RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 SEC11CQ9BY50 192 aa6.22□□□□□ -1.41
CPNE1-214ENST00000435747 VCX2Q9H322 139 aa6.22□□□□□ -1.41
CPNE1-214ENST00000435747 MT-ND6P03923 174 aa6.21□□□□□ -1.42
CPNE1-214ENST00000435747 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
CPNE1-214ENST00000435747 GAGE2EQ4V326 116 aa6.21□□□□□ -1.42
CPNE1-214ENST00000435747 C1orf137Q5JT78 98 aa6.21□□□□□ -1.42
CPNE1-214ENST00000435747 Q6ZN92 141 aa6.21□□□□□ -1.42
CPNE1-214ENST00000435747 Q8IZM0 81 aa6.21□□□□□ -1.42
CPNE1-214ENST00000435747 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
CPNE1-214ENST00000435747 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.42
CPNE1-214ENST00000435747 CDKN2A-AS1Q9UH64 79 aa6.21□□□□□ -1.42
CPNE1-214ENST00000435747 IGLV5-45A0A087WSX0 123 aa6.2□□□□□ -1.42
CPNE1-214ENST00000435747 FAM19A5Q7Z5A7 132 aaPredicted RBP6.2□□□□□ -1.42
CPNE1-214ENST00000435747 DIRC1Q969H9 104 aa6.2□□□□□ -1.42
CPNE1-214ENST00000435747 ALKBH7Q9BT30 221 aaPredicted RBP6.2□□□□□ -1.42
CPNE1-214ENST00000435747 GNB1LQ9BYB4 327 aa6.2□□□□□ -1.42
CPNE1-214ENST00000435747 KRTAP1-4P0C5Y4 121 aa6.19□□□□□ -1.42
CPNE1-214ENST00000435747 HERVK_113P63121 156 aa6.19□□□□□ -1.42
CPNE1-214ENST00000435747 ERASQ7Z444 233 aa6.19□□□□□ -1.42
CPNE1-214ENST00000435747 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
CPNE1-214ENST00000435747 SMIM1B2RUZ4 78 aa6.18□□□□□ -1.42
CPNE1-214ENST00000435747 H0Y9J4 135 aa6.18□□□□□ -1.42
CPNE1-214ENST00000435747 M0QXV9 152 aa6.18□□□□□ -1.42
CPNE1-214ENST00000435747 TSPAN13O95857 204 aa6.18□□□□□ -1.42
CPNE1-214ENST00000435747 CARHSP1Q9Y2V2 147 aaKnown RBP6.18□□□□□ -1.42
CPNE1-214ENST00000435747 A0A096LNJ9 63 aa6.17□□□□□ -1.42
CPNE1-214ENST00000435747 G0S2P27469 103 aa6.17□□□□□ -1.42
CPNE1-214ENST00000435747 RPL13AP40429 203 aaKnown RBP6.17□□□□□ -1.42
CPNE1-214ENST00000435747 SEC11AP67812 179 aa6.17□□□□□ -1.42
CPNE1-214ENST00000435747 PAPPA-AS1Q5QFB9 102 aa6.17□□□□□ -1.42
CPNE1-214ENST00000435747 PACRGQ96M98 296 aaPredicted RBP6.17□□□□□ -1.42
CPNE1-214ENST00000435747 TINCRA0A1B0GVN0 87 aa6.16□□□□□ -1.42
CPNE1-214ENST00000435747 F8VRH5 84 aa6.16□□□□□ -1.42
CPNE1-214ENST00000435747 C6orf226Q5I0X4 101 aa6.16□□□□□ -1.42
CPNE1-214ENST00000435747 COMMD7Q86VX2 200 aa6.16□□□□□ -1.42
CPNE1-214ENST00000435747 URB1-AS1Q96HZ7 61 aa6.16□□□□□ -1.42
CPNE1-214ENST00000435747 SCGB3A1Q96QR1 104 aa6.16□□□□□ -1.42
CPNE1-214ENST00000435747 CST9LQ9H4G1 147 aa6.16□□□□□ -1.42
CPNE1-214ENST00000435747 TOMM7Q9P0U1 55 aa6.16□□□□□ -1.42
CPNE1-214ENST00000435747 LINC01549A6NIU2 74 aa6.15□□□□□ -1.42
CPNE1-214ENST00000435747 PRSS2P07478 247 aa6.15□□□□□ -1.42
CPNE1-214ENST00000435747 CKS1BP61024 79 aa6.15□□□□□ -1.42
CPNE1-214ENST00000435747 COX19Q49B96 90 aa6.15□□□□□ -1.42
CPNE1-214ENST00000435747 XAGE1AQ9HD64 81 aa6.15□□□□□ -1.42
CPNE1-214ENST00000435747 CRYGAP11844 174 aa6.14□□□□□ -1.43
CPNE1-214ENST00000435747 S100PP25815 95 aa6.14□□□□□ -1.43
CPNE1-214ENST00000435747 CXCL5P42830 114 aa6.14□□□□□ -1.43
CPNE1-214ENST00000435747 RHEBQ15382 184 aa6.14□□□□□ -1.43
CPNE1-214ENST00000435747 PDZD11Q5EBL8 140 aa6.14□□□□□ -1.43
CPNE1-214ENST00000435747 LINC00469Q8N7U9 141 aa6.14□□□□□ -1.43
CPNE1-214ENST00000435747 MRPL18Q9H0U6 180 aaKnown RBP6.14□□□□□ -1.43
CPNE1-214ENST00000435747 GEMIN7Q9H840 131 aaKnown RBP6.14□□□□□ -1.43
CPNE1-214ENST00000435747 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
CPNE1-214ENST00000435747 PMVKQ15126 192 aa6.13□□□□□ -1.43
CPNE1-214ENST00000435747 TP73-AS1Q9UF72 201 aa6.13□□□□□ -1.43
CPNE1-214ENST00000435747 IGLV5-39A0A0G2JS06 123 aa6.12□□□□□ -1.43
CPNE1-214ENST00000435747 UBE2BP63146 152 aa6.12□□□□□ -1.43
CPNE1-214ENST00000435747 C18orf32Q8TCD1 76 aa6.12□□□□□ -1.43
CPNE1-214ENST00000435747 COX7B2Q8TF08 81 aa6.12□□□□□ -1.43
CPNE1-214ENST00000435747 ZNF861PO60384 105 aa6.11□□□□□ -1.43
CPNE1-214ENST00000435747 IGLC3P0DOY3 106 aa6.11□□□□□ -1.43
CPNE1-214ENST00000435747 FABP9Q0Z7S8 132 aa6.11□□□□□ -1.43
CPNE1-214ENST00000435747 RPS10P5Q9NQ39 176 aa6.11□□□□□ -1.43
CPNE1-214ENST00000435747 IGLV5-37A0A075B6J1 123 aa6.1□□□□□ -1.43
CPNE1-214ENST00000435747 NUPR1O60356 82 aa6.1□□□□□ -1.43
CPNE1-214ENST00000435747 SPINK8P0C7L1 97 aa6.1□□□□□ -1.43
CPNE1-214ENST00000435747 TPRXLQ17RH7 258 aa6.1□□□□□ -1.43
CPNE1-214ENST00000435747 FA2HQ7L5A8 372 aa6.1□□□□□ -1.43
CPNE1-214ENST00000435747 MRPL55Q7Z7F7 128 aaKnown RBP6.1□□□□□ -1.43
CPNE1-214ENST00000435747 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
CPNE1-214ENST00000435747 ZNF22P17026 224 aaPredicted RBP6.09□□□□□ -1.43
CPNE1-214ENST00000435747 KRTAP13-1Q8IUC0 172 aa6.09□□□□□ -1.43
CPNE1-214ENST00000435747 LINC00614P0C842 121 aa6.08□□□□□ -1.44
CPNE1-214ENST00000435747 LBHQ53QV2 105 aaPredicted RBP6.08□□□□□ -1.44
CPNE1-214ENST00000435747 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
CPNE1-214ENST00000435747 SMCO4Q9NRQ5 59 aa6.08□□□□□ -1.44
CPNE1-214ENST00000435747 BCE1O60756 84 aa6.07□□□□□ -1.44
CPNE1-214ENST00000435747 HBDP02042 147 aa6.07□□□□□ -1.44
CPNE1-214ENST00000435747 CFC1BP0CG36 223 aa6.07□□□□□ -1.44
CPNE1-214ENST00000435747 PMCHL1Q16048 86 aa6.07□□□□□ -1.44
CPNE1-214ENST00000435747 RETNLBQ9BQ08 111 aa6.07□□□□□ -1.44
CPNE1-214ENST00000435747 TRAPPC1Q9Y5R8 145 aa6.07□□□□□ -1.44
CPNE1-214ENST00000435747 A0A087X002 238 aa6.06□□□□□ -1.44
CPNE1-214ENST00000435747 Q8NDZ9 215 aa6.06□□□□□ -1.44
CPNE1-214ENST00000435747 C11orf86A6NJI1 115 aa6.05□□□□□ -1.44
CPNE1-214ENST00000435747 RPL37AP8A6NKH3 93 aa6.05□□□□□ -1.44
CPNE1-214ENST00000435747 H3BRM9 83 aa6.05□□□□□ -1.44
CPNE1-214ENST00000435747 APOC3P02656 99 aa6.05□□□□□ -1.44
CPNE1-214ENST00000435747 RAB5BP61020 215 aa6.05□□□□□ -1.44
CPNE1-214ENST00000435747 ZNF625Q96I27 306 aaPredicted RBP6.05□□□□□ -1.44
CPNE1-214ENST00000435747 SYNE2Q8WXH0 6885 aaKnown RBP6.05□□□□□ -1.44
CPNE1-214ENST00000435747 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
CPNE1-214ENST00000435747 IGLV7-46A0A075B6I9 117 aa6.04□□□□□ -1.44
CPNE1-214ENST00000435747 SCO1O75880 301 aa6.04□□□□□ -1.44
CPNE1-214ENST00000435747 ATP5LO75964 103 aa6.04□□□□□ -1.44
CPNE1-214ENST00000435747 VPREB1P12018 145 aa6.04□□□□□ -1.44
CPNE1-214ENST00000435747 SVBPQ8N300 66 aa6.04□□□□□ -1.44
CPNE1-214ENST00000435747 SNAPINO95295 136 aa6.03□□□□□ -1.44
CPNE1-214ENST00000435747 RPL28P46779 137 aaKnown RBP6.03□□□□□ -1.44
CPNE1-214ENST00000435747 SND1-IT1Q9HBX3 110 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms