RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 SMIM1B2RUZ4 78 aa9.46□□□□□ -0.9
KDM3A-204ENST00000427678 STPG4Q8N801 248 aa9.46□□□□□ -0.9
KDM3A-204ENST00000427678 PLAC8Q9NZF1 115 aa9.46□□□□□ -0.9
KDM3A-204ENST00000427678 C6orf48Q9UBA6 75 aa9.46□□□□□ -0.9
KDM3A-204ENST00000427678 TRAV12-1A0A0B4J245 112 aa9.45□□□□□ -0.9
KDM3A-204ENST00000427678 LEPROTL1O95214 131 aa9.45□□□□□ -0.9
KDM3A-204ENST00000427678 RPL18AQ02543 176 aaKnown RBP9.45□□□□□ -0.9
KDM3A-204ENST00000427678 CHTOPQ9Y3Y2 248 aaKnown RBP9.45□□□□□ -0.9
KDM3A-204ENST00000427678 NUPR1O60356 82 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST1H2BKO60814 126 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST1H2BJP06899 126 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 SPINK8P0C7L1 97 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST1H2BOP23527 126 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST1H2BBP33778 126 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 CXCL5P42830 114 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST1H2BDP58876 126 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 LINC00310P59036 64 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST1H2BCP62807 126 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST2H2BEQ16778 126 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.44□□□□□ -0.9
KDM3A-204ENST00000427678 COX7B2Q8TF08 81 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST1H2BHQ93079 126 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST1H2BNQ99877 126 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HIST1H2BMQ99879 126 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 HSPB8Q9UJY1 196 aa9.44□□□□□ -0.9
KDM3A-204ENST00000427678 TLX1NBP0CAT3 122 aa9.43□□□□□ -0.9
KDM3A-204ENST00000427678 C11orf86A6NJI1 115 aa9.42□□□□□ -0.9
KDM3A-204ENST00000427678 F8VRH5 84 aa9.42□□□□□ -0.9
KDM3A-204ENST00000427678 ATP6V1G1O75348 118 aa9.42□□□□□ -0.9
KDM3A-204ENST00000427678 ZNF22P17026 224 aaPredicted RBP9.42□□□□□ -0.9
KDM3A-204ENST00000427678 TMEM170BQ5T4T1 132 aa9.42□□□□□ -0.9
KDM3A-204ENST00000427678 FAT1Q14517 4588 aa9.41□□□□□ -0.9
KDM3A-204ENST00000427678 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
KDM3A-204ENST00000427678 FABP4P15090 132 aa9.41□□□□□ -0.9
KDM3A-204ENST00000427678 Q6ZRP5 223 aa9.41□□□□□ -0.9
KDM3A-204ENST00000427678 IGLV5-39A0A0G2JS06 123 aa9.4□□□□□ -0.9
KDM3A-204ENST00000427678 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.9
KDM3A-204ENST00000427678 GAGE2EQ4V326 116 aa9.4□□□□□ -0.9
KDM3A-204ENST00000427678 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.9
KDM3A-204ENST00000427678 C7orf33Q8WU49 177 aa9.4□□□□□ -0.9
KDM3A-204ENST00000427678 GAGE2DQ9UEU5 116 aa9.4□□□□□ -0.9
KDM3A-204ENST00000427678 H0Y8G0 127 aa9.39□□□□□ -0.91
KDM3A-204ENST00000427678 RPL37AP61513 92 aaKnown RBP9.39□□□□□ -0.91
KDM3A-204ENST00000427678 A0A1W2PNN7 141 aa9.38□□□□□ -0.91
KDM3A-204ENST00000427678 ODF1Q14990 250 aa9.37□□□□□ -0.91
KDM3A-204ENST00000427678 MAP1LC3CQ9BXW4 147 aa9.37□□□□□ -0.91
KDM3A-204ENST00000427678 ABCA13Q86UQ4 5058 aa9.36□□□□□ -0.91
KDM3A-204ENST00000427678 SRRM2Q9UQ35 2752 aaKnown RBP9.35□□□□□ -0.91
KDM3A-204ENST00000427678 PCLOQ9Y6V0 5065 aa9.35□□□□□ -0.91
KDM3A-204ENST00000427678 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
KDM3A-204ENST00000427678 COA6Q5JTJ3 125 aaKnown RBP9.35□□□□□ -0.91
KDM3A-204ENST00000427678 PLNP26678 52 aa9.34□□□□□ -0.91
KDM3A-204ENST00000427678 KRTAP10-4P60372 401 aaPredicted RBP9.34□□□□□ -0.91
KDM3A-204ENST00000427678 SFTA2Q6UW10 78 aa9.34□□□□□ -0.91
KDM3A-204ENST00000427678 FAM168BA1KXE4 195 aa9.32□□□□□ -0.92
KDM3A-204ENST00000427678 DPM2O94777 84 aa9.32□□□□□ -0.92
KDM3A-204ENST00000427678 C9orf129Q5T035 196 aaKnown RBP9.32□□□□□ -0.92
KDM3A-204ENST00000427678 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
KDM3A-204ENST00000427678 XAGE1AQ9HD64 81 aa9.31□□□□□ -0.92
KDM3A-204ENST00000427678 SYS1-DBNDD2H3BUS1 97 aa9.3□□□□□ -0.92
KDM3A-204ENST00000427678 IGKCP01834 107 aa9.3□□□□□ -0.92
KDM3A-204ENST00000427678 PFN2P35080 140 aa9.3□□□□□ -0.92
KDM3A-204ENST00000427678 COX17Q14061 63 aa9.3□□□□□ -0.92
KDM3A-204ENST00000427678 PMCHL2Q9BQD1 86 aa9.3□□□□□ -0.92
KDM3A-204ENST00000427678 FLG2Q5D862 2391 aaPredicted RBP9.3□□□□□ -0.92
KDM3A-204ENST00000427678 PHF5AQ7RTV0 110 aaKnown RBP9.29□□□□□ -0.92
KDM3A-204ENST00000427678 ZNF625Q96I27 306 aaPredicted RBP9.29□□□□□ -0.92
KDM3A-204ENST00000427678 ERG28Q9UKR5 140 aa9.29□□□□□ -0.92
KDM3A-204ENST00000427678 HERVK_113P61574 105 aa9.28□□□□□ -0.92
KDM3A-204ENST00000427678 PRR3P79522 188 aaKnown RBP9.28□□□□□ -0.92
KDM3A-204ENST00000427678 PET117Q6UWS5 81 aa9.27□□□□□ -0.93
KDM3A-204ENST00000427678 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.93
KDM3A-204ENST00000427678 PLEKHB2Q96CS7 222 aa9.27□□□□□ -0.93
KDM3A-204ENST00000427678 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
KDM3A-204ENST00000427678 M0QXV9 152 aa9.26□□□□□ -0.93
KDM3A-204ENST00000427678 LEPROTO15243 131 aa9.25□□□□□ -0.93
KDM3A-204ENST00000427678 LINC00158P58513 81 aa9.25□□□□□ -0.93
KDM3A-204ENST00000427678 HERV-K104P63124 156 aa9.25□□□□□ -0.93
KDM3A-204ENST00000427678 LBHQ53QV2 105 aaPredicted RBP9.25□□□□□ -0.93
KDM3A-204ENST00000427678 SERTAD4-AS1Q5TG53 156 aa9.25□□□□□ -0.93
KDM3A-204ENST00000427678 NDUFA12Q9UI09 145 aa9.25□□□□□ -0.93
KDM3A-204ENST00000427678 C22orf24Q9Y442 160 aa9.25□□□□□ -0.93
KDM3A-204ENST00000427678 MYMXA0A1B0GTQ4 84 aa9.24□□□□□ -0.93
KDM3A-204ENST00000427678 LINC00587B1AMM8 73 aa9.24□□□□□ -0.93
KDM3A-204ENST00000427678 HNRNPA3P51991 378 aaKnown RBP9.24□□□□□ -0.93
KDM3A-204ENST00000427678 KRTDAPP60985 99 aa9.24□□□□□ -0.93
KDM3A-204ENST00000427678 UBE2BP63146 152 aa9.24□□□□□ -0.93
KDM3A-204ENST00000427678 LINC01545Q5VT33 79 aa9.24□□□□□ -0.93
KDM3A-204ENST00000427678 PLA2G2DQ9UNK4 145 aa9.24□□□□□ -0.93
KDM3A-204ENST00000427678 J3QQQ9 107 aa9.23□□□□□ -0.93
KDM3A-204ENST00000427678 C3orf79P0CE67 100 aa9.23□□□□□ -0.93
KDM3A-204ENST00000427678 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
KDM3A-204ENST00000427678 TP73-AS1Q9UF72 201 aa9.23□□□□□ -0.93
KDM3A-204ENST00000427678 PSORS1C2Q9UIG4 136 aa9.23□□□□□ -0.93
KDM3A-204ENST00000427678 LGALS3P17931 250 aaKnown RBP9.22□□□□□ -0.93
KDM3A-204ENST00000427678 S100A6P06703 90 aa9.21□□□□□ -0.94
KDM3A-204ENST00000427678 NMUP48645 174 aa9.21□□□□□ -0.94
KDM3A-204ENST00000427678 MEIG1Q5JSS6 88 aa9.21□□□□□ -0.94
KDM3A-204ENST00000427678 C1orf137Q5JT78 98 aa9.21□□□□□ -0.94
KDM3A-204ENST00000427678 MRPL55Q7Z7F7 128 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms