RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 PYGO1Q9Y3Y4 419 aa5.37□□□□□ -1.55
HERPUD2-206ENST00000438224 LRP1Q07954 4544 aaKnown RBP5.37□□□□□ -1.55
HERPUD2-206ENST00000438224 RAB5AP20339 215 aa5.36□□□□□ -1.55
HERPUD2-206ENST00000438224 IFI27P40305 119 aaPredicted RBP5.36□□□□□ -1.55
HERPUD2-206ENST00000438224 LINC00242Q5T6M2 205 aa5.36□□□□□ -1.55
HERPUD2-206ENST00000438224 C2orf66Q6UXQ4 117 aa5.36□□□□□ -1.55
HERPUD2-206ENST00000438224 Q6ZVQ6 151 aa5.36□□□□□ -1.55
HERPUD2-206ENST00000438224 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
HERPUD2-206ENST00000438224 HERC1Q15751 4861 aa5.36□□□□□ -1.55
HERPUD2-206ENST00000438224 TRAV9-1A0A075B6T8 112 aa5.35□□□□□ -1.55
HERPUD2-206ENST00000438224 A0A0J9YXV3 536 aa5.35□□□□□ -1.55
HERPUD2-206ENST00000438224 KRTAP29-1A8MX34 341 aaPredicted RBP5.35□□□□□ -1.55
HERPUD2-206ENST00000438224 SPAG11BQ08648 103 aa5.35□□□□□ -1.55
HERPUD2-206ENST00000438224 STPG4Q8N801 248 aa5.35□□□□□ -1.55
HERPUD2-206ENST00000438224 TMEM141Q96I45 108 aa5.35□□□□□ -1.55
HERPUD2-206ENST00000438224 CYSLTR1Q9Y271 337 aa5.35□□□□□ -1.55
HERPUD2-206ENST00000438224 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 IGIPA6NJ69 53 aa5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 UBE2D1P51668 147 aa5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 KIAA0087Q14695 138 aa5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 ORAOV1Q8WV07 137 aa5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 DPH3Q96FX2 82 aa5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 C2orf48Q96LS8 159 aa5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 CAMK2N2Q96S95 79 aa5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 AMELXQ99217 191 aa5.34□□□□□ -1.55
HERPUD2-206ENST00000438224 C6orf226Q5I0X4 101 aa5.33□□□□□ -1.56
HERPUD2-206ENST00000438224 OR10D4PQ8NGN7 298 aa5.33□□□□□ -1.56
HERPUD2-206ENST00000438224 GNB1LQ9BYB4 327 aa5.33□□□□□ -1.56
HERPUD2-206ENST00000438224 NXT2Q9NPJ8 142 aaKnown RBP5.33□□□□□ -1.56
HERPUD2-206ENST00000438224 RPS10P5Q9NQ39 176 aa5.33□□□□□ -1.56
HERPUD2-206ENST00000438224 TGIF2-C20orf24A0A0A6YYL0 155 aa5.32□□□□□ -1.56
HERPUD2-206ENST00000438224 LOC107984640A0A0U1RRK4 108 aa5.32□□□□□ -1.56
HERPUD2-206ENST00000438224 A0A1W2PNN7 141 aa5.32□□□□□ -1.56
HERPUD2-206ENST00000438224 LINC01546A6NGU7 62 aa5.32□□□□□ -1.56
HERPUD2-206ENST00000438224 APOMO95445 188 aa5.32□□□□□ -1.56
HERPUD2-206ENST00000438224 RHEBQ15382 184 aa5.32□□□□□ -1.56
HERPUD2-206ENST00000438224 ORMDL2Q53FV1 153 aa5.32□□□□□ -1.56
HERPUD2-206ENST00000438224 UNQ6190/PRO20217Q6UXQ8 127 aa5.32□□□□□ -1.56
HERPUD2-206ENST00000438224 TEX43Q6ZNM6 134 aa5.32□□□□□ -1.56
HERPUD2-206ENST00000438224 C6orf48Q9UBA6 75 aa5.32□□□□□ -1.56
HERPUD2-206ENST00000438224 K7EMI3 77 aa5.31□□□□□ -1.56
HERPUD2-206ENST00000438224 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
HERPUD2-206ENST00000438224 S100PP25815 95 aa5.31□□□□□ -1.56
HERPUD2-206ENST00000438224 PRR3P79522 188 aaKnown RBP5.31□□□□□ -1.56
HERPUD2-206ENST00000438224 C2orf82Q6UX34 121 aa5.31□□□□□ -1.56
HERPUD2-206ENST00000438224 TOMM6Q96B49 74 aa5.31□□□□□ -1.56
HERPUD2-206ENST00000438224 MRPL35Q9NZE8 188 aaKnown RBP5.31□□□□□ -1.56
HERPUD2-206ENST00000438224 FAT3Q8TDW7 4589 aa5.31□□□□□ -1.56
HERPUD2-206ENST00000438224 A0A096LNJ9 63 aa5.3□□□□□ -1.56
HERPUD2-206ENST00000438224 APOC3P02656 99 aa5.3□□□□□ -1.56
HERPUD2-206ENST00000438224 RPL18AQ02543 176 aaKnown RBP5.3□□□□□ -1.56
HERPUD2-206ENST00000438224 FAM19A3Q7Z5A8 133 aa5.3□□□□□ -1.56
HERPUD2-206ENST00000438224 KRTAP7-1Q8IUC3 87 aa5.3□□□□□ -1.56
HERPUD2-206ENST00000438224 TIMM17AQ99595 171 aa5.3□□□□□ -1.56
HERPUD2-206ENST00000438224 GEMIN7Q9H840 131 aaKnown RBP5.3□□□□□ -1.56
HERPUD2-206ENST00000438224 FAM168BA1KXE4 195 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 NDUFA1O15239 70 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 OXTP01178 125 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 MT-ND6P03923 174 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 FABP9Q0Z7S8 132 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 C9orf116Q5BN46 136 aaPredicted RBP5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 Q6ZN92 141 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 Q6ZRP5 223 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 KRTAP11-1Q8IUC1 163 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 C7orf33Q8WU49 177 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 YPEL4Q96NS1 127 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 C2orf88Q9BSF0 95 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 LINC00474Q9P2X8 69 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 CDKN2A-AS1Q9UH64 79 aa5.29□□□□□ -1.56
HERPUD2-206ENST00000438224 COX19Q49B96 90 aa5.28□□□□□ -1.56
HERPUD2-206ENST00000438224 PHF5AQ7RTV0 110 aaKnown RBP5.28□□□□□ -1.56
HERPUD2-206ENST00000438224 LINC01561Q8N1V8 128 aa5.28□□□□□ -1.56
HERPUD2-206ENST00000438224 C18orf32Q8TCD1 76 aa5.28□□□□□ -1.56
HERPUD2-206ENST00000438224 SCGB3A1Q96QR1 104 aa5.28□□□□□ -1.56
HERPUD2-206ENST00000438224 PKIGQ9Y2B9 76 aa5.28□□□□□ -1.56
HERPUD2-206ENST00000438224 TLX1NBP0CAT3 122 aa5.27□□□□□ -1.57
HERPUD2-206ENST00000438224 SMIM1B2RUZ4 78 aa5.26□□□□□ -1.57
HERPUD2-206ENST00000438224 SNAPINO95295 136 aa5.26□□□□□ -1.57
HERPUD2-206ENST00000438224 C9orf129Q5T035 196 aaKnown RBP5.26□□□□□ -1.57
HERPUD2-206ENST00000438224 FA2HQ7L5A8 372 aa5.26□□□□□ -1.57
HERPUD2-206ENST00000438224 SVBPQ8N300 66 aa5.26□□□□□ -1.57
HERPUD2-206ENST00000438224 TOMM7Q9P0U1 55 aa5.26□□□□□ -1.57
HERPUD2-206ENST00000438224 TRAPPC1Q9Y5R8 145 aa5.26□□□□□ -1.57
HERPUD2-206ENST00000438224 TRBV30A0A0K0K1B3 111 aa5.25□□□□□ -1.57
HERPUD2-206ENST00000438224 G0S2P27469 103 aa5.25□□□□□ -1.57
HERPUD2-206ENST00000438224 HERVK_113P63121 156 aa5.25□□□□□ -1.57
HERPUD2-206ENST00000438224 PMCHL1Q16048 86 aa5.25□□□□□ -1.57
HERPUD2-206ENST00000438224 FAM19A5Q7Z5A7 132 aaPredicted RBP5.25□□□□□ -1.57
HERPUD2-206ENST00000438224 Q8IZM0 81 aa5.25□□□□□ -1.57
HERPUD2-206ENST00000438224 CST9LQ9H4G1 147 aa5.25□□□□□ -1.57
HERPUD2-206ENST00000438224 PSORS1C2Q9UIG4 136 aa5.25□□□□□ -1.57
HERPUD2-206ENST00000438224 TINCRA0A1B0GVN0 87 aa5.24□□□□□ -1.57
HERPUD2-206ENST00000438224 CBLN2Q8IUK8 224 aa5.24□□□□□ -1.57
HERPUD2-206ENST00000438224 LINC00469Q8N7U9 141 aa5.24□□□□□ -1.57
HERPUD2-206ENST00000438224 SMCO4Q9NRQ5 59 aa5.24□□□□□ -1.57
HERPUD2-206ENST00000438224 NDUFC2-KCTD14E9PQ53 114 aa5.23□□□□□ -1.57
HERPUD2-206ENST00000438224 SPINK8P0C7L1 97 aa5.23□□□□□ -1.57
HERPUD2-206ENST00000438224 RPL13AP40429 203 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms