RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 SLPIP03973 132 aa6.47□□□□□ -1.37
AC004448.3-201ENST00000435953 C2orf82Q6UX34 121 aa6.47□□□□□ -1.37
AC004448.3-201ENST00000435953 UNQ6190/PRO20217Q6UXQ8 127 aa6.47□□□□□ -1.37
AC004448.3-201ENST00000435953 ZNF625Q96I27 306 aaPredicted RBP6.47□□□□□ -1.37
AC004448.3-201ENST00000435953 C14orf144Q96I85 54 aa6.47□□□□□ -1.37
AC004448.3-201ENST00000435953 TTTY13Q9BZ97 58 aa6.47□□□□□ -1.37
AC004448.3-201ENST00000435953 FAT2Q9NYQ8 4349 aa6.46□□□□□ -1.37
AC004448.3-201ENST00000435953 NDUFA1O15239 70 aa6.46□□□□□ -1.38
AC004448.3-201ENST00000435953 COX8AP10176 69 aa6.46□□□□□ -1.38
AC004448.3-201ENST00000435953 CXCL5P42830 114 aa6.46□□□□□ -1.38
AC004448.3-201ENST00000435953 TNP2Q05952 138 aa6.46□□□□□ -1.38
AC004448.3-201ENST00000435953 C10orf25Q5T742 122 aa6.46□□□□□ -1.38
AC004448.3-201ENST00000435953 CAMK2N2Q96S95 79 aa6.46□□□□□ -1.38
AC004448.3-201ENST00000435953 ZNF815PA8K554 130 aa6.45□□□□□ -1.38
AC004448.3-201ENST00000435953 DLEU1O43261 78 aa6.45□□□□□ -1.38
AC004448.3-201ENST00000435953 HERV-K104P63124 156 aa6.45□□□□□ -1.38
AC004448.3-201ENST00000435953 SYCNQ0VAF6 134 aa6.45□□□□□ -1.38
AC004448.3-201ENST00000435953 SFTA2Q6UW10 78 aa6.45□□□□□ -1.38
AC004448.3-201ENST00000435953 BOD1L2Q8IYS8 172 aa6.45□□□□□ -1.38
AC004448.3-201ENST00000435953 Q8N814 137 aa6.45□□□□□ -1.38
AC004448.3-201ENST00000435953 FRAS1Q86XX4 4008 aa6.45□□□□□ -1.38
AC004448.3-201ENST00000435953 EREGO14944 169 aa6.44□□□□□ -1.38
AC004448.3-201ENST00000435953 SLC25A34Q6PIV7 304 aa6.44□□□□□ -1.38
AC004448.3-201ENST00000435953 Q6ZRU5 148 aa6.44□□□□□ -1.38
AC004448.3-201ENST00000435953 RYR3Q15413 4870 aa6.43□□□□□ -1.38
AC004448.3-201ENST00000435953 A0A0J9YXY3 114 aa6.43□□□□□ -1.38
AC004448.3-201ENST00000435953 CNBPP62633 177 aaKnown RBP6.43□□□□□ -1.38
AC004448.3-201ENST00000435953 RNF151Q2KHN1 245 aa6.43□□□□□ -1.38
AC004448.3-201ENST00000435953 LINC00336Q6ZUF6 198 aa6.43□□□□□ -1.38
AC004448.3-201ENST00000435953 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
AC004448.3-201ENST00000435953 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.42□□□□□ -1.38
AC004448.3-201ENST00000435953 TRBV30A0A0K0K1B3 111 aa6.42□□□□□ -1.38
AC004448.3-201ENST00000435953 LINC00587B1AMM8 73 aa6.42□□□□□ -1.38
AC004448.3-201ENST00000435953 C9orf116Q5BN46 136 aaPredicted RBP6.42□□□□□ -1.38
AC004448.3-201ENST00000435953 CARD19Q96LW7 228 aa6.42□□□□□ -1.38
AC004448.3-201ENST00000435953 C6orf48Q9UBA6 75 aa6.42□□□□□ -1.38
AC004448.3-201ENST00000435953 PKD1P98161 4303 aa6.41□□□□□ -1.38
AC004448.3-201ENST00000435953 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.41□□□□□ -1.38
AC004448.3-201ENST00000435953 CIRBPQ14011 172 aaKnown RBP6.41□□□□□ -1.38
AC004448.3-201ENST00000435953 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
AC004448.3-201ENST00000435953 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
AC004448.3-201ENST00000435953 UQCR10Q9UDW1 63 aa6.41□□□□□ -1.38
AC004448.3-201ENST00000435953 TIMM17BO60830 172 aa6.4□□□□□ -1.38
AC004448.3-201ENST00000435953 SMIM13P0DJ93 91 aa6.4□□□□□ -1.38
AC004448.3-201ENST00000435953 PFN2P35080 140 aa6.4□□□□□ -1.38
AC004448.3-201ENST00000435953 LINC00158P58513 81 aa6.4□□□□□ -1.38
AC004448.3-201ENST00000435953 COX17Q14061 63 aa6.4□□□□□ -1.38
AC004448.3-201ENST00000435953 MEIG1Q5JSS6 88 aa6.4□□□□□ -1.38
AC004448.3-201ENST00000435953 C9orf163Q8N9P6 203 aa6.4□□□□□ -1.38
AC004448.3-201ENST00000435953 PGPEP1Q9NXJ5 209 aa6.4□□□□□ -1.38
AC004448.3-201ENST00000435953 ERG28Q9UKR5 140 aa6.4□□□□□ -1.38
AC004448.3-201ENST00000435953 A0A0U1RRA0 63 aa6.39□□□□□ -1.39
AC004448.3-201ENST00000435953 ADAMTSL4-AS1Q5T5F5 129 aa6.39□□□□□ -1.39
AC004448.3-201ENST00000435953 HIGD1BQ9P298 99 aa6.39□□□□□ -1.39
AC004448.3-201ENST00000435953 TP73-AS1Q9UF72 201 aa6.39□□□□□ -1.39
AC004448.3-201ENST00000435953 HECTD4Q9Y4D8 3996 aa6.39□□□□□ -1.39
AC004448.3-201ENST00000435953 TSTD3H0UI37 97 aa6.38□□□□□ -1.39
AC004448.3-201ENST00000435953 TLX1NBP0CAT3 122 aa6.38□□□□□ -1.39
AC004448.3-201ENST00000435953 KRTAP10-2P60368 255 aa6.38□□□□□ -1.39
AC004448.3-201ENST00000435953 C2orf91Q6ZV80 131 aa6.38□□□□□ -1.39
AC004448.3-201ENST00000435953 LITAFQ99732 161 aa6.38□□□□□ -1.39
AC004448.3-201ENST00000435953 IGLV5-52A0A0A0MRZ9 124 aa6.37□□□□□ -1.39
AC004448.3-201ENST00000435953 NDUFC2-KCTD14E9PQ53 114 aa6.37□□□□□ -1.39
AC004448.3-201ENST00000435953 FUSP35637 526 aaKnown RBP eCLIP6.37□□□□□ -1.39
AC004448.3-201ENST00000435953 SDIM1Q6ZPB5 146 aa6.37□□□□□ -1.39
AC004448.3-201ENST00000435953 LOC107984640A0A0U1RRK4 108 aa6.36□□□□□ -1.39
AC004448.3-201ENST00000435953 TMEM238C9JI98 176 aa6.36□□□□□ -1.39
AC004448.3-201ENST00000435953 SRSF9Q13242 221 aaKnown RBP eCLIP6.36□□□□□ -1.39
AC004448.3-201ENST00000435953 Q6ZRP5 223 aa6.36□□□□□ -1.39
AC004448.3-201ENST00000435953 Q6ZVH6 145 aa6.36□□□□□ -1.39
AC004448.3-201ENST00000435953 MIR7-3HGQ8N6C7 128 aa6.36□□□□□ -1.39
AC004448.3-201ENST00000435953 SPANXDQ9BXN6 97 aa6.36□□□□□ -1.39
AC004448.3-201ENST00000435953 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
AC004448.3-201ENST00000435953 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
AC004448.3-201ENST00000435953 HNRNPA3P51991 378 aaKnown RBP6.35□□□□□ -1.39
AC004448.3-201ENST00000435953 PTTG1IPP53801 180 aa6.35□□□□□ -1.39
AC004448.3-201ENST00000435953 LINC01620Q4KN68 170 aa6.35□□□□□ -1.39
AC004448.3-201ENST00000435953 GAGE2EQ4V326 116 aa6.35□□□□□ -1.39
AC004448.3-201ENST00000435953 DAND5Q8N907 189 aa6.35□□□□□ -1.39
AC004448.3-201ENST00000435953 SND1-IT1Q9HBX3 110 aa6.35□□□□□ -1.39
AC004448.3-201ENST00000435953 GAGE2DQ9UEU5 116 aa6.35□□□□□ -1.39
AC004448.3-201ENST00000435953 DNAH5Q8TE73 4624 aa6.35□□□□□ -1.39
AC004448.3-201ENST00000435953 A0A1B0GVY2 172 aa6.34□□□□□ -1.39
AC004448.3-201ENST00000435953 IFITM1P13164 125 aa6.34□□□□□ -1.39
AC004448.3-201ENST00000435953 RPL18AQ02543 176 aaKnown RBP6.34□□□□□ -1.39
AC004448.3-201ENST00000435953 GAGE2BQ13066 116 aa6.34□□□□□ -1.39
AC004448.3-201ENST00000435953 MUSTN1Q8IVN3 82 aa6.34□□□□□ -1.39
AC004448.3-201ENST00000435953 HIST1H4GQ99525 98 aa6.34□□□□□ -1.39
AC004448.3-201ENST00000435953 PKIGQ9Y2B9 76 aa6.34□□□□□ -1.39
AC004448.3-201ENST00000435953 DNAH8Q96JB1 4490 aa6.33□□□□□ -1.4
AC004448.3-201ENST00000435953 LOC107984156A0A0G2JMH3 177 aa6.33□□□□□ -1.4
AC004448.3-201ENST00000435953 C16orf90A8MZG2 172 aa6.33□□□□□ -1.4
AC004448.3-201ENST00000435953 GCSHP23434 173 aa6.33□□□□□ -1.4
AC004448.3-201ENST00000435953 TAL2Q16559 108 aa6.33□□□□□ -1.4
AC004448.3-201ENST00000435953 ARL17AQ8IVW1 177 aa6.33□□□□□ -1.4
AC004448.3-201ENST00000435953 LINC00308Q8TCZ7 52 aa6.33□□□□□ -1.4
AC004448.3-201ENST00000435953 XAGE1AQ9HD64 81 aa6.33□□□□□ -1.4
AC004448.3-201ENST00000435953 DYNC1H1Q14204 4646 aaKnown RBP6.33□□□□□ -1.4
AC004448.3-201ENST00000435953 A0A096LNI7 61 aa6.32□□□□□ -1.4
AC004448.3-201ENST00000435953 EIF4EBP3O60516 100 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms