RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 S100PP25815 95 aa11.2□□□□□ -0.62
AC004540.1-201ENST00000439120 UQCC3Q6UW78 93 aa11.2□□□□□ -0.62
AC004540.1-201ENST00000439120 LINC00469Q8N7U9 141 aa11.2□□□□□ -0.62
AC004540.1-201ENST00000439120 PRR26Q8N8Z3 221 aa11.2□□□□□ -0.62
AC004540.1-201ENST00000439120 SCGB3A1Q96QR1 104 aa11.2□□□□□ -0.62
AC004540.1-201ENST00000439120 ERASQ7Z444 233 aa11.19□□□□□ -0.62
AC004540.1-201ENST00000439120 F8VRH5 84 aa11.18□□□□□ -0.62
AC004540.1-201ENST00000439120 ADCYAP1P18509 176 aa11.18□□□□□ -0.62
AC004540.1-201ENST00000439120 LRP2P98164 4655 aa11.17□□□□□ -0.62
AC004540.1-201ENST00000439120 TMEM218A2RU14 115 aa11.17□□□□□ -0.62
AC004540.1-201ENST00000439120 CXCL5P42830 114 aa11.17□□□□□ -0.62
AC004540.1-201ENST00000439120 XAGE1AQ9HD64 81 aa11.17□□□□□ -0.62
AC004540.1-201ENST00000439120 LINC01549A6NIU2 74 aa11.16□□□□□ -0.62
AC004540.1-201ENST00000439120 LBHQ53QV2 105 aaPredicted RBP11.16□□□□□ -0.62
AC004540.1-201ENST00000439120 IGLV1-50A0A075B6I6 118 aa11.15□□□□□ -0.62
AC004540.1-201ENST00000439120 GNB1LQ9BYB4 327 aa11.15□□□□□ -0.62
AC004540.1-201ENST00000439120 C22orf24Q9Y442 160 aa11.15□□□□□ -0.62
AC004540.1-201ENST00000439120 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
AC004540.1-201ENST00000439120 NUPR1O60356 82 aa11.13□□□□□ -0.63
AC004540.1-201ENST00000439120 PDZD11Q5EBL8 140 aa11.13□□□□□ -0.63
AC004540.1-201ENST00000439120 SEC11CQ9BY50 192 aa11.13□□□□□ -0.63
AC004540.1-201ENST00000439120 SMCO4Q9NRQ5 59 aa11.13□□□□□ -0.63
AC004540.1-201ENST00000439120 SMIM1B2RUZ4 78 aa11.12□□□□□ -0.63
AC004540.1-201ENST00000439120 COX19Q49B96 90 aa11.12□□□□□ -0.63
AC004540.1-201ENST00000439120 FA2HQ7L5A8 372 aa11.12□□□□□ -0.63
AC004540.1-201ENST00000439120 COX7B2Q8TF08 81 aa11.12□□□□□ -0.63
AC004540.1-201ENST00000439120 RPL13AP40429 203 aaKnown RBP11.11□□□□□ -0.63
AC004540.1-201ENST00000439120 ZNF861PO60384 105 aa11.1□□□□□ -0.63
AC004540.1-201ENST00000439120 KRTAP1-4P0C5Y4 121 aa11.1□□□□□ -0.63
AC004540.1-201ENST00000439120 MRPL55Q7Z7F7 128 aaKnown RBP11.1□□□□□ -0.63
AC004540.1-201ENST00000439120 CST9LQ9H4G1 147 aa11.1□□□□□ -0.63
AC004540.1-201ENST00000439120 TP73-AS1Q9UF72 201 aa11.1□□□□□ -0.63
AC004540.1-201ENST00000439120 LINC01546A6NGU7 62 aa11.09□□□□□ -0.63
AC004540.1-201ENST00000439120 FABP9Q0Z7S8 132 aa11.09□□□□□ -0.63
AC004540.1-201ENST00000439120 PMVKQ15126 192 aa11.09□□□□□ -0.63
AC004540.1-201ENST00000439120 MRPL18Q9H0U6 180 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-201ENST00000439120 IGLV5-45A0A087WSX0 123 aa11.08□□□□□ -0.64
AC004540.1-201ENST00000439120 H3BRM9 83 aa11.08□□□□□ -0.64
AC004540.1-201ENST00000439120 SPINK8P0C7L1 97 aa11.08□□□□□ -0.64
AC004540.1-201ENST00000439120 IFITM2Q01629 132 aa11.08□□□□□ -0.64
AC004540.1-201ENST00000439120 COMMD7Q86VX2 200 aa11.07□□□□□ -0.64
AC004540.1-201ENST00000439120 RAB5BP61020 215 aa11.06□□□□□ -0.64
AC004540.1-201ENST00000439120 RPS10P5Q9NQ39 176 aa11.06□□□□□ -0.64
AC004540.1-201ENST00000439120 ATP5LO75964 103 aa11.05□□□□□ -0.64
AC004540.1-201ENST00000439120 RPL28P46779 137 aaKnown RBP11.05□□□□□ -0.64
AC004540.1-201ENST00000439120 RHEBQ15382 184 aa11.05□□□□□ -0.64
AC004540.1-201ENST00000439120 CARHSP1Q9Y2V2 147 aaKnown RBP11.05□□□□□ -0.64
AC004540.1-201ENST00000439120 RNF213Q63HN8 5207 aa11.05□□□□□ -0.64
AC004540.1-201ENST00000439120 BCE1O60756 84 aa11.04□□□□□ -0.64
AC004540.1-201ENST00000439120 NDUFA6P56556 154 aa11.04□□□□□ -0.64
AC004540.1-201ENST00000439120 NKAPP1Q8N9T2 125 aa11.04□□□□□ -0.64
AC004540.1-201ENST00000439120 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
AC004540.1-201ENST00000439120 RPL37AP8A6NKH3 93 aa11.03□□□□□ -0.64
AC004540.1-201ENST00000439120 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
AC004540.1-201ENST00000439120 IGLC3P0DOY3 106 aa10.99□□□□□ -0.65
AC004540.1-201ENST00000439120 PFN2P35080 140 aa10.99□□□□□ -0.65
AC004540.1-201ENST00000439120 PRR4Q16378 134 aa10.99□□□□□ -0.65
AC004540.1-201ENST00000439120 C10orf91Q5T1B1 145 aa10.99□□□□□ -0.65
AC004540.1-201ENST00000439120 TRAPPC1Q9Y5R8 145 aa10.99□□□□□ -0.65
AC004540.1-201ENST00000439120 LINC00614P0C842 121 aa10.98□□□□□ -0.65
AC004540.1-201ENST00000439120 IGLV5-37A0A075B6J1 123 aa10.97□□□□□ -0.65
AC004540.1-201ENST00000439120 HBDP02042 147 aa10.97□□□□□ -0.65
AC004540.1-201ENST00000439120 UBE2AP49459 152 aa10.97□□□□□ -0.65
AC004540.1-201ENST00000439120 CRYGAP11844 174 aa10.96□□□□□ -0.65
AC004540.1-201ENST00000439120 C18orf32Q8TCD1 76 aa10.96□□□□□ -0.65
AC004540.1-201ENST00000439120 A0A096LNJ9 63 aa10.95□□□□□ -0.66
AC004540.1-201ENST00000439120 IGLV5-39A0A0G2JS06 123 aa10.95□□□□□ -0.66
AC004540.1-201ENST00000439120 ZNF22P17026 224 aaPredicted RBP10.95□□□□□ -0.66
AC004540.1-201ENST00000439120 PMCHL1Q16048 86 aa10.95□□□□□ -0.66
AC004540.1-201ENST00000439120 LPAP08519 4548 aa10.94□□□□□ -0.66
AC004540.1-201ENST00000439120 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
AC004540.1-201ENST00000439120 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
AC004540.1-201ENST00000439120 TYMSOSQ8TAI1 123 aa10.94□□□□□ -0.66
AC004540.1-201ENST00000439120 ERG28Q9UKR5 140 aa10.94□□□□□ -0.66
AC004540.1-201ENST00000439120 TSPAN13O95857 204 aa10.93□□□□□ -0.66
AC004540.1-201ENST00000439120 TMEM170BQ5T4T1 132 aa10.93□□□□□ -0.66
AC004540.1-201ENST00000439120 URB1-AS1Q96HZ7 61 aa10.93□□□□□ -0.66
AC004540.1-201ENST00000439120 A0A087X002 238 aa10.92□□□□□ -0.66
AC004540.1-201ENST00000439120 COX17Q14061 63 aa10.92□□□□□ -0.66
AC004540.1-201ENST00000439120 BAGE3Q86Y29 109 aa10.92□□□□□ -0.66
AC004540.1-201ENST00000439120 SND1-IT1Q9HBX3 110 aa10.92□□□□□ -0.66
AC004540.1-201ENST00000439120 SCO1O75880 301 aa10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 APOC3P02656 99 aa10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 RPL24P83731 157 aaKnown RBP10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 NDUFA5Q16718 116 aa10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 SFTA2Q6UW10 78 aa10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 ZNF625Q96I27 306 aaPredicted RBP10.91□□□□□ -0.66
AC004540.1-201ENST00000439120 C11orf86A6NJI1 115 aa10.89□□□□□ -0.67
AC004540.1-201ENST00000439120 SNAPINO95295 136 aa10.89□□□□□ -0.67
AC004540.1-201ENST00000439120 VPREB1P12018 145 aa10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 FAM19A1Q7Z5A9 133 aa10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 KRTAP13-1Q8IUC0 172 aa10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 SVBPQ8N300 66 aa10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 ANAPC11Q9NYG5 84 aa10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 CHTOPQ9Y3Y2 248 aaKnown RBP10.88□□□□□ -0.67
AC004540.1-201ENST00000439120 PRLHP81277 87 aa10.87□□□□□ -0.67
AC004540.1-201ENST00000439120 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
AC004540.1-201ENST00000439120 LINC00158P58513 81 aa10.85□□□□□ -0.67
AC004540.1-201ENST00000439120 FAM229BQ4G0N7 80 aa10.85□□□□□ -0.67
AC004540.1-201ENST00000439120 TMEM238C9JI98 176 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms