RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 HERVK_113P63121 156 aa11□□□□□ -0.65
AC004540.1-202ENST00000430548 C6orf226Q5I0X4 101 aa11□□□□□ -0.65
AC004540.1-202ENST00000430548 ALKBH7Q9BT30 221 aaPredicted RBP11□□□□□ -0.65
AC004540.1-202ENST00000430548 CTDSP1Q9GZU7 261 aa11□□□□□ -0.65
AC004540.1-202ENST00000430548 SEC11AP67812 179 aa10.99□□□□□ -0.65
AC004540.1-202ENST00000430548 MRPL55Q7Z7F7 128 aaKnown RBP10.99□□□□□ -0.65
AC004540.1-202ENST00000430548 CDKN2A-AS1Q9UH64 79 aa10.99□□□□□ -0.65
AC004540.1-202ENST00000430548 CXCL5P42830 114 aa10.98□□□□□ -0.65
AC004540.1-202ENST00000430548 TIMM17AQ99595 171 aa10.98□□□□□ -0.65
AC004540.1-202ENST00000430548 A0A1B0GVG6 124 aa10.97□□□□□ -0.65
AC004540.1-202ENST00000430548 BCE1O60756 84 aa10.97□□□□□ -0.65
AC004540.1-202ENST00000430548 RPL28P46779 137 aaKnown RBP10.97□□□□□ -0.65
AC004540.1-202ENST00000430548 PNRC1Q12796 327 aaPredicted RBP10.97□□□□□ -0.65
AC004540.1-202ENST00000430548 NXT2Q9NPJ8 142 aaKnown RBP10.97□□□□□ -0.65
AC004540.1-202ENST00000430548 PAPPA-AS1Q5QFB9 102 aa10.96□□□□□ -0.65
AC004540.1-202ENST00000430548 ANAPC16Q96DE5 110 aa10.96□□□□□ -0.65
AC004540.1-202ENST00000430548 A0A0U1RQV1 116 aa10.95□□□□□ -0.66
AC004540.1-202ENST00000430548 SMIM1B2RUZ4 78 aa10.94□□□□□ -0.66
AC004540.1-202ENST00000430548 TOMM6Q96B49 74 aa10.94□□□□□ -0.66
AC004540.1-202ENST00000430548 IGLV5-45A0A087WSX0 123 aa10.93□□□□□ -0.66
AC004540.1-202ENST00000430548 TSPAN13O95857 204 aa10.93□□□□□ -0.66
AC004540.1-202ENST00000430548 CRYGAP11844 174 aa10.93□□□□□ -0.66
AC004540.1-202ENST00000430548 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
AC004540.1-202ENST00000430548 GEMIN7Q9H840 131 aaKnown RBP10.93□□□□□ -0.66
AC004540.1-202ENST00000430548 IGLV5-37A0A075B6J1 123 aa10.92□□□□□ -0.66
AC004540.1-202ENST00000430548 MT-ND4LP03901 98 aa10.92□□□□□ -0.66
AC004540.1-202ENST00000430548 LINC00167Q96N53 147 aa10.92□□□□□ -0.66
AC004540.1-202ENST00000430548 G0S2P27469 103 aa10.91□□□□□ -0.66
AC004540.1-202ENST00000430548 TYMSOSQ8TAI1 123 aa10.91□□□□□ -0.66
AC004540.1-202ENST00000430548 PDZD11Q5EBL8 140 aa10.9□□□□□ -0.66
AC004540.1-202ENST00000430548 FAT4Q6V0I7 4981 aa10.89□□□□□ -0.67
AC004540.1-202ENST00000430548 TINCRA0A1B0GVN0 87 aa10.89□□□□□ -0.67
AC004540.1-202ENST00000430548 KRTAP13-2Q52LG2 175 aa10.89□□□□□ -0.67
AC004540.1-202ENST00000430548 LCE2AQ5TA79 106 aaPredicted RBP10.89□□□□□ -0.67
AC004540.1-202ENST00000430548 ERASQ7Z444 233 aa10.89□□□□□ -0.67
AC004540.1-202ENST00000430548 COX7B2Q8TF08 81 aa10.89□□□□□ -0.67
AC004540.1-202ENST00000430548 RPL37AP8A6NKH3 93 aa10.88□□□□□ -0.67
AC004540.1-202ENST00000430548 MUC17Q685J3 4493 aa10.86□□□□□ -0.67
AC004540.1-202ENST00000430548 FAM229BQ4G0N7 80 aa10.86□□□□□ -0.67
AC004540.1-202ENST00000430548 KRTAP9-2Q9BYQ4 174 aa10.86□□□□□ -0.67
AC004540.1-202ENST00000430548 LINC01546A6NGU7 62 aa10.85□□□□□ -0.67
AC004540.1-202ENST00000430548 ADCYAP1P18509 176 aa10.85□□□□□ -0.67
AC004540.1-202ENST00000430548 SCGB3A1Q96QR1 104 aa10.85□□□□□ -0.67
AC004540.1-202ENST00000430548 ANAPC11Q9NYG5 84 aa10.85□□□□□ -0.67
AC004540.1-202ENST00000430548 GAGE10A6NGK3 116 aa10.84□□□□□ -0.67
AC004540.1-202ENST00000430548 LINC01549A6NIU2 74 aa10.84□□□□□ -0.67
AC004540.1-202ENST00000430548 UBE2AP49459 152 aa10.82□□□□□ -0.68
AC004540.1-202ENST00000430548 KIAA1644Q3SXP7 199 aa10.82□□□□□ -0.68
AC004540.1-202ENST00000430548 NKAPP1Q8N9T2 125 aa10.82□□□□□ -0.68
AC004540.1-202ENST00000430548 SPINK8P0C7L1 97 aa10.81□□□□□ -0.68
AC004540.1-202ENST00000430548 LINC00304Q8N9R0 145 aa10.81□□□□□ -0.68
AC004540.1-202ENST00000430548 CST9LQ9H4G1 147 aa10.81□□□□□ -0.68
AC004540.1-202ENST00000430548 TRAV9-1A0A075B6T8 112 aa10.8□□□□□ -0.68
AC004540.1-202ENST00000430548 CTAG1AP78358 180 aa10.8□□□□□ -0.68
AC004540.1-202ENST00000430548 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
AC004540.1-202ENST00000430548 RETNLBQ9BQ08 111 aa10.8□□□□□ -0.68
AC004540.1-202ENST00000430548 IGKV2-28A0A075B6P5 120 aa10.79□□□□□ -0.68
AC004540.1-202ENST00000430548 IGKV2D-28P01615 120 aa10.79□□□□□ -0.68
AC004540.1-202ENST00000430548 SCO1O75880 301 aa10.78□□□□□ -0.68
AC004540.1-202ENST00000430548 RAB5BP61020 215 aa10.78□□□□□ -0.68
AC004540.1-202ENST00000430548 PMVKQ15126 192 aa10.78□□□□□ -0.68
AC004540.1-202ENST00000430548 MRPL18Q9H0U6 180 aaKnown RBP10.78□□□□□ -0.68
AC004540.1-202ENST00000430548 IGLV5-39A0A0G2JS06 123 aa10.77□□□□□ -0.69
AC004540.1-202ENST00000430548 ATP5LO75964 103 aa10.77□□□□□ -0.69
AC004540.1-202ENST00000430548 VPREB1P12018 145 aa10.77□□□□□ -0.69
AC004540.1-202ENST00000430548 PRLHP81277 87 aa10.76□□□□□ -0.69
AC004540.1-202ENST00000430548 H3BRM9 83 aa10.75□□□□□ -0.69
AC004540.1-202ENST00000430548 IGLC3P0DOY3 106 aa10.75□□□□□ -0.69
AC004540.1-202ENST00000430548 GNB1LQ9BYB4 327 aa10.75□□□□□ -0.69
AC004540.1-202ENST00000430548 TMEM126AQ9H061 195 aa10.75□□□□□ -0.69
AC004540.1-202ENST00000430548 IGKV2D-26A0A0A0MRZ7 120 aa10.73□□□□□ -0.69
AC004540.1-202ENST00000430548 RAB14P61106 215 aa10.73□□□□□ -0.69
AC004540.1-202ENST00000430548 SND1-IT1Q9HBX3 110 aa10.73□□□□□ -0.69
AC004540.1-202ENST00000430548 TMEM238C9JI98 176 aa10.72□□□□□ -0.69
AC004540.1-202ENST00000430548 M0R378 163 aa10.72□□□□□ -0.69
AC004540.1-202ENST00000430548 PFN2P35080 140 aa10.72□□□□□ -0.69
AC004540.1-202ENST00000430548 FAM19A1Q7Z5A9 133 aa10.72□□□□□ -0.69
AC004540.1-202ENST00000430548 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
AC004540.1-202ENST00000430548 ZNF22P17026 224 aaPredicted RBP10.71□□□□□ -0.69
AC004540.1-202ENST00000430548 COX17Q14061 63 aa10.71□□□□□ -0.69
AC004540.1-202ENST00000430548 CLLU1Q5K131 121 aa10.71□□□□□ -0.69
AC004540.1-202ENST00000430548 Q8NDZ9 215 aa10.71□□□□□ -0.69
AC004540.1-202ENST00000430548 CDIP1Q9H305 208 aa10.71□□□□□ -0.69
AC004540.1-202ENST00000430548 IGLV7-46A0A075B6I9 117 aa10.7□□□□□ -0.7
AC004540.1-202ENST00000430548 A0A096LNJ9 63 aa10.7□□□□□ -0.7
AC004540.1-202ENST00000430548 PLEKHB2Q96CS7 222 aa10.7□□□□□ -0.7
AC004540.1-202ENST00000430548 FA2HQ7L5A8 372 aa10.69□□□□□ -0.7
AC004540.1-202ENST00000430548 RPL24P83731 157 aaKnown RBP10.68□□□□□ -0.7
AC004540.1-202ENST00000430548 COX19Q49B96 90 aa10.68□□□□□ -0.7
AC004540.1-202ENST00000430548 UQCC3Q6UW78 93 aa10.68□□□□□ -0.7
AC004540.1-202ENST00000430548 C3orf22Q8N5N4 141 aa10.68□□□□□ -0.7
AC004540.1-202ENST00000430548 SMCO4Q9NRQ5 59 aa10.68□□□□□ -0.7
AC004540.1-202ENST00000430548 TMEM218A2RU14 115 aa10.67□□□□□ -0.7
AC004540.1-202ENST00000430548 S100PP25815 95 aa10.66□□□□□ -0.7
AC004540.1-202ENST00000430548 SFTA2Q6UW10 78 aa10.65□□□□□ -0.7
AC004540.1-202ENST00000430548 CBLN2Q8IUK8 224 aa10.65□□□□□ -0.7
AC004540.1-202ENST00000430548 URB1-AS1Q96HZ7 61 aa10.64□□□□□ -0.71
AC004540.1-202ENST00000430548 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
AC004540.1-202ENST00000430548 PPDPFQ9H3Y8 114 aa10.64□□□□□ -0.71
AC004540.1-202ENST00000430548 SPRR4Q96PI1 79 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms