RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 DIRC1Q969H9 104 aa12.34□□□□□ -0.43
NCKIPSD-206ENST00000439518 TOMM7Q9P0U1 55 aa12.34□□□□□ -0.43
NCKIPSD-206ENST00000439518 ERASQ7Z444 233 aa12.33□□□□□ -0.44
NCKIPSD-206ENST00000439518 ALKBH7Q9BT30 221 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-206ENST00000439518 LINC01546A6NGU7 62 aa12.32□□□□□ -0.44
NCKIPSD-206ENST00000439518 SEC11CQ9BY50 192 aa12.32□□□□□ -0.44
NCKIPSD-206ENST00000439518 GNB1LQ9BYB4 327 aa12.32□□□□□ -0.44
NCKIPSD-206ENST00000439518 SCGB3A1Q96QR1 104 aa12.31□□□□□ -0.44
NCKIPSD-206ENST00000439518 GEMIN7Q9H840 131 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-206ENST00000439518 H0Y9J4 135 aa12.3□□□□□ -0.44
NCKIPSD-206ENST00000439518 UBE2BP63146 152 aa12.3□□□□□ -0.44
NCKIPSD-206ENST00000439518 S100PP25815 95 aa12.29□□□□□ -0.44
NCKIPSD-206ENST00000439518 F8VRH5 84 aa12.28□□□□□ -0.44
NCKIPSD-206ENST00000439518 LINC01549A6NIU2 74 aa12.27□□□□□ -0.45
NCKIPSD-206ENST00000439518 LINC00469Q8N7U9 141 aa12.27□□□□□ -0.45
NCKIPSD-206ENST00000439518 PRR26Q8N8Z3 221 aa12.27□□□□□ -0.45
NCKIPSD-206ENST00000439518 TINCRA0A1B0GVN0 87 aa12.26□□□□□ -0.45
NCKIPSD-206ENST00000439518 SMIM1B2RUZ4 78 aa12.26□□□□□ -0.45
NCKIPSD-206ENST00000439518 XAGE1AQ9HD64 81 aa12.26□□□□□ -0.45
NCKIPSD-206ENST00000439518 IGLV5-45A0A087WSX0 123 aa12.25□□□□□ -0.45
NCKIPSD-206ENST00000439518 CXCL5P42830 114 aa12.25□□□□□ -0.45
NCKIPSD-206ENST00000439518 COX19Q49B96 90 aa12.25□□□□□ -0.45
NCKIPSD-206ENST00000439518 C10orf91Q5T1B1 145 aa12.25□□□□□ -0.45
NCKIPSD-206ENST00000439518 CST9LQ9H4G1 147 aa12.25□□□□□ -0.45
NCKIPSD-206ENST00000439518 KRTAP1-4P0C5Y4 121 aa12.24□□□□□ -0.45
NCKIPSD-206ENST00000439518 PDZD11Q5EBL8 140 aa12.24□□□□□ -0.45
NCKIPSD-206ENST00000439518 C22orf24Q9Y442 160 aa12.24□□□□□ -0.45
NCKIPSD-206ENST00000439518 COMMD7Q86VX2 200 aa12.23□□□□□ -0.45
NCKIPSD-206ENST00000439518 MRPL18Q9H0U6 180 aaKnown RBP12.22□□□□□ -0.45
NCKIPSD-206ENST00000439518 RNF213Q63HN8 5207 aa12.21□□□□□ -0.45
NCKIPSD-206ENST00000439518 IGLV1-50A0A075B6I6 118 aa12.21□□□□□ -0.45
NCKIPSD-206ENST00000439518 FABP9Q0Z7S8 132 aa12.21□□□□□ -0.45
NCKIPSD-206ENST00000439518 LBHQ53QV2 105 aaPredicted RBP12.21□□□□□ -0.45
NCKIPSD-206ENST00000439518 FA2HQ7L5A8 372 aa12.21□□□□□ -0.45
NCKIPSD-206ENST00000439518 COX7B2Q8TF08 81 aa12.21□□□□□ -0.45
NCKIPSD-206ENST00000439518 CARHSP1Q9Y2V2 147 aaKnown RBP12.21□□□□□ -0.45
NCKIPSD-206ENST00000439518 PMVKQ15126 192 aa12.2□□□□□ -0.46
NCKIPSD-206ENST00000439518 RHEBQ15382 184 aa12.2□□□□□ -0.46
NCKIPSD-206ENST00000439518 TP73-AS1Q9UF72 201 aa12.2□□□□□ -0.46
NCKIPSD-206ENST00000439518 ZNF861PO60384 105 aa12.18□□□□□ -0.46
NCKIPSD-206ENST00000439518 RPS10P5Q9NQ39 176 aa12.18□□□□□ -0.46
NCKIPSD-206ENST00000439518 SMCO4Q9NRQ5 59 aa12.18□□□□□ -0.46
NCKIPSD-206ENST00000439518 NUPR1O60356 82 aa12.17□□□□□ -0.46
NCKIPSD-206ENST00000439518 SPINK8P0C7L1 97 aa12.17□□□□□ -0.46
NCKIPSD-206ENST00000439518 MRPL55Q7Z7F7 128 aaKnown RBP12.17□□□□□ -0.46
NCKIPSD-206ENST00000439518 A0A096LNJ9 63 aa12.16□□□□□ -0.46
NCKIPSD-206ENST00000439518 URB1-AS1Q96HZ7 61 aa12.14□□□□□ -0.47
NCKIPSD-206ENST00000439518 IGLC3P0DOY3 106 aa12.13□□□□□ -0.47
NCKIPSD-206ENST00000439518 IGLV5-39A0A0G2JS06 123 aa12.12□□□□□ -0.47
NCKIPSD-206ENST00000439518 H3BRM9 83 aa12.12□□□□□ -0.47
NCKIPSD-206ENST00000439518 RPL13AP40429 203 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-206ENST00000439518 C18orf32Q8TCD1 76 aa12.12□□□□□ -0.47
NCKIPSD-206ENST00000439518 LINC00167Q96N53 147 aa12.12□□□□□ -0.47
NCKIPSD-206ENST00000439518 IGLV5-37A0A075B6J1 123 aa12.11□□□□□ -0.47
NCKIPSD-206ENST00000439518 BCE1O60756 84 aa12.11□□□□□ -0.47
NCKIPSD-206ENST00000439518 RAB5BP61020 215 aa12.11□□□□□ -0.47
NCKIPSD-206ENST00000439518 LINC00614P0C842 121 aa12.1□□□□□ -0.47
NCKIPSD-206ENST00000439518 TRAPPC1Q9Y5R8 145 aa12.1□□□□□ -0.47
NCKIPSD-206ENST00000439518 RPL37AP8A6NKH3 93 aa12.09□□□□□ -0.47
NCKIPSD-206ENST00000439518 ATP5LO75964 103 aa12.09□□□□□ -0.47
NCKIPSD-206ENST00000439518 HBDP02042 147 aa12.08□□□□□ -0.48
NCKIPSD-206ENST00000439518 ZNF22P17026 224 aaPredicted RBP12.08□□□□□ -0.48
NCKIPSD-206ENST00000439518 RPL28P46779 137 aaKnown RBP12.08□□□□□ -0.48
NCKIPSD-206ENST00000439518 NDUFA6P56556 154 aa12.08□□□□□ -0.48
NCKIPSD-206ENST00000439518 GAGE10A6NGK3 116 aa12.07□□□□□ -0.48
NCKIPSD-206ENST00000439518 PMCHL1Q16048 86 aa12.06□□□□□ -0.48
NCKIPSD-206ENST00000439518 APOC3P02656 99 aa12.04□□□□□ -0.48
NCKIPSD-206ENST00000439518 PFN2P35080 140 aa12.04□□□□□ -0.48
NCKIPSD-206ENST00000439518 NKAPP1Q8N9T2 125 aa12.04□□□□□ -0.48
NCKIPSD-206ENST00000439518 LPAP08519 4548 aa12.04□□□□□ -0.48
NCKIPSD-206ENST00000439518 KRTAP13-1Q8IUC0 172 aa12.03□□□□□ -0.48
NCKIPSD-206ENST00000439518 C11orf86A6NJI1 115 aa12.02□□□□□ -0.49
NCKIPSD-206ENST00000439518 BAGE3Q86Y29 109 aa12.02□□□□□ -0.49
NCKIPSD-206ENST00000439518 ERG28Q9UKR5 140 aa12.02□□□□□ -0.49
NCKIPSD-206ENST00000439518 A0A087X002 238 aa12.01□□□□□ -0.49
NCKIPSD-206ENST00000439518 SCO1O75880 301 aa12.01□□□□□ -0.49
NCKIPSD-206ENST00000439518 SNAPINO95295 136 aa12.01□□□□□ -0.49
NCKIPSD-206ENST00000439518 SVBPQ8N300 66 aa12.01□□□□□ -0.49
NCKIPSD-206ENST00000439518 SND1-IT1Q9HBX3 110 aa12.01□□□□□ -0.49
NCKIPSD-206ENST00000439518 VPREB1P12018 145 aa12□□□□□ -0.49
NCKIPSD-206ENST00000439518 COX17Q14061 63 aa12□□□□□ -0.49
NCKIPSD-206ENST00000439518 YPEL4Q96NS1 127 aa11.99□□□□□ -0.49
NCKIPSD-206ENST00000439518 IGKV2-28A0A075B6P5 120 aa11.98□□□□□ -0.49
NCKIPSD-206ENST00000439518 IGKV2D-28P01615 120 aa11.98□□□□□ -0.49
NCKIPSD-206ENST00000439518 CRYGAP11844 174 aa11.98□□□□□ -0.49
NCKIPSD-206ENST00000439518 NDUFA5Q16718 116 aa11.98□□□□□ -0.49
NCKIPSD-206ENST00000439518 TMEM170BQ5T4T1 132 aa11.98□□□□□ -0.49
NCKIPSD-206ENST00000439518 SFTA2Q6UW10 78 aa11.97□□□□□ -0.49
NCKIPSD-206ENST00000439518 ZNF625Q96I27 306 aaPredicted RBP11.97□□□□□ -0.49
NCKIPSD-206ENST00000439518 UBE2AP49459 152 aa11.96□□□□□ -0.49
NCKIPSD-206ENST00000439518 RPL24P83731 157 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-206ENST00000439518 PRR4Q16378 134 aa11.95□□□□□ -0.5
NCKIPSD-206ENST00000439518 Q8NDZ9 215 aa11.95□□□□□ -0.5
NCKIPSD-206ENST00000439518 ANAPC11Q9NYG5 84 aa11.95□□□□□ -0.5
NCKIPSD-206ENST00000439518 CHTOPQ9Y3Y2 248 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-206ENST00000439518 TYMSOSQ8TAI1 123 aa11.94□□□□□ -0.5
NCKIPSD-206ENST00000439518 CHCHD1Q96BP2 118 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-206ENST00000439518 TRAV12-1A0A0B4J245 112 aa11.92□□□□□ -0.5
NCKIPSD-206ENST00000439518 TMEM238C9JI98 176 aa11.92□□□□□ -0.5
NCKIPSD-206ENST00000439518 TSPAN13O95857 204 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms