RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 IFITM1P13164 125 aa6.09□□□□□ -1.43
NR1I3-209ENST00000428574 C21orf62-AS1Q17RA5 79 aa6.09□□□□□ -1.43
NR1I3-209ENST00000428574 C5orf38Q86SI9 138 aa6.09□□□□□ -1.43
NR1I3-209ENST00000428574 SPANXDQ9BXN6 97 aa6.09□□□□□ -1.43
NR1I3-209ENST00000428574 SPANXCQ9NY87 97 aa6.09□□□□□ -1.43
NR1I3-209ENST00000428574 COX17Q14061 63 aa6.08□□□□□ -1.44
NR1I3-209ENST00000428574 C6orf226Q5I0X4 101 aa6.08□□□□□ -1.44
NR1I3-209ENST00000428574 BVES-AS1Q5T3Y7 98 aa6.08□□□□□ -1.44
NR1I3-209ENST00000428574 HIST1H4GQ99525 98 aa6.08□□□□□ -1.44
NR1I3-209ENST00000428574 SNHG12Q9BXW3 62 aa6.08□□□□□ -1.44
NR1I3-209ENST00000428574 DNAH7Q8WXX0 4024 aa6.08□□□□□ -1.44
NR1I3-209ENST00000428574 IGLV10-54A0A075B6I4 117 aa6.07□□□□□ -1.44
NR1I3-209ENST00000428574 GVQW2A0A096LPI5 108 aaPredicted RBP6.07□□□□□ -1.44
NR1I3-209ENST00000428574 A6NDN8 102 aa6.07□□□□□ -1.44
NR1I3-209ENST00000428574 C3orf84H3BNL1 204 aa6.07□□□□□ -1.44
NR1I3-209ENST00000428574 KIAA0087Q14695 138 aa6.07□□□□□ -1.44
NR1I3-209ENST00000428574 CEND1Q8N111 149 aa6.07□□□□□ -1.44
NR1I3-209ENST00000428574 ORAOV1Q8WV07 137 aa6.07□□□□□ -1.44
NR1I3-209ENST00000428574 C2orf48Q96LS8 159 aa6.07□□□□□ -1.44
NR1I3-209ENST00000428574 LITAFQ99732 161 aa6.07□□□□□ -1.44
NR1I3-209ENST00000428574 CKS1BP61024 79 aa6.06□□□□□ -1.44
NR1I3-209ENST00000428574 SPAG11BQ08648 103 aa6.06□□□□□ -1.44
NR1I3-209ENST00000428574 SRSF9Q13242 221 aaKnown RBP eCLIP6.06□□□□□ -1.44
NR1I3-209ENST00000428574 COL5A1-AS1Q5SY13 56 aa6.06□□□□□ -1.44
NR1I3-209ENST00000428574 IGKV2D-24A0A075B6R9 120 aa6.05□□□□□ -1.44
NR1I3-209ENST00000428574 A0A1B0GWB2 263 aa6.05□□□□□ -1.44
NR1I3-209ENST00000428574 HINT1P49773 126 aaPredicted RBP6.05□□□□□ -1.44
NR1I3-209ENST00000428574 RPL24P83731 157 aaKnown RBP6.05□□□□□ -1.44
NR1I3-209ENST00000428574 TOMM7Q9P0U1 55 aa6.05□□□□□ -1.44
NR1I3-209ENST00000428574 TRBV30A0A0K0K1B3 111 aa6.04□□□□□ -1.44
NR1I3-209ENST00000428574 NBDYA0A0U1RRE5 68 aa6.04□□□□□ -1.44
NR1I3-209ENST00000428574 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.03□□□□□ -1.44
NR1I3-209ENST00000428574 LOC107984156A0A0G2JMH3 177 aa6.03□□□□□ -1.44
NR1I3-209ENST00000428574 ZNF561-AS1K7EIQ3 104 aa6.03□□□□□ -1.44
NR1I3-209ENST00000428574 EREGO14944 169 aa6.03□□□□□ -1.44
NR1I3-209ENST00000428574 RNF151Q2KHN1 245 aa6.03□□□□□ -1.44
NR1I3-209ENST00000428574 MEIG1Q5JSS6 88 aa6.03□□□□□ -1.44
NR1I3-209ENST00000428574 ARL17AQ8IVW1 177 aa6.03□□□□□ -1.44
NR1I3-209ENST00000428574 C15orf56Q8N910 161 aa6.03□□□□□ -1.44
NR1I3-209ENST00000428574 NTN5Q8WTR8 489 aaPredicted RBP6.03□□□□□ -1.44
NR1I3-209ENST00000428574 ERG28Q9UKR5 140 aa6.03□□□□□ -1.44
NR1I3-209ENST00000428574 C14orf177Q52M58 125 aa6.02□□□□□ -1.45
NR1I3-209ENST00000428574 Q9HAA7 133 aa6.02□□□□□ -1.45
NR1I3-209ENST00000428574 A0A0B4J2C4 111 aa6.01□□□□□ -1.45
NR1I3-209ENST00000428574 FXYD2P54710 66 aa6.01□□□□□ -1.45
NR1I3-209ENST00000428574 CASC10Q5T4H9 136 aa6.01□□□□□ -1.45
NR1I3-209ENST00000428574 LINC00308Q8TCZ7 52 aa6.01□□□□□ -1.45
NR1I3-209ENST00000428574 BATFQ16520 125 aa6□□□□□ -1.45
NR1I3-209ENST00000428574 ADAMTSL4-AS1Q5T5F5 129 aa6□□□□□ -1.45
NR1I3-209ENST00000428574 KRTAP1-5Q9BYS1 174 aa6□□□□□ -1.45
NR1I3-209ENST00000428574 PKIGQ9Y2B9 76 aa6□□□□□ -1.45
NR1I3-209ENST00000428574 CSMD3Q7Z407 3707 aa5.99□□□□□ -1.45
NR1I3-209ENST00000428574 USP17L23D6RBM5 183 aa5.99□□□□□ -1.45
NR1I3-209ENST00000428574 SMIM13P0DJ93 91 aa5.99□□□□□ -1.45
NR1I3-209ENST00000428574 LINC00158P58513 81 aa5.99□□□□□ -1.45
NR1I3-209ENST00000428574 C2orf82Q6UX34 121 aa5.99□□□□□ -1.45
NR1I3-209ENST00000428574 Q6ZR54 194 aa5.99□□□□□ -1.45
NR1I3-209ENST00000428574 MUSTN1Q8IVN3 82 aa5.99□□□□□ -1.45
NR1I3-209ENST00000428574 MIR7-3HGQ8N6C7 128 aa5.99□□□□□ -1.45
NR1I3-209ENST00000428574 CAMK2N2Q96S95 79 aa5.99□□□□□ -1.45
NR1I3-209ENST00000428574 STARD9Q9P2P6 4700 aa5.99□□□□□ -1.45
NR1I3-209ENST00000428574 PSCAO43653 123 aa5.98□□□□□ -1.45
NR1I3-209ENST00000428574 NDUFC2O95298 119 aa5.98□□□□□ -1.45
NR1I3-209ENST00000428574 TLX1NBP0CAT3 122 aa5.98□□□□□ -1.45
NR1I3-209ENST00000428574 SYCNQ0VAF6 134 aa5.98□□□□□ -1.45
NR1I3-209ENST00000428574 LINC00476Q8WZB0 136 aa5.98□□□□□ -1.45
NR1I3-209ENST00000428574 NHP2Q9NX24 153 aaKnown RBP5.98□□□□□ -1.45
NR1I3-209ENST00000428574 A4D1N5 150 aa5.97□□□□□ -1.45
NR1I3-209ENST00000428574 CNBPP62633 177 aaKnown RBP5.97□□□□□ -1.45
NR1I3-209ENST00000428574 UNQ6190/PRO20217Q6UXQ8 127 aa5.97□□□□□ -1.45
NR1I3-209ENST00000428574 Q6ZRN7 208 aaPredicted RBP5.97□□□□□ -1.45
NR1I3-209ENST00000428574 NDUFC2-KCTD14E9PQ53 114 aa5.96□□□□□ -1.46
NR1I3-209ENST00000428574 TAX1BP3O14907 124 aa5.96□□□□□ -1.46
NR1I3-209ENST00000428574 CFC1BP0CG36 223 aa5.96□□□□□ -1.46
NR1I3-209ENST00000428574 CFC1P0CG37 223 aa5.96□□□□□ -1.46
NR1I3-209ENST00000428574 PFN2P35080 140 aa5.96□□□□□ -1.46
NR1I3-209ENST00000428574 HIGD2BQ4VC39 106 aa5.96□□□□□ -1.46
NR1I3-209ENST00000428574 CARD19Q96LW7 228 aa5.96□□□□□ -1.46
NR1I3-209ENST00000428574 C6orf48Q9UBA6 75 aa5.96□□□□□ -1.46
NR1I3-209ENST00000428574 PRO1854Q9UHT4 67 aa5.96□□□□□ -1.46
NR1I3-209ENST00000428574 PLECQ15149 4684 aaKnown RBP5.95□□□□□ -1.46
NR1I3-209ENST00000428574 TRAV13-2A0A0B4J235 113 aa5.95□□□□□ -1.46
NR1I3-209ENST00000428574 C9orf118A6NHY6 69 aa5.95□□□□□ -1.46
NR1I3-209ENST00000428574 C10orf25Q5T742 122 aa5.95□□□□□ -1.46
NR1I3-209ENST00000428574 LYRM7Q5U5X0 104 aa5.95□□□□□ -1.46
NR1I3-209ENST00000428574 SOSTDC1Q6X4U4 206 aa5.95□□□□□ -1.46
NR1I3-209ENST00000428574 Q6ZRU5 148 aa5.95□□□□□ -1.46
NR1I3-209ENST00000428574 C6orf223Q8N319 242 aa5.95□□□□□ -1.46
NR1I3-209ENST00000428574 RAB37Q96AX2 223 aa5.95□□□□□ -1.46
NR1I3-209ENST00000428574 DNAH1Q9P2D7 4330 aa5.95□□□□□ -1.46
NR1I3-209ENST00000428574 LRCOL1A6NCL2 159 aa5.94□□□□□ -1.46
NR1I3-209ENST00000428574 DAND5Q8N907 189 aa5.94□□□□□ -1.46
NR1I3-209ENST00000428574 SND1-IT1Q9HBX3 110 aa5.94□□□□□ -1.46
NR1I3-209ENST00000428574 TRBV10-2A0A0K0K1G8 114 aa5.93□□□□□ -1.46
NR1I3-209ENST00000428574 A0A0U1RRA0 63 aa5.92□□□□□ -1.46
NR1I3-209ENST00000428574 LOC107984640A0A0U1RRK4 108 aa5.92□□□□□ -1.46
NR1I3-209ENST00000428574 EIF4EBP3O60516 100 aaPredicted RBP5.92□□□□□ -1.46
NR1I3-209ENST00000428574 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
NR1I3-209ENST00000428574 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
NR1I3-209ENST00000428574 A0A1W2PPM0 123 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms