RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 ATXN8Q156A1 80 aa10.06□□□□□ -0.8
RFTN1-203ENST00000432519 DNAH3Q8TD57 4116 aa10.05□□□□□ -0.8
RFTN1-203ENST00000432519 GAGE12HA6NDE8 117 aa10.05□□□□□ -0.8
RFTN1-203ENST00000432519 CYSRT1A8MQ03 144 aa10.05□□□□□ -0.8
RFTN1-203ENST00000432519 LINC00158P58513 81 aa10.05□□□□□ -0.8
RFTN1-203ENST00000432519 ANGP03950 147 aaKnown RBP10.04□□□□□ -0.8
RFTN1-203ENST00000432519 IGKV2-28A0A075B6P5 120 aa10.04□□□□□ -0.8
RFTN1-203ENST00000432519 IGKV2D-28P01615 120 aa10.04□□□□□ -0.8
RFTN1-203ENST00000432519 SHISA2Q6UWI4 295 aa10.04□□□□□ -0.8
RFTN1-203ENST00000432519 SS18Q15532 418 aa10.03□□□□□ -0.8
RFTN1-203ENST00000432519 LINC00337Q8N6G1 96 aa10.03□□□□□ -0.8
RFTN1-203ENST00000432519 J3QR89 54 aa10.02□□□□□ -0.8
RFTN1-203ENST00000432519 CCL18P55774 89 aa10.02□□□□□ -0.8
RFTN1-203ENST00000432519 C6orf226Q5I0X4 101 aa10.02□□□□□ -0.8
RFTN1-203ENST00000432519 LST1O00453 97 aa10.02□□□□□ -0.81
RFTN1-203ENST00000432519 REG3AQ06141 175 aa10.02□□□□□ -0.81
RFTN1-203ENST00000432519 NTN5Q8WTR8 489 aaPredicted RBP10.02□□□□□ -0.81
RFTN1-203ENST00000432519 PPDPFLQ8WWR9 84 aa10.02□□□□□ -0.81
RFTN1-203ENST00000432519 BAHCC1Q9P281 2608 aa10.02□□□□□ -0.81
RFTN1-203ENST00000432519 CHCHD10Q8WYQ3 142 aaPredicted RBP10.01□□□□□ -0.81
RFTN1-203ENST00000432519 TEX49A0A1B0GTD5 131 aa10.01□□□□□ -0.81
RFTN1-203ENST00000432519 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
RFTN1-203ENST00000432519 SND1-IT1Q9HBX3 110 aa10.01□□□□□ -0.81
RFTN1-203ENST00000432519 COX6CP09669 75 aa10□□□□□ -0.81
RFTN1-203ENST00000432519 CDIP1Q9H305 208 aa10□□□□□ -0.81
RFTN1-203ENST00000432519 TRBV10-2A0A0K0K1G8 114 aa10□□□□□ -0.81
RFTN1-203ENST00000432519 KIAA0087Q14695 138 aa10□□□□□ -0.81
RFTN1-203ENST00000432519 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
RFTN1-203ENST00000432519 FAM218AQ96MZ4 157 aa9.99□□□□□ -0.81
RFTN1-203ENST00000432519 IBA57-AS1B1ANH7 110 aa9.99□□□□□ -0.81
RFTN1-203ENST00000432519 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
RFTN1-203ENST00000432519 C9orf116Q5BN46 136 aaPredicted RBP9.98□□□□□ -0.81
RFTN1-203ENST00000432519 CD164L2Q6UWJ8 174 aa9.98□□□□□ -0.81
RFTN1-203ENST00000432519 C3orf56Q8N813 242 aa9.98□□□□□ -0.81
RFTN1-203ENST00000432519 Q6ZTC4 211 aa9.97□□□□□ -0.81
RFTN1-203ENST00000432519 Q8IZM0 81 aa9.97□□□□□ -0.81
RFTN1-203ENST00000432519 COX7A2LO14548 114 aa9.97□□□□□ -0.81
RFTN1-203ENST00000432519 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
RFTN1-203ENST00000432519 LELP1Q5T871 98 aa9.96□□□□□ -0.81
RFTN1-203ENST00000432519 COPS9Q8WXC6 57 aa9.96□□□□□ -0.81
RFTN1-203ENST00000432519 M0QXV9 152 aa9.96□□□□□ -0.82
RFTN1-203ENST00000432519 PRR3P79522 188 aaKnown RBP9.96□□□□□ -0.82
RFTN1-203ENST00000432519 EGFEM1PQ0D2K5 195 aa9.96□□□□□ -0.82
RFTN1-203ENST00000432519 LYPD5Q6UWN5 251 aa9.96□□□□□ -0.82
RFTN1-203ENST00000432519 C6orf223Q8N319 242 aa9.96□□□□□ -0.82
RFTN1-203ENST00000432519 SIGMAR1Q99720 223 aa9.96□□□□□ -0.82
RFTN1-203ENST00000432519 TRAV8-4A0A0B4J246 113 aa9.95□□□□□ -0.82
RFTN1-203ENST00000432519 PRB2P02812 416 aaPredicted RBP9.95□□□□□ -0.82
RFTN1-203ENST00000432519 CRPP02741 224 aa9.94□□□□□ -0.82
RFTN1-203ENST00000432519 ENHOQ6UWT2 76 aa9.94□□□□□ -0.82
RFTN1-203ENST00000432519 C10orf25Q5T742 122 aa9.94□□□□□ -0.82
RFTN1-203ENST00000432519 LINC01600Q96MT4 127 aa9.94□□□□□ -0.82
RFTN1-203ENST00000432519 MGAM2Q2M2H8 2515 aa9.94□□□□□ -0.82
RFTN1-203ENST00000432519 CKS1BP61024 79 aa9.93□□□□□ -0.82
RFTN1-203ENST00000432519 WFDC10BQ8IUB3 73 aa9.93□□□□□ -0.82
RFTN1-203ENST00000432519 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
RFTN1-203ENST00000432519 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
RFTN1-203ENST00000432519 MALP21145 153 aa9.93□□□□□ -0.82
RFTN1-203ENST00000432519 XGP55808 180 aa9.93□□□□□ -0.82
RFTN1-203ENST00000432519 KPRPQ5T749 579 aaPredicted RBP9.92□□□□□ -0.82
RFTN1-203ENST00000432519 Q8NDZ9 215 aa9.92□□□□□ -0.82
RFTN1-203ENST00000432519 TRAV13-2A0A0B4J235 113 aa9.92□□□□□ -0.82
RFTN1-203ENST00000432519 MT-ATP8P03928 68 aa9.92□□□□□ -0.82
RFTN1-203ENST00000432519 A0A0J9YWU9 116 aa9.91□□□□□ -0.82
RFTN1-203ENST00000432519 PRR34Q9NV39 138 aa9.91□□□□□ -0.82
RFTN1-203ENST00000432519 RPL28P46779 137 aaKnown RBP9.91□□□□□ -0.82
RFTN1-203ENST00000432519 NANOS2P60321 138 aaKnown RBP9.91□□□□□ -0.82
RFTN1-203ENST00000432519 UBE2WQ96B02 151 aa9.91□□□□□ -0.82
RFTN1-203ENST00000432519 Q9HAA7 133 aa9.91□□□□□ -0.82
RFTN1-203ENST00000432519 H3BT86 120 aa9.9□□□□□ -0.82
RFTN1-203ENST00000432519 UNQ6190/PRO20217Q6UXQ8 127 aa9.9□□□□□ -0.82
RFTN1-203ENST00000432519 C22orf24Q9Y442 160 aa9.9□□□□□ -0.82
RFTN1-203ENST00000432519 HUWE1Q7Z6Z7 4374 aaKnown RBP9.9□□□□□ -0.82
RFTN1-203ENST00000432519 LINC01561Q8N1V8 128 aa9.9□□□□□ -0.82
RFTN1-203ENST00000432519 A0A087WYN8 130 aa9.89□□□□□ -0.83
RFTN1-203ENST00000432519 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
RFTN1-203ENST00000432519 OR13C6PQ8NH95 151 aa9.89□□□□□ -0.83
RFTN1-203ENST00000432519 SPAG11BQ08648 103 aa9.87□□□□□ -0.83
RFTN1-203ENST00000432519 ESRGQ1W209 222 aa9.87□□□□□ -0.83
RFTN1-203ENST00000432519 LYSTQ99698 3801 aa9.86□□□□□ -0.83
RFTN1-203ENST00000432519 TRACP01848 142 aa9.85□□□□□ -0.83
RFTN1-203ENST00000432519 KLK5Q9Y337 293 aaPredicted RBP9.85□□□□□ -0.83
RFTN1-203ENST00000432519 A0A1B0GV72 72 aa9.84□□□□□ -0.83
RFTN1-203ENST00000432519 BAALC-AS2P0C853 105 aa9.84□□□□□ -0.83
RFTN1-203ENST00000432519 COL7A1Q02388 2944 aa9.84□□□□□ -0.83
RFTN1-203ENST00000432519 C9orf129Q5T035 196 aaKnown RBP9.84□□□□□ -0.83
RFTN1-203ENST00000432519 CXCL5P42830 114 aa9.83□□□□□ -0.84
RFTN1-203ENST00000432519 DEFB131BA0A096LNP1 70 aa9.82□□□□□ -0.84
RFTN1-203ENST00000432519 KRTAP26-1Q6PEX3 210 aa9.82□□□□□ -0.84
RFTN1-203ENST00000432519 NCR3O14931 201 aa9.82□□□□□ -0.84
RFTN1-203ENST00000432519 C11orf45Q8TAV5 145 aa9.82□□□□□ -0.84
RFTN1-203ENST00000432519 H3BNG1 76 aa9.81□□□□□ -0.84
RFTN1-203ENST00000432519 SLPIP03973 132 aa9.81□□□□□ -0.84
RFTN1-203ENST00000432519 COX17Q14061 63 aa9.81□□□□□ -0.84
RFTN1-203ENST00000432519 HIGD2BQ4VC39 106 aa9.81□□□□□ -0.84
RFTN1-203ENST00000432519 LECT2O14960 151 aa9.81□□□□□ -0.84
RFTN1-203ENST00000432519 STAB2Q8WWQ8 2551 aa9.81□□□□□ -0.84
RFTN1-203ENST00000432519 DEFB121Q5J5C9 76 aa9.8□□□□□ -0.84
RFTN1-203ENST00000432519 MRAPQ8TCY5 172 aa9.8□□□□□ -0.84
RFTN1-203ENST00000432519 C6orf48Q9UBA6 75 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms