RNA–Protein interactions for RNA: ENST00000426612.5

FGFR4-204, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-204ENST00000426612 TOMM7Q9P0U1 55 aa12.98□□□□□ -0.33
FGFR4-204ENST00000426612 MYCBP2O75592 4640 aa12.97□□□□□ -0.33
FGFR4-204ENST00000426612 PDZD11Q5EBL8 140 aa12.97□□□□□ -0.33
FGFR4-204ENST00000426612 C2orf82Q6UX34 121 aa12.97□□□□□ -0.33
FGFR4-204ENST00000426612 CXCL5P42830 114 aa12.96□□□□□ -0.33
FGFR4-204ENST00000426612 PMCHL1Q16048 86 aa12.96□□□□□ -0.33
FGFR4-204ENST00000426612 H3BRM9 83 aa12.95□□□□□ -0.34
FGFR4-204ENST00000426612 SMIM1B2RUZ4 78 aa12.94□□□□□ -0.34
FGFR4-204ENST00000426612 IGLC3P0DOY3 106 aa12.94□□□□□ -0.34
FGFR4-204ENST00000426612 NDUFA6P56556 154 aa12.94□□□□□ -0.34
FGFR4-204ENST00000426612 NDUFC2-KCTD14E9PQ53 114 aa12.93□□□□□ -0.34
FGFR4-204ENST00000426612 TRGC2P03986 189 aa12.93□□□□□ -0.34
FGFR4-204ENST00000426612 Q6ZRP5 223 aa12.93□□□□□ -0.34
FGFR4-204ENST00000426612 F8VRH5 84 aa12.92□□□□□ -0.34
FGFR4-204ENST00000426612 C9orf116Q5BN46 136 aaPredicted RBP12.92□□□□□ -0.34
FGFR4-204ENST00000426612 BAGE3Q86Y29 109 aa12.92□□□□□ -0.34
FGFR4-204ENST00000426612 HSBP1O75506 76 aa12.91□□□□□ -0.34
FGFR4-204ENST00000426612 A0A1W2PNN7 141 aa12.9□□□□□ -0.34
FGFR4-204ENST00000426612 COLCA2A8K830 154 aa12.9□□□□□ -0.34
FGFR4-204ENST00000426612 COX7B2Q8TF08 81 aa12.9□□□□□ -0.34
FGFR4-204ENST00000426612 PRR3P79522 188 aaKnown RBP12.89□□□□□ -0.35
FGFR4-204ENST00000426612 GAGE2EQ4V326 116 aa12.89□□□□□ -0.35
FGFR4-204ENST00000426612 GAGE2DQ9UEU5 116 aa12.89□□□□□ -0.35
FGFR4-204ENST00000426612 KRTAP29-1A8MX34 341 aaPredicted RBP12.88□□□□□ -0.35
FGFR4-204ENST00000426612 SPINK8P0C7L1 97 aa12.88□□□□□ -0.35
FGFR4-204ENST00000426612 IFI27L1Q96BM0 104 aa12.87□□□□□ -0.35
FGFR4-204ENST00000426612 J3QL48 77 aa12.86□□□□□ -0.35
FGFR4-204ENST00000426612 OXTP01178 125 aa12.86□□□□□ -0.35
FGFR4-204ENST00000426612 HNRNPA3P51991 378 aaKnown RBP12.86□□□□□ -0.35
FGFR4-204ENST00000426612 TRAV12-1A0A0B4J245 112 aa12.85□□□□□ -0.35
FGFR4-204ENST00000426612 ZNF22P17026 224 aaPredicted RBP12.85□□□□□ -0.35
FGFR4-204ENST00000426612 CHTOPQ9Y3Y2 248 aaKnown RBP12.85□□□□□ -0.35
FGFR4-204ENST00000426612 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
FGFR4-204ENST00000426612 PKHD1L1Q86WI1 4243 aa12.83□□□□□ -0.36
FGFR4-204ENST00000426612 C11orf86A6NJI1 115 aa12.82□□□□□ -0.36
FGFR4-204ENST00000426612 SERF1AO75920 110 aa12.82□□□□□ -0.36
FGFR4-204ENST00000426612 FAM19A2Q8N3H0 131 aa12.82□□□□□ -0.36
FGFR4-204ENST00000426612 FAM168BA1KXE4 195 aa12.81□□□□□ -0.36
FGFR4-204ENST00000426612 C9orf129Q5T035 196 aaKnown RBP12.81□□□□□ -0.36
FGFR4-204ENST00000426612 TMEM170BQ5T4T1 132 aa12.81□□□□□ -0.36
FGFR4-204ENST00000426612 SFTA2Q6UW10 78 aa12.81□□□□□ -0.36
FGFR4-204ENST00000426612 FAM19A5Q7Z5A7 132 aaPredicted RBP12.81□□□□□ -0.36
FGFR4-204ENST00000426612 LEPROTL1O95214 131 aa12.8□□□□□ -0.36
FGFR4-204ENST00000426612 PHF5AQ7RTV0 110 aaKnown RBP12.8□□□□□ -0.36
FGFR4-204ENST00000426612 M0QXV9 152 aa12.78□□□□□ -0.36
FGFR4-204ENST00000426612 ODF1Q14990 250 aa12.78□□□□□ -0.36
FGFR4-204ENST00000426612 LINC00310P59036 64 aa12.77□□□□□ -0.37
FGFR4-204ENST00000426612 PSORS1C2Q9UIG4 136 aa12.77□□□□□ -0.37
FGFR4-204ENST00000426612 HSPB8Q9UJY1 196 aa12.77□□□□□ -0.37
FGFR4-204ENST00000426612 LRP1Q07954 4544 aaKnown RBP12.77□□□□□ -0.37
FGFR4-204ENST00000426612 SCO1O75880 301 aa12.76□□□□□ -0.37
FGFR4-204ENST00000426612 SPINK6Q6UWN8 80 aa12.76□□□□□ -0.37
FGFR4-204ENST00000426612 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
FGFR4-204ENST00000426612 KRTAP7-1Q8IUC3 87 aa12.75□□□□□ -0.37
FGFR4-204ENST00000426612 COX17Q14061 63 aa12.74□□□□□ -0.37
FGFR4-204ENST00000426612 TMEM223A0PJW6 202 aa12.73□□□□□ -0.37
FGFR4-204ENST00000426612 UBE2BP63146 152 aa12.72□□□□□ -0.37
FGFR4-204ENST00000426612 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.37
FGFR4-204ENST00000426612 C1orf137Q5JT78 98 aa12.72□□□□□ -0.37
FGFR4-204ENST00000426612 FAT3Q8TDW7 4589 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 NUPR1O60356 82 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST1H2BKO60814 126 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST1H2BJP06899 126 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST1H2BOP23527 126 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST1H2BBP33778 126 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST1H2BDP58876 126 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST1H2BCP62807 126 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST2H2BEQ16778 126 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 LBHQ53QV2 105 aaPredicted RBP12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST1H2BHQ93079 126 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST1H2BNQ99877 126 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HIST1H2BMQ99879 126 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 TP73-AS1Q9UF72 201 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 PLA2G2DQ9UNK4 145 aa12.71□□□□□ -0.37
FGFR4-204ENST00000426612 HERC1Q15751 4861 aa12.7□□□□□ -0.38
FGFR4-204ENST00000426612 H0Y8G0 127 aa12.7□□□□□ -0.38
FGFR4-204ENST00000426612 SERTAD4-AS1Q5TG53 156 aa12.7□□□□□ -0.38
FGFR4-204ENST00000426612 REG3GQ6UW15 175 aa12.7□□□□□ -0.38
FGFR4-204ENST00000426612 ERG28Q9UKR5 140 aa12.7□□□□□ -0.38
FGFR4-204ENST00000426612 C22orf24Q9Y442 160 aa12.7□□□□□ -0.38
FGFR4-204ENST00000426612 FABP4P15090 132 aa12.69□□□□□ -0.38
FGFR4-204ENST00000426612 PLNP26678 52 aa12.69□□□□□ -0.38
FGFR4-204ENST00000426612 PFN2P35080 140 aa12.69□□□□□ -0.38
FGFR4-204ENST00000426612 ZNF625Q96I27 306 aaPredicted RBP12.69□□□□□ -0.38
FGFR4-204ENST00000426612 MRPL55Q7Z7F7 128 aaKnown RBP12.67□□□□□ -0.38
FGFR4-204ENST00000426612 MAP1LC3CQ9BXW4 147 aa12.67□□□□□ -0.38
FGFR4-204ENST00000426612 IGLV7-43P04211 117 aa12.66□□□□□ -0.38
FGFR4-204ENST00000426612 KRTAP11-1Q8IUC1 163 aa12.65□□□□□ -0.38
FGFR4-204ENST00000426612 IGLV5-37A0A075B6J1 123 aa12.64□□□□□ -0.39
FGFR4-204ENST00000426612 DPM2O94777 84 aa12.64□□□□□ -0.39
FGFR4-204ENST00000426612 NKAPP1Q8N9T2 125 aa12.63□□□□□ -0.39
FGFR4-204ENST00000426612 LINC01600Q96MT4 127 aa12.63□□□□□ -0.39
FGFR4-204ENST00000426612 SND1-IT1Q9HBX3 110 aa12.63□□□□□ -0.39
FGFR4-204ENST00000426612 HERV-K104P63124 156 aa12.62□□□□□ -0.39
FGFR4-204ENST00000426612 DIRC1Q969H9 104 aa12.62□□□□□ -0.39
FGFR4-204ENST00000426612 LINC00587B1AMM8 73 aa12.61□□□□□ -0.39
FGFR4-204ENST00000426612 IGKCP01834 107 aa12.61□□□□□ -0.39
FGFR4-204ENST00000426612 S100A1P23297 94 aa12.61□□□□□ -0.39
FGFR4-204ENST00000426612 HERVK_113P61574 105 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms