RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 C7orf33Q8WU49 177 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST1H2BHQ93079 126 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST1H2BNQ99877 126 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST1H2BMQ99879 126 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 PANO1I0J062 215 aa5.77□□□□□ -1.49
SMC1A-203ENST00000428014 RPL37AP61513 92 aaKnown RBP5.77□□□□□ -1.49
SMC1A-203ENST00000428014 KIAA0087Q14695 138 aa5.77□□□□□ -1.49
SMC1A-203ENST00000428014 Q6ZRU5 148 aa5.77□□□□□ -1.49
SMC1A-203ENST00000428014 FA2HQ7L5A8 372 aa5.77□□□□□ -1.49
SMC1A-203ENST00000428014 C5orf38Q86SI9 138 aa5.77□□□□□ -1.49
SMC1A-203ENST00000428014 OPRPNQ99935 248 aaPredicted RBP5.77□□□□□ -1.49
SMC1A-203ENST00000428014 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
SMC1A-203ENST00000428014 A0A096LNI7 61 aa5.76□□□□□ -1.49
SMC1A-203ENST00000428014 TINCRA0A1B0GVN0 87 aa5.76□□□□□ -1.49
SMC1A-203ENST00000428014 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.76□□□□□ -1.49
SMC1A-203ENST00000428014 RNASE13Q5GAN3 156 aaKnown RBP5.76□□□□□ -1.49
SMC1A-203ENST00000428014 BAGE3Q86Y29 109 aa5.76□□□□□ -1.49
SMC1A-203ENST00000428014 ORAOV1Q8WV07 137 aa5.76□□□□□ -1.49
SMC1A-203ENST00000428014 CHCHD1Q96BP2 118 aaKnown RBP5.76□□□□□ -1.49
SMC1A-203ENST00000428014 SCGB3A1Q96QR1 104 aa5.76□□□□□ -1.49
SMC1A-203ENST00000428014 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-203ENST00000428014 LINC00614P0C842 121 aa5.75□□□□□ -1.49
SMC1A-203ENST00000428014 PDZD11Q5EBL8 140 aa5.75□□□□□ -1.49
SMC1A-203ENST00000428014 COA6Q5JTJ3 125 aaKnown RBP5.75□□□□□ -1.49
SMC1A-203ENST00000428014 SFTA2Q6UW10 78 aa5.75□□□□□ -1.49
SMC1A-203ENST00000428014 STPG4Q8N801 248 aa5.75□□□□□ -1.49
SMC1A-203ENST00000428014 MYCBP2O75592 4640 aa5.75□□□□□ -1.49
SMC1A-203ENST00000428014 ATP5LO75964 103 aa5.74□□□□□ -1.49
SMC1A-203ENST00000428014 HAMPP81172 84 aa5.74□□□□□ -1.49
SMC1A-203ENST00000428014 PMVKQ15126 192 aa5.74□□□□□ -1.49
SMC1A-203ENST00000428014 MAJINQ3KP22 176 aa5.74□□□□□ -1.49
SMC1A-203ENST00000428014 GEMIN7Q9H840 131 aaKnown RBP5.74□□□□□ -1.49
SMC1A-203ENST00000428014 A0A0J9YXV3 536 aa5.73□□□□□ -1.49
SMC1A-203ENST00000428014 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
SMC1A-203ENST00000428014 NDUFC2-KCTD14E9PQ53 114 aa5.73□□□□□ -1.49
SMC1A-203ENST00000428014 HSBP1O75506 76 aa5.73□□□□□ -1.49
SMC1A-203ENST00000428014 HBDP02042 147 aa5.73□□□□□ -1.49
SMC1A-203ENST00000428014 S100A6P06703 90 aa5.73□□□□□ -1.49
SMC1A-203ENST00000428014 CHTF8P0CG12 524 aa5.73□□□□□ -1.49
SMC1A-203ENST00000428014 DPH3Q96FX2 82 aa5.73□□□□□ -1.49
SMC1A-203ENST00000428014 PACRGQ96M98 296 aaPredicted RBP5.73□□□□□ -1.49
SMC1A-203ENST00000428014 CST9LQ9H4G1 147 aa5.73□□□□□ -1.49
SMC1A-203ENST00000428014 SERF1AO75920 110 aa5.72□□□□□ -1.49
SMC1A-203ENST00000428014 PRSS2P07478 247 aa5.72□□□□□ -1.49
SMC1A-203ENST00000428014 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
SMC1A-203ENST00000428014 Q6ZRP5 223 aa5.72□□□□□ -1.49
SMC1A-203ENST00000428014 URB1-AS1Q96HZ7 61 aa5.72□□□□□ -1.49
SMC1A-203ENST00000428014 C6orf48Q9UBA6 75 aa5.72□□□□□ -1.49
SMC1A-203ENST00000428014 CDKN2A-AS1Q9UH64 79 aa5.72□□□□□ -1.49
SMC1A-203ENST00000428014 A0A096LNJ9 63 aa5.71□□□□□ -1.5
SMC1A-203ENST00000428014 IGKV2-24A0A0C4DH68 120 aa5.71□□□□□ -1.5
SMC1A-203ENST00000428014 C9orf118A6NHY6 69 aa5.71□□□□□ -1.5
SMC1A-203ENST00000428014 F8VRH5 84 aa5.71□□□□□ -1.5
SMC1A-203ENST00000428014 H3BRM9 83 aa5.71□□□□□ -1.5
SMC1A-203ENST00000428014 IGLC3P0DOY3 106 aa5.71□□□□□ -1.5
SMC1A-203ENST00000428014 NDUFA6P56556 154 aa5.71□□□□□ -1.5
SMC1A-203ENST00000428014 CKS1BP61024 79 aa5.71□□□□□ -1.5
SMC1A-203ENST00000428014 PRR3P79522 188 aaKnown RBP5.71□□□□□ -1.5
SMC1A-203ENST00000428014 C6orf226Q5I0X4 101 aa5.71□□□□□ -1.5
SMC1A-203ENST00000428014 LINC00526Q96FQ7 95 aa5.71□□□□□ -1.5
SMC1A-203ENST00000428014 TRAV12-1A0A0B4J245 112 aa5.7□□□□□ -1.5
SMC1A-203ENST00000428014 IGLV5-39A0A0G2JS06 123 aa5.7□□□□□ -1.5
SMC1A-203ENST00000428014 SMIM1B2RUZ4 78 aa5.7□□□□□ -1.5
SMC1A-203ENST00000428014 SPINK6Q6UWN8 80 aa5.7□□□□□ -1.5
SMC1A-203ENST00000428014 UNQ6190/PRO20217Q6UXQ8 127 aa5.7□□□□□ -1.5
SMC1A-203ENST00000428014 TP73-AS1Q9UF72 201 aa5.7□□□□□ -1.5
SMC1A-203ENST00000428014 GAGE2BQ13066 116 aa5.69□□□□□ -1.5
SMC1A-203ENST00000428014 C9orf116Q5BN46 136 aaPredicted RBP5.69□□□□□ -1.5
SMC1A-203ENST00000428014 LINC00469Q8N7U9 141 aa5.69□□□□□ -1.5
SMC1A-203ENST00000428014 C5orf52A6NGY3 159 aa5.68□□□□□ -1.5
SMC1A-203ENST00000428014 NUPR1O60356 82 aa5.68□□□□□ -1.5
SMC1A-203ENST00000428014 RPL18AQ02543 176 aaKnown RBP5.68□□□□□ -1.5
SMC1A-203ENST00000428014 SRSF9Q13242 221 aaKnown RBP eCLIP5.68□□□□□ -1.5
SMC1A-203ENST00000428014 COX17Q14061 63 aa5.68□□□□□ -1.5
SMC1A-203ENST00000428014 C10orf25Q5T742 122 aa5.68□□□□□ -1.5
SMC1A-203ENST00000428014 A0A1W2PNN7 141 aa5.67□□□□□ -1.5
SMC1A-203ENST00000428014 LEPROTL1O95214 131 aa5.67□□□□□ -1.5
SMC1A-203ENST00000428014 S100A2P29034 98 aa5.67□□□□□ -1.5
SMC1A-203ENST00000428014 SNRPEP62304 92 aaKnown RBP5.67□□□□□ -1.5
SMC1A-203ENST00000428014 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
SMC1A-203ENST00000428014 HIST3H2BBQ8N257 126 aa5.67□□□□□ -1.5
SMC1A-203ENST00000428014 FAM19A2Q8N3H0 131 aa5.67□□□□□ -1.5
SMC1A-203ENST00000428014 COX7B2Q8TF08 81 aa5.67□□□□□ -1.5
SMC1A-203ENST00000428014 HSPB8Q9UJY1 196 aa5.67□□□□□ -1.5
SMC1A-203ENST00000428014 PMCHL1Q16048 86 aa5.66□□□□□ -1.5
SMC1A-203ENST00000428014 ZC2HC1BQ5TFG8 222 aa5.66□□□□□ -1.5
SMC1A-203ENST00000428014 IGLV5-37A0A075B6J1 123 aa5.65□□□□□ -1.5
SMC1A-203ENST00000428014 ZNF22P17026 224 aaPredicted RBP5.65□□□□□ -1.5
SMC1A-203ENST00000428014 HNRNPA3P51991 378 aaKnown RBP5.65□□□□□ -1.5
SMC1A-203ENST00000428014 LBHQ53QV2 105 aaPredicted RBP5.65□□□□□ -1.5
SMC1A-203ENST00000428014 REG3GQ6UW15 175 aa5.65□□□□□ -1.5
SMC1A-203ENST00000428014 C2orf82Q6UX34 121 aa5.65□□□□□ -1.5
SMC1A-203ENST00000428014 IFI27L1Q96BM0 104 aa5.65□□□□□ -1.5
SMC1A-203ENST00000428014 LINC01600Q96MT4 127 aa5.65□□□□□ -1.5
SMC1A-203ENST00000428014 FABP4P15090 132 aa5.64□□□□□ -1.51
SMC1A-203ENST00000428014 C9orf129Q5T035 196 aaKnown RBP5.64□□□□□ -1.51
SMC1A-203ENST00000428014 HIST1H2BLQ99880 126 aa5.64□□□□□ -1.51
SMC1A-203ENST00000428014 TOMM7Q9P0U1 55 aa5.64□□□□□ -1.51
SMC1A-203ENST00000428014 LINC00587B1AMM8 73 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms