□□ -0.61
CCDC188-201ENST00000439765 NDUFA12Q9UI09 145 aa11.25□□□□□ -0.61
CCDC188-201ENST00000439765 C10orf25Q5T742 122 aa11.24□□□□□ -0.61
CCDC188-201ENST00000439765 SFTA2Q6UW10 78 aa11.24□□□□□ -0.61
CCDC188-201ENST00000439765 ZNF625Q96I27 306 aaPredicted RBP11.24□□□□□ -0.61
CCDC188-201ENST00000439765 MYMXA0A1B0GTQ4 84 aa11.23□□□□□ -0.61
CCDC188-201ENST00000439765 PCP2Q8IVA1 136 aa11.23□□□□□ -0.61
CCDC188-201ENST00000439765 TTTY13Q9BZ97 58 aa11.23□□□□□ -0.61
CCDC188-201ENST00000439765 A0A087WYN8 130 aa11.22□□□□□ -0.61
CCDC188-201ENST00000439765 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
CCDC188-201ENST00000439765 LINC00518Q8N0U6 118 aa11.21□□□□□ -0.61
CCDC188-201ENST00000439765 TRBV30A0A0K0K1B3 111 aa11.2□□□□□ -0.62
CCDC188-201ENST00000439765 ZNF815PA8K554 130 aa11.2□□□□□ -0.62
CCDC188-201ENST00000439765 HERV-K104P63124 156 aa11.2□□□□□ -0.62
CCDC188-201ENST00000439765 C6orf48Q9UBA6 75 aa11.2□□□□□ -0.62
CCDC188-201ENST00000439765 LOC107984640A0A0U1RRK4 108 aa11.19□□□□□ -0.62
CCDC188-201ENST00000439765 COX8AP10176 69 aa11.19□□□□□ -0.62
CCDC188-201ENST00000439765 RPL18AQ02543 176 aaKnown RBP11.19□□□□□ -0.62
CCDC188-201ENST00000439765 RNF151Q2KHN1 245 aa11.19□□□□□ -0.62
CCDC188-201ENST00000439765 C12orf57Q99622 126 aa11.19□□□□□ -0.62
CCDC188-201ENST00000439765 GAGE2BQ13066 116 aa11.19□□□□□ -0.62
CCDC188-201ENST00000439765 C14orf144Q96I85 54 aa11.19□□□□□ -0.62
CCDC188-201ENST00000439765 PTTG1IPP53801 180 aa11.18□□□□□ -0.62
CCDC188-201ENST00000439765 KRTAP10-4P60372 401 aaPredicted RBP11.18□□□□□ -0.62
CCDC188-201ENST00000439765 C9orf116Q5BN46 136 aaPredicted RBP11.18□□□□□ -0.62
CCDC188-201ENST00000439765 BOD1L2Q8IYS8 172 aa11.18□□□□□ -0.62
CCDC188-201ENST00000439765 PLAC8Q9NZF1 115 aa11.18□□□□□ -0.62
CCDC188-201ENST00000439765 LINC00474Q9P2X8 69 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms