RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 S100PP25815 95 aa11.2□□□□□ -0.62
AC004540.1-201ENST00000439120 UQCC3Q6UW78 93 aa11.2□□□□□ -0.62
AC004540.1-201ENST00000439120 LINC00469Q8N7U9 141 aa11.2□□□□□ -0.62
AC004540.1-201ENST00000439120 PRR26Q8N8Z3 221 aa11.2□□□□□ -0.62
AC004540.1-201ENST00000439120 SCGB3A1Q96QR1 104 aa11.2□□□□□ -0.62
AC004540.1-201ENST00000439120 ERASQ7Z444 233 aa11.19□□□□□ -0.62
AC004540.1-201ENST00000439120 F8VRH5 84 aa11.18□□□□□ -0.62
AC004540.1-201ENST00000439120 ADCYAP1P18509 176 aa11.18□□□□□ -0.62
AC004540.1-201ENST00000439120 LRP2P98164 4655 aa11.17□□□□□ -0.62
AC004540.1-201ENST00000439120 TMEM218A2RU14 115 aa11.17□□□□□ -0.62
AC004540.1-201ENST00000439120 CXCL5P42830 114 aa11.17□□□□□ -0.62
AC004540.1-201ENST00000439120 XAGE1AQ9HD64 81 aa11.17□□□□□ -0.62
AC004540.1-201ENST00000439120 LINC01549A6NIU2 74 aa11.16□□□□□ -0.62
AC004540.1-201ENST00000439120 LBHQ53QV2 105 aaPredicted RBP11.16□□□□□ -0.62
AC004540.1-201ENST00000439120 IGLV1-50A0A075B6I6 118 aa11.15□□□□□ -0.62
AC004540.1-201ENST00000439120 GNB1LQ9BYB4 327 aa11.15□□□□□ -0.62
AC004540.1-201ENST00000439120 C22orf24Q9Y442 160 aa11.15□□□□□ -0.62
AC004540.1-201ENST00000439120 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
AC004540.1-201ENST00000439120 NUPR1O60356 82 aa11.13□□□□□ -0.63
AC004540.1-201ENST00000439120 PDZD11Q5EBL8 140 aa11.13□□□□□ -0.63
AC004540.1-201ENST00000439120 SEC11CQ9BY50 192 aa11.13□□□□□ -0.63
AC004540.1-201ENST00000439120 SMCO4Q9NRQ5 59 aa11.13□□□□□ -0.63
AC004540.1-201ENST00000439120 SMIM1B2RUZ4 78 aa11.12□□□□□ -0.63
AC004540.1-201ENST00000439120 COX19Q49B96 90 aa11.12□□□□□ -0.63
AC004540.1-201ENST00000439120 FA2HQ7L5A8 372 aa11.12□□□□□ -0.63
AC004540.1-201ENST00000439120 COX7B2Q8TF08 81 aa11.12□□□□□ -0.63
AC004540.1-201ENST00000439120 RPL13AP40429 203 aaKnown RBP11.11□□□□□ -0.63
AC004540.1-201ENST00000439120 ZNF861PO60384 105 aa11.1□□□□□ -0.63
AC004540.1-201ENST00000439120 KRTAP1-4P0C5Y4 121 aa11.1□□□□□ -0.63
AC004540.1-201ENST00000439120 MRPL55Q7Z7F7 128 aaKnown RBP11.1□□□□□ -0.63
AC004540.1-201ENST00000439120 CST9LQ9H4G1 147 aa11.1□□□□□ -0.63
AC004540.1-201ENST00000439120 TP73-AS1Q9UF72 201 aa11.1□□□□□ -0.63
AC004540.1-201ENST00000439120 LINC01546A6NGU7 62 aa11.09□□□□□ -0.63
AC004540.1-201ENST00000439120 FABP9Q0Z7S8 132 aa11.09□□□□□ -0.63
AC004540.1-201ENST00000439120 PMVKQ15126 192 aa11.09□□□□□ -0.63
AC004540.1-201ENST00000439120 MRPL18Q9H0U6 180 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-201ENST00000439120 IGLV5-45A0A087WSX0 123 aa11.08□□□□□ -0.64
AC004540.1-201ENST00000439120 H3BRM9 83 aa11.08□□□□□ -0.64
AC004540.1-201ENST00000439120 SPINK8P0C7L1 97 aa11.08□□□□□ -0.64
AC004540.1-201ENST00000439120 IFITM2Q01629 132 aa11.08□□□□□ -0.64
AC004540.1-201ENST00000439120 COMMD7Q86VX2 200 aa11.07□□□□□ -0.64
AC004540.1-201ENST00000439120 RAB5BP61020 215 aa11.06□□□□□ -0.64
AC004540.1-201ENST00000439120 RPS10P5Q9NQ39 176 aa11.06□□□□□ -0.64
AC004540.1-201ENST00000439120 ATP5LO75964 103 aa11.05□□□□□ -0.64
AC004540.1-201ENST00000439120 RPL28P46779 137 aaKnown RBP11.05□□□□□ -0.64
AC004540.1-201ENST00000439120 RHEBQ15382 184 aa11.05□□□□□ -0.64
AC004540.1-201ENST00000439120 CARHSP1Q9Y2V2 147 aaKnown RBP11.05□□□□□ -0.64
AC004540.1-201ENST00000439120 RNF213Q63HN8 5207 aa11.05□□□□□ -0.64
AC004540.1-201ENST00000439120 BCE1O60756 84 aa11.04□□□□□ -0.64
AC004540.1-201ENST00000439120 NDUFA6P56556 154 aa11.04□□□□□ -0.64
AC004540.1-201ENST00000439120 NKAPP1Q8N9T2 125 aa11.04□□□□□ -0.64
AC004540.1-201ENST00000439120 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
AC004540.1-201ENST00000439120 RPL37AP8A6NKH3 93 aa11.03□□□□□ -0.64
AC004540.1-201ENST00000439120 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
AC004540.1-201ENST00000439120 IGLC3P0DOY3 106 aa10.99□□□□□ -0.65
AC004540.1-201ENST00000439120 PFN2P35080 140 aa10.99□□□□□ -0.65
AC004540.1-201ENST00000439120 PRR4Q16378 134 aa10.99□□□□□ -0.65
AC004540.1-201ENST00000439120 C10orf91Q5T1B1 145 aa10.99□□□□□ -0.65
AC004540.1-201ENST00000439120 TRAPPC1Q9Y5R8 145 aa10.99□□□□□ -0.65
AC004540.1-201ENST00000439120 LINC00614P0C842 121 aa10.98□□□□□ -0.65
AC004540.1-201ENST00000439120 IGLV5-37A0A075B6J1 123 aa10.97□□□□□ -0.65
AC004540.1-201ENST00000439120 HBDP02042 147 aa10.97□□□□□ -0.65
AC004540.1-201ENST00000439120 UBE2AP49459 152 aa10.97□□□□□ -0.65
AC004540.1-201ENST00000439120 CRYGAP11844 174 aa10.96□□□□□ -0.65
AC004540.1-201ENST00000439120 C18orf32Q8TCD1 76 aa10.96□□□□□ -0.65
AC004540.1-201ENST00000439120 A0A096LNJ9 63 aa10.95□□□□□ -0.66
AC004540.1-201ENST00000439120 IGLV5-39A0A0G2JS06 123 aa10.95□□□□□ -0.66
AC004540.1-201ENST00000439120 ZNF22P17026 224 aaPredicted RBP10.95□□□□□ -0.66
AC004540.1-201ENST00000439120 PMCHL1Q16048 86 aa10.95□□□□□ -0.66
AC004540.1-201ENST00000439120 LPAP08519 4548 aa10.94□□□□□ -0.66
AC004540.1-201ENST00000439120 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
AC004540.1-201ENST00000439120 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
AC004540.1-201ENST00000439120 TYMSOSQ8TAI1 123 aa10.94□□□□□ -0.66
AC004540.1-201ENST00000439120 ERG28Q9UKR5 140 aa10.94□□□□□ -0.66
AC004540.1-201ENST00000439120 TSPAN13O95857 204 aa10.93□□□□□ -0.66
AC004540.1-201ENST00000439120 TMEM170BQ5T4T1 132 aa10.93□□□□□ -0.66
AC004540.1-201ENST00000439120 URB1-AS1Q96HZ7 61 aa10.93□□□□□ -0.66
AC004540.1-201ENST00000439120 A0A087X002 238 aa10.92□□□□□ -0.66
AC004540.1-201ENST00000439120 COX17Q14061 63 aa10.92□□□□□ -0.66
AC004540.1-201ENST00000439120 BAGE3Q86Y29 109 aa10.92□□□□□ -0.66
AC004540.1-201ENST00000439120 SND1-IT1Q9HBX3 110 aa10.92□□□□□ -0.66
AC004540.1-201ENST00000439120 SCO1O75880 301 aa10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 APOC3P02656 99 aa10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 RPL24P83731 157 aaKnown RBP10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 NDUFA5Q16718 116 aa10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 SFTA2Q6UW10 78 aa10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 ZNF625Q96I27 306 aaPredicted RBP10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 C11orf86A6NJI1 115 aa10.89□□□□□ -0.67
AC004540.1-201ENST00000439120 SNAPINO95295 136 aa10.89□□□□□ -0.67
AC004540.1-201ENST00000439120 VPREB1P12018 145 aa10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 FAM19A1Q7Z5A9 133 aa10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 KRTAP13-1Q8IUC0 172 aa10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 SVBPQ8N300 66 aa10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 ANAPC11Q9NYG5 84 aa10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 CHTOPQ9Y3Y2 248 aaKnown RBP10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 PRLHP81277 87 aa10.87□□□□□ -0.67
AC004540.1-201ENST00000439120 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
AC004540.1-201ENST00000439120 LINC00158P58513 81 aa10.85□□□□□ -0.67
AC004540.1-201ENST00000439120 FAM229BQ4G0N7 80 aa10.85□□□□□ -0.67
AC004540.1-201ENST00000439120 TMEM238C9JI98 176 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms