RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ANKRD36A6QL64 1941 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 ZNF727A8MUV8 499 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 NDUFA2O43678 99 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 TSPAN19P0C672 248 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 HIST1H1BP16401 226 aaKnown RBP0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 EVI2AP22794 236 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 SNRPD3P62318 126 aaKnown RBP0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 DCDP81605 110 aaKnown RBP0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 PLGLB1Q02325 96 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 WFDC9Q8NEX5 89 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 OR8J3Q8NGG0 315 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 TPT1P8Q9HAU6 139 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 FAIMQ9NVQ4 179 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 METTL1Q9UBP6 276 aaKnown RBP0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 PAIP2BQ9ULR5 123 aaKnown RBP0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 MUC12Q9UKN1 5478 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 TNCP24821 2201 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 PNMA8CA0A1B0GUJ8 204 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 A0A1W2PPM0 123 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 NUPR2A6NF83 97 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 SMIM24O75264 130 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 GYPBP06028 91 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 HIST1H1AQ02539 215 aaPredicted RBP0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 ASB16-AS1Q495Z4 193 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 IDO2Q6ZQW0 420 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 C10orf111Q8N326 155 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 MAGOHBQ96A72 148 aaKnown RBP0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 COPZ2Q9P299 210 aa0.81□□□□□ -2.28
TRAPPC13-204ENST00000438419 LPAP08519 4548 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 TRBV30A0A0K0K1B3 111 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 FAM92AA1XBS5 289 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 EFCAB10A6NFE3 127 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 MIF4GDA9UHW6 222 aaKnown RBP0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 CD3DP04234 171 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 CCDC58Q4VC31 144 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 GLYATL3Q5SZD4 288 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 TMEM91Q6ZNR0 172 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 Q6ZQY7 126 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 Q86TA4 180 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 DEFB104AQ8WTQ1 72 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 COMMD3Q9UBI1 195 aa0.8□□□□□ -2.28
TRAPPC13-204ENST00000438419 MDN1Q9NU22 5596 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 A0A0G2JMM0 328 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 CXorf51AA0A1B0GTR3 108 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 TMEM30CPA0ZSE6 113 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 A6NN06 94 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 K7EP13 123 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 IGKCP01834 107 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 COX4I1P13073 169 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 IL7P13232 177 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 HLA-DRB4P13762 266 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 AKR1D1P51857 326 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 GNG11P61952 73 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 HAMPP81172 84 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 WHAMMP3Q1A5X7 153 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 DEFB112Q30KQ8 113 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 DEFB110Q30KQ9 67 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 NCMAPQ5T1S8 102 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 NDUFA11Q86Y39 141 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 PFDN5Q99471 154 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 KRTAP2-1Q9BYU5 128 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 SLC35B3Q9H1N7 401 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 MRPL36Q9P0J6 103 aaKnown RBP0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 DNAJC15Q9Y5T4 150 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 HLA-DRB4X5D2U9 266 aa0.79□□□□□ -2.28
TRAPPC13-204ENST00000438419 LYNX1G3V0Z9 82 aa0.78□□□□□ -2.28
TRAPPC13-204ENST00000438419 NCR2O95944 276 aa0.78□□□□□ -2.28
TRAPPC13-204ENST00000438419 IGLC6P0CF74 106 aa0.78□□□□□ -2.28
TRAPPC13-204ENST00000438419 ADCYAP1P18509 176 aa0.78□□□□□ -2.28
TRAPPC13-204ENST00000438419 KDELR1P24390 212 aa0.78□□□□□ -2.28
TRAPPC13-204ENST00000438419 RHOHQ15669 191 aa0.78□□□□□ -2.28
TRAPPC13-204ENST00000438419 LYPD5Q6UWN5 251 aa0.78□□□□□ -2.28
TRAPPC13-204ENST00000438419 MMGT1Q8N4V1 131 aa0.78□□□□□ -2.28
TRAPPC13-204ENST00000438419 FAM107BQ9H098 131 aa0.78□□□□□ -2.28
TRAPPC13-204ENST00000438419 APOC4-APOC2K7ER74 178 aa0.77□□□□□ -2.29
TRAPPC13-204ENST00000438419 M0R2Z0 102 aa0.77□□□□□ -2.29
TRAPPC13-204ENST00000438419 TPST1O60507 370 aa0.77□□□□□ -2.29
TRAPPC13-204ENST00000438419 IGF2P01344 180 aa0.77□□□□□ -2.29
TRAPPC13-204ENST00000438419 APOC2P02655 101 aa0.77□□□□□ -2.29
TRAPPC13-204ENST00000438419 MT1HL1P0DM35 61 aa0.77□□□□□ -2.29
TRAPPC13-204ENST00000438419 LINC00694P0DN24 101 aa0.77□□□□□ -2.29
TRAPPC13-204ENST00000438419 IQCJQ1A5X6 159 aa0.77□□□□□ -2.29
TRAPPC13-204ENST00000438419 SMIM3Q9BZL3 60 aa0.77□□□□□ -2.29
TRAPPC13-204ENST00000438419 ERG28Q9UKR5 140 aa0.77□□□□□ -2.29
TRAPPC13-204ENST00000438419 UQCRHLA0A096LP55 91 aa0.76□□□□□ -2.29
TRAPPC13-204ENST00000438419 H3BQF6 201 aa0.76□□□□□ -2.29
TRAPPC13-204ENST00000438419 RPS25P62851 125 aaKnown RBP0.76□□□□□ -2.29
TRAPPC13-204ENST00000438419 CLLU1Q5K131 121 aa0.76□□□□□ -2.29
TRAPPC13-204ENST00000438419 UNQ5815/PRO19632Q6UWF5 114 aa0.76□□□□□ -2.29
TRAPPC13-204ENST00000438419 DEFB106AQ8N104 65 aa0.76□□□□□ -2.29
TRAPPC13-204ENST00000438419 DEFB108BQ8NET1 73 aa0.76□□□□□ -2.29
TRAPPC13-204ENST00000438419 TSC22D3Q99576 134 aa0.76□□□□□ -2.29
TRAPPC13-204ENST00000438419 MRPL35Q9NZE8 188 aaKnown RBP0.76□□□□□ -2.29
TRAPPC13-204ENST00000438419 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
TRAPPC13-204ENST00000438419 DSTQ03001 7570 aaKnown RBP0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 TRBV20-1A0A075B6N2 111 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 FAM236AA0A1B0GUQ0 79 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 FAM236BA0A1B0GV22 79 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms