RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 Q6YL49 198 aa8.4□□□□□ -1.07
PTCH1-209ENST00000437951 CYSRT1A8MQ03 144 aa8.4□□□□□ -1.07
PTCH1-209ENST00000437951 PSMG3-AS1Q96PY0 264 aa8.4□□□□□ -1.07
PTCH1-209ENST00000437951 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.07
PTCH1-209ENST00000437951 LINC00242Q5T6M2 205 aa8.4□□□□□ -1.07
PTCH1-209ENST00000437951 AMELXQ99217 191 aa8.4□□□□□ -1.07
PTCH1-209ENST00000437951 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
PTCH1-209ENST00000437951 Q6ZTC4 211 aa8.39□□□□□ -1.07
PTCH1-209ENST00000437951 LINC00846Q9NV44 126 aa8.39□□□□□ -1.07
PTCH1-209ENST00000437951 TLN1Q9Y490 2541 aaKnown RBP8.39□□□□□ -1.07
PTCH1-209ENST00000437951 INAFM1C9JVW0 142 aa8.38□□□□□ -1.07
PTCH1-209ENST00000437951 PCOTHQ58A44 107 aa8.38□□□□□ -1.07
PTCH1-209ENST00000437951 NUPR2A6NF83 97 aa8.38□□□□□ -1.07
PTCH1-209ENST00000437951 LINC00310P59036 64 aa8.38□□□□□ -1.07
PTCH1-209ENST00000437951 ADORA2A-AS1P86434 159 aa8.37□□□□□ -1.07
PTCH1-209ENST00000437951 COX8CQ7Z4L0 72 aa8.37□□□□□ -1.07
PTCH1-209ENST00000437951 COL4A4P53420 1690 aaPredicted RBP8.37□□□□□ -1.07
PTCH1-209ENST00000437951 PROK1P58294 105 aa8.37□□□□□ -1.07
PTCH1-209ENST00000437951 CD164Q04900 197 aa8.37□□□□□ -1.07
PTCH1-209ENST00000437951 LTBP2Q14767 1821 aa8.36□□□□□ -1.07
PTCH1-209ENST00000437951 FLG2Q5D862 2391 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-209ENST00000437951 M0R2N4 97 aa8.36□□□□□ -1.07
PTCH1-209ENST00000437951 IGLV2-18A0A075B6J9 118 aa8.36□□□□□ -1.07
PTCH1-209ENST00000437951 BBC3Q96PG8 261 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-209ENST00000437951 Q9BRP9 147 aa8.36□□□□□ -1.07
PTCH1-209ENST00000437951 KPRPQ5T749 579 aaPredicted RBP8.35□□□□□ -1.07
PTCH1-209ENST00000437951 PIEZO2Q9H5I5 2752 aa8.35□□□□□ -1.07
PTCH1-209ENST00000437951 SPINT4Q6UDR6 99 aa8.35□□□□□ -1.07
PTCH1-209ENST00000437951 C2orf48Q96LS8 159 aa8.34□□□□□ -1.07
PTCH1-209ENST00000437951 LINC01546A6NGU7 62 aa8.34□□□□□ -1.07
PTCH1-209ENST00000437951 ERC2-IT1O76042 136 aa8.33□□□□□ -1.08
PTCH1-209ENST00000437951 URB1-AS1Q96HZ7 61 aa8.33□□□□□ -1.08
PTCH1-209ENST00000437951 ADAMTSL4-AS1Q5T5F5 129 aa8.33□□□□□ -1.08
PTCH1-209ENST00000437951 Q6ZPA2 131 aa8.33□□□□□ -1.08
PTCH1-209ENST00000437951 USP9XQ93008 2570 aaPredicted RBP8.33□□□□□ -1.08
PTCH1-209ENST00000437951 C7orf65Q6ZTY9 151 aa8.33□□□□□ -1.08
PTCH1-209ENST00000437951 X6R8D5 127 aa8.32□□□□□ -1.08
PTCH1-209ENST00000437951 A0A1B0GUV1 79 aa8.32□□□□□ -1.08
PTCH1-209ENST00000437951 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
PTCH1-209ENST00000437951 PRR9Q5T870 116 aa8.32□□□□□ -1.08
PTCH1-209ENST00000437951 ANKRD17O75179 2603 aaKnown RBP8.32□□□□□ -1.08
PTCH1-209ENST00000437951 C11orf21Q9P2W6 132 aa8.31□□□□□ -1.08
PTCH1-209ENST00000437951 LINC00482Q8N8I6 264 aa8.31□□□□□ -1.08
PTCH1-209ENST00000437951 C6orf48Q9UBA6 75 aa8.31□□□□□ -1.08
PTCH1-209ENST00000437951 ABCA12Q86UK0 2595 aa8.31□□□□□ -1.08
PTCH1-209ENST00000437951 LMO4P61968 165 aa8.3□□□□□ -1.08
PTCH1-209ENST00000437951 ATP11AUNQ6ZP68 121 aa8.3□□□□□ -1.08
PTCH1-209ENST00000437951 CIRBP-AS1Q8TBR5 109 aa8.3□□□□□ -1.08
PTCH1-209ENST00000437951 COL4A3Q01955 1670 aa8.3□□□□□ -1.08
PTCH1-209ENST00000437951 A0A087WSZ3 146 aa8.3□□□□□ -1.08
PTCH1-209ENST00000437951 LOC110117498A0A087WWA1 95 aa8.3□□□□□ -1.08
PTCH1-209ENST00000437951 SMIM29Q86T20 159 aa8.3□□□□□ -1.08
PTCH1-209ENST00000437951 COX6A2Q02221 97 aa8.29□□□□□ -1.08
PTCH1-209ENST00000437951 CRIP3Q6Q6R5 217 aa8.29□□□□□ -1.08
PTCH1-209ENST00000437951 UNQ6190/PRO20217Q6UXQ8 127 aa8.29□□□□□ -1.08
PTCH1-209ENST00000437951 Q8N2B8 174 aa8.29□□□□□ -1.08
PTCH1-209ENST00000437951 SPINK1P00995 79 aa8.29□□□□□ -1.08
PTCH1-209ENST00000437951 SBSPONQ8IVN8 264 aa8.29□□□□□ -1.08
PTCH1-209ENST00000437951 JMJD1CQ15652 2540 aa8.28□□□□□ -1.08
PTCH1-209ENST00000437951 NHLRC4P0CG21 123 aaPredicted RBP8.28□□□□□ -1.08
PTCH1-209ENST00000437951 C1orf229Q6ZS94 237 aaPredicted RBP8.27□□□□□ -1.08
PTCH1-209ENST00000437951 GAS8-AS1O95177 125 aa8.27□□□□□ -1.09
PTCH1-209ENST00000437951 IGLV1-40P01703 118 aa8.27□□□□□ -1.09
PTCH1-209ENST00000437951 IGLV5-52A0A0A0MRZ9 124 aa8.26□□□□□ -1.09
PTCH1-209ENST00000437951 PLA2G2AP14555 144 aa8.26□□□□□ -1.09
PTCH1-209ENST00000437951 LY6G6DO95868 133 aa8.26□□□□□ -1.09
PTCH1-209ENST00000437951 C11orf72Q8NBR9 251 aa8.26□□□□□ -1.09
PTCH1-209ENST00000437951 NAV2Q8IVL1 2488 aa8.26□□□□□ -1.09
PTCH1-209ENST00000437951 PRLHP81277 87 aa8.25□□□□□ -1.09
PTCH1-209ENST00000437951 MSMPQ1L6U9 139 aa8.24□□□□□ -1.09
PTCH1-209ENST00000437951 Q6ZSV7 163 aa8.24□□□□□ -1.09
PTCH1-209ENST00000437951 LINC00337Q8N6G1 96 aa8.24□□□□□ -1.09
PTCH1-209ENST00000437951 SPATA3Q8NHX4 192 aa8.24□□□□□ -1.09
PTCH1-209ENST00000437951 BRI3O95415 125 aa8.23□□□□□ -1.09
PTCH1-209ENST00000437951 TRAV22A0A0B4J277 110 aa8.23□□□□□ -1.09
PTCH1-209ENST00000437951 KTN1-AS1Q86SY8 53 aa8.23□□□□□ -1.09
PTCH1-209ENST00000437951 COL27A1Q8IZC6 1860 aaPredicted RBP8.23□□□□□ -1.09
PTCH1-209ENST00000437951 A0A096LNJ9 63 aa8.22□□□□□ -1.09
PTCH1-209ENST00000437951 C9orf116Q5BN46 136 aaPredicted RBP8.22□□□□□ -1.09
PTCH1-209ENST00000437951 PRR3P79522 188 aaKnown RBP8.21□□□□□ -1.09
PTCH1-209ENST00000437951 PRO0461Q9UI25 63 aa8.21□□□□□ -1.09
PTCH1-209ENST00000437951 C6orf223Q8N319 242 aa8.21□□□□□ -1.09
PTCH1-209ENST00000437951 SRCAPQ6ZRS2 3230 aa8.21□□□□□ -1.1
PTCH1-209ENST00000437951 OXLD1Q5BKU9 147 aa8.21□□□□□ -1.1
PTCH1-209ENST00000437951 ZNF462Q96JM2 2506 aa8.2□□□□□ -1.1
PTCH1-209ENST00000437951 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
PTCH1-209ENST00000437951 SETD2Q9BYW2 2564 aaPredicted RBP8.2□□□□□ -1.1
PTCH1-209ENST00000437951 ELOF1P60002 83 aaKnown RBP8.19□□□□□ -1.1
PTCH1-209ENST00000437951 Q6ZQT0 140 aa8.19□□□□□ -1.1
PTCH1-209ENST00000437951 ZNF580Q9UK33 172 aa8.19□□□□□ -1.1
PTCH1-209ENST00000437951 LCA10Q71F78 164 aa8.19□□□□□ -1.1
PTCH1-209ENST00000437951 UQCR11O14957 56 aa8.19□□□□□ -1.1
PTCH1-209ENST00000437951 LOC101927531A0A1B0GV80 90 aa8.19□□□□□ -1.1
PTCH1-209ENST00000437951 IGKV2D-30A0A075B6S6 120 aa8.18□□□□□ -1.1
PTCH1-209ENST00000437951 IGKV2-30P06310 120 aa8.18□□□□□ -1.1
PTCH1-209ENST00000437951 Q9UF83 564 aa8.17□□□□□ -1.1
PTCH1-209ENST00000437951 SMCPP49901 116 aaPredicted RBP8.17□□□□□ -1.1
PTCH1-209ENST00000437951 FHL2Q14192 279 aa8.17□□□□□ -1.1
PTCH1-209ENST00000437951 C11orf71Q6IPW1 123 aa8.16□□□□□ -1.1
PTCH1-209ENST00000437951 IGLV4-60A0A075B6I1 120 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms