RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CASC2Q6XLA1 102 aa3.85□□□□□ -1.79
VTI1BP4-201ENST00000427516 ZCCHC13Q8WW36 166 aaKnown RBP3.85□□□□□ -1.79
VTI1BP4-201ENST00000427516 ARHGAP32A7KAX9 2087 aa3.85□□□□□ -1.79
VTI1BP4-201ENST00000427516 UTRNP46939 3433 aa3.85□□□□□ -1.79
VTI1BP4-201ENST00000427516 A0A096LNT2 108 aa3.84□□□□□ -1.79
VTI1BP4-201ENST00000427516 TRGV4A0A0C4DH28 118 aa3.84□□□□□ -1.79
VTI1BP4-201ENST00000427516 A0A1W2PNU3 283 aaPredicted RBP3.84□□□□□ -1.79
VTI1BP4-201ENST00000427516 A6NDX4 124 aa3.84□□□□□ -1.79
VTI1BP4-201ENST00000427516 A8MUN3 132 aa3.84□□□□□ -1.79
VTI1BP4-201ENST00000427516 DEFB131AP59861 70 aa3.84□□□□□ -1.79
VTI1BP4-201ENST00000427516 Q5VV11 94 aa3.84□□□□□ -1.79
VTI1BP4-201ENST00000427516 Q6ZSN1 163 aa3.84□□□□□ -1.79
VTI1BP4-201ENST00000427516 PRR15LQ9BU68 103 aa3.84□□□□□ -1.79
VTI1BP4-201ENST00000427516 TRANK1O15050 2925 aa3.84□□□□□ -1.8
VTI1BP4-201ENST00000427516 GVQW2A0A096LPI5 108 aaPredicted RBP3.83□□□□□ -1.8
VTI1BP4-201ENST00000427516 A6NN06 94 aa3.83□□□□□ -1.8
VTI1BP4-201ENST00000427516 SCXQ7RTU7 201 aa3.83□□□□□ -1.8
VTI1BP4-201ENST00000427516 KCNQ1DNQ9H478 68 aa3.83□□□□□ -1.8
VTI1BP4-201ENST00000427516 FAM186AA6NE01 2351 aa3.82□□□□□ -1.8
VTI1BP4-201ENST00000427516 C16orf90A8MZG2 172 aa3.82□□□□□ -1.8
VTI1BP4-201ENST00000427516 PRM2P04554 102 aa3.82□□□□□ -1.8
VTI1BP4-201ENST00000427516 C11orf71Q6IPW1 123 aa3.82□□□□□ -1.8
VTI1BP4-201ENST00000427516 SMIM29Q86T20 159 aa3.82□□□□□ -1.8
VTI1BP4-201ENST00000427516 WFDC10AQ9H1F0 79 aa3.82□□□□□ -1.8
VTI1BP4-201ENST00000427516 ABCA1O95477 2261 aa3.82□□□□□ -1.8
VTI1BP4-201ENST00000427516 IGKV3OR2-268A0A0C4DH90 116 aa3.81□□□□□ -1.8
VTI1BP4-201ENST00000427516 A0A0J9YWU9 116 aa3.81□□□□□ -1.8
VTI1BP4-201ENST00000427516 C8orf87E5RJ46 101 aa3.81□□□□□ -1.8
VTI1BP4-201ENST00000427516 H3BUX3 64 aa3.81□□□□□ -1.8
VTI1BP4-201ENST00000427516 IGHV4-30-4P0DP06 118 aa3.81□□□□□ -1.8
VTI1BP4-201ENST00000427516 C9orf116Q5BN46 136 aaPredicted RBP3.81□□□□□ -1.8
VTI1BP4-201ENST00000427516 Q8N9P0 234 aaPredicted RBP3.81□□□□□ -1.8
VTI1BP4-201ENST00000427516 ARRDC1-AS1Q9H2J1 176 aa3.81□□□□□ -1.8
VTI1BP4-201ENST00000427516 FAM30AQ9NZY2 134 aa3.81□□□□□ -1.8
VTI1BP4-201ENST00000427516 DHRS4-AS1Q9P1J3 65 aa3.81□□□□□ -1.8
VTI1BP4-201ENST00000427516 KHDC1LQ5JSQ8 128 aa3.8□□□□□ -1.8
VTI1BP4-201ENST00000427516 MAP6D1Q9H9H5 199 aa3.8□□□□□ -1.8
VTI1BP4-201ENST00000427516 PLCE1Q9P212 2302 aa3.79□□□□□ -1.8
VTI1BP4-201ENST00000427516 IGLV4-60A0A075B6I1 120 aa3.79□□□□□ -1.8
VTI1BP4-201ENST00000427516 IGLV5-48A0A075B6I7 105 aa3.79□□□□□ -1.8
VTI1BP4-201ENST00000427516 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.79□□□□□ -1.8
VTI1BP4-201ENST00000427516 ADORA2A-AS1P86434 159 aa3.79□□□□□ -1.8
VTI1BP4-201ENST00000427516 SPAG11BQ08648 103 aa3.79□□□□□ -1.8
VTI1BP4-201ENST00000427516 KIAA0087Q14695 138 aa3.79□□□□□ -1.8
VTI1BP4-201ENST00000427516 C10orf25Q5T742 122 aa3.79□□□□□ -1.8
VTI1BP4-201ENST00000427516 LINC01006Q8NI28 216 aa3.79□□□□□ -1.8
VTI1BP4-201ENST00000427516 CHD7Q9P2D1 2997 aa3.79□□□□□ -1.8
VTI1BP4-201ENST00000427516 UNC80Q8N2C7 3258 aa3.78□□□□□ -1.8
VTI1BP4-201ENST00000427516 CHD9Q3L8U1 2897 aa3.78□□□□□ -1.8
VTI1BP4-201ENST00000427516 KPRPQ5T749 579 aaPredicted RBP3.78□□□□□ -1.8
VTI1BP4-201ENST00000427516 POLEQ07864 2286 aa3.78□□□□□ -1.8
VTI1BP4-201ENST00000427516 CADP27708 2225 aa3.77□□□□□ -1.81
VTI1BP4-201ENST00000427516 LRCOL1A6NCL2 159 aa3.77□□□□□ -1.81
VTI1BP4-201ENST00000427516 C3orf84H3BNL1 204 aa3.77□□□□□ -1.81
VTI1BP4-201ENST00000427516 LINC01554Q52M75 96 aa3.77□□□□□ -1.81
VTI1BP4-201ENST00000427516 Q8NBF4 154 aa3.77□□□□□ -1.81
VTI1BP4-201ENST00000427516 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
VTI1BP4-201ENST00000427516 C19orf84I3L1E1 186 aa3.76□□□□□ -1.81
VTI1BP4-201ENST00000427516 M0R2N4 97 aa3.76□□□□□ -1.81
VTI1BP4-201ENST00000427516 LY6EQ16553 131 aa3.76□□□□□ -1.81
VTI1BP4-201ENST00000427516 C4orf3Q8WVX3 66 aa3.76□□□□□ -1.81
VTI1BP4-201ENST00000427516 CHCHD10Q8WYQ3 142 aaPredicted RBP3.76□□□□□ -1.81
VTI1BP4-201ENST00000427516 SPRR4Q96PI1 79 aa3.76□□□□□ -1.81
VTI1BP4-201ENST00000427516 NOP10Q9NPE3 64 aaKnown RBP3.76□□□□□ -1.81
VTI1BP4-201ENST00000427516 RANBP2P49792 3224 aaKnown RBP3.76□□□□□ -1.81
VTI1BP4-201ENST00000427516 Q8N9L7 120 aa3.75□□□□□ -1.81
VTI1BP4-201ENST00000427516 C11orf45Q8TAV5 145 aa3.75□□□□□ -1.81
VTI1BP4-201ENST00000427516 ABCA4P78363 2273 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 ZNF318Q5VUA4 2279 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 RPL37AP8A6NKH3 93 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 H0Y9P7 68 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 DSCR9P59020 149 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 PRR3P79522 188 aaKnown RBP3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 REG3AQ06141 175 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 EGFEM1PQ0D2K5 195 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 C1orf137Q5JT78 98 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 TP53AIP1Q9HCN2 124 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 PRO0255Q9UI72 69 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 X6R8D5 127 aa3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 URB1O60287 2271 aaKnown RBP3.74□□□□□ -1.81
VTI1BP4-201ENST00000427516 ICE1Q9Y2F5 2266 aa3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 WNK2Q9Y3S1 2297 aa3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 IGLV7-46A0A075B6I9 117 aa3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 B4DSR2 109 aa3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 ANGP03950 147 aaKnown RBP3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 MSMBP08118 114 aa3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 SERTAD4-AS1Q5TG53 156 aa3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 BRD3OSQ6XYD6 125 aa3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 COA5Q86WW8 74 aa3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 RETNLBQ9BQ08 111 aa3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 KRTAP3-1Q9BYR8 98 aa3.73□□□□□ -1.81
VTI1BP4-201ENST00000427516 CYSRT1A8MQ03 144 aa3.72□□□□□ -1.81
VTI1BP4-201ENST00000427516 MOBPQ13875 183 aa3.72□□□□□ -1.81
VTI1BP4-201ENST00000427516 KLK12Q9UKR0 248 aa3.72□□□□□ -1.81
VTI1BP4-201ENST00000427516 CUL9Q8IWT3 2517 aa3.72□□□□□ -1.81
VTI1BP4-201ENST00000427516 AHCTF1Q8WYP5 2266 aa3.72□□□□□ -1.81
VTI1BP4-201ENST00000427516 C5orf42Q9H799 3197 aa3.71□□□□□ -1.82
VTI1BP4-201ENST00000427516 GYPEP15421 78 aa3.71□□□□□ -1.82
VTI1BP4-201ENST00000427516 CNBPP62633 177 aaKnown RBP3.71□□□□□ -1.82
VTI1BP4-201ENST00000427516 CACNA1BQ00975 2339 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms