RNA–Protein interactions for RNA: ENST00000426612.5

FGFR4-204, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-204ENST00000426612 NISCHQ9Y2I1 1504 aa50.28■■■■■ 5.64
FGFR4-204ENST00000426612 CCDC180Q9P1Z9 1646 aa44.91■■■■■ 4.78
FGFR4-204ENST00000426612 ABCC9O60706 1549 aa43.76■■■■■ 4.6
FGFR4-204ENST00000426612 RB1CC1Q8TDY2 1594 aa42.22■■■■■ 4.35
FGFR4-204ENST00000426612 NACADO15069 1562 aa42.16■■■■■ 4.34
FGFR4-204ENST00000426612 MYO15BQ96JP2 1530 aa41.9■■■■■ 4.3
FGFR4-204ENST00000426612 DCAF8L2P0C7V8 631 aa41.89■■■■■ 4.3
FGFR4-204ENST00000426612 ZCCHC6Q5VYS8 1495 aaKnown RBP41.88■■■■■ 4.29
FGFR4-204ENST00000426612 DCAF1Q9Y4B6 1507 aa41.69■■■■■ 4.26
FGFR4-204ENST00000426612 UNC13AQ9UPW8 1703 aa41.35■■■■■ 4.21
FGFR4-204ENST00000426612 BICRAQ9NZM4 1560 aa40.87■■■■■ 4.13
FGFR4-204ENST00000426612 SCRIBQ14160 1630 aa40.81■■■■■ 4.12
FGFR4-204ENST00000426612 PABPN1Q86U42 306 aaKnown RBP eCLIP40.78■■■■■ 4.12
FGFR4-204ENST00000426612 SHROOM4Q9ULL8 1493 aa40.57■■■■■ 4.08
FGFR4-204ENST00000426612 DNAJC5BQ9UF47 199 aa40.1■■■■■ 4.01
FGFR4-204ENST00000426612 EIF4G1Q04637 1599 aaKnown RBP39.83■■■■□ 3.97
FGFR4-204ENST00000426612 CC2D2AQ9P2K1 1620 aa39.69■■■■□ 3.94
FGFR4-204ENST00000426612 CECR2Q9BXF3 1484 aa39.37■■■■□ 3.89
FGFR4-204ENST00000426612 SMARCA4P51532 1647 aa39.08■■■■□ 3.85
FGFR4-204ENST00000426612 BAZ1AQ9NRL2 1556 aaPredicted RBP39.04■■■■□ 3.84
FGFR4-204ENST00000426612 SMARCA2P51531 1590 aa38.87■■■■□ 3.81
FGFR4-204ENST00000426612 NCAPD3P42695 1498 aa38.83■■■■□ 3.81
FGFR4-204ENST00000426612 ATAD2BQ9ULI0 1458 aa38.8■■■■□ 3.8
FGFR4-204ENST00000426612 PEG3Q9GZU2 1588 aa38.74■■■■□ 3.79
FGFR4-204ENST00000426612 HMGXB3Q12766 1538 aa38.7■■■■□ 3.79
FGFR4-204ENST00000426612 MROH2BQ7Z745 1585 aa38.7■■■■□ 3.79
FGFR4-204ENST00000426612 BAZ1BQ9UIG0 1483 aaKnown RBP38.53■■■■□ 3.76
FGFR4-204ENST00000426612 WIZO95785 1651 aa38.34■■■■□ 3.73
FGFR4-204ENST00000426612 RSF1Q96T23 1441 aaPredicted RBP38.21■■■■□ 3.71
FGFR4-204ENST00000426612 TOP2AP11388 1531 aaKnown RBP37.95■■■■□ 3.67
FGFR4-204ENST00000426612 LAMC3Q9Y6N6 1575 aa37.9■■■■□ 3.66
FGFR4-204ENST00000426612 NESP48681 1621 aa37.83■■■■□ 3.65
FGFR4-204ENST00000426612 ERCC6Q03468 1493 aa37.79■■■■□ 3.64
FGFR4-204ENST00000426612 CADPSQ9ULU8 1353 aa37.66■■■■□ 3.62
FGFR4-204ENST00000426612 PDS5BQ9NTI5 1447 aa37.58■■■■□ 3.61
FGFR4-204ENST00000426612 KIF21AQ7Z4S6 1674 aa37.56■■■■□ 3.6
FGFR4-204ENST00000426612 CUX2O14529 1486 aa37.46■■■■□ 3.59
FGFR4-204ENST00000426612 CFTRP13569 1480 aa37.45■■■■□ 3.59
FGFR4-204ENST00000426612 PRDM2Q13029 1718 aa37.42■■■■□ 3.58
FGFR4-204ENST00000426612 CCDC88BA6NC98 1476 aa37.42■■■■□ 3.58
FGFR4-204ENST00000426612 THOC2Q8NI27 1593 aaKnown RBP37.41■■■■□ 3.58
FGFR4-204ENST00000426612 FANCD2Q9BXW9 1451 aa37.24■■■■□ 3.55
FGFR4-204ENST00000426612 CEP164Q9UPV0 1460 aa37.24■■■■□ 3.55
FGFR4-204ENST00000426612 MRC2Q9UBG0 1479 aa37.19■■■■□ 3.54
FGFR4-204ENST00000426612 WDR62O43379 1518 aa37.1■■■■□ 3.53
FGFR4-204ENST00000426612 SUPT5HO00267 1087 aaKnown RBP37.1■■■■□ 3.53
FGFR4-204ENST00000426612 URB2Q14146 1524 aaKnown RBP36.85■■■■□ 3.49
FGFR4-204ENST00000426612 ABCC8Q09428 1581 aa36.74■■■■□ 3.47
FGFR4-204ENST00000426612 DNMBPQ6XZF7 1577 aa36.66■■■■□ 3.46
FGFR4-204ENST00000426612 TOPBP1Q92547 1522 aa36.65■■■■□ 3.46
FGFR4-204ENST00000426612 IFT140Q96RY7 1462 aa36.45■■■■□ 3.43
FGFR4-204ENST00000426612 CUX1P39880 1505 aa36.33■■■■□ 3.41
FGFR4-204ENST00000426612 POLA1P09884 1462 aaPredicted RBP36.32■■■■□ 3.41
FGFR4-204ENST00000426612 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
FGFR4-204ENST00000426612 DNAJC5Q9H3Z4 198 aa36.28■■■■□ 3.4
FGFR4-204ENST00000426612 FGD5Q6ZNL6 1462 aa36.22■■■■□ 3.39
FGFR4-204ENST00000426612 ZNF608Q9ULD9 1512 aaPredicted RBP36.21■■■■□ 3.39
FGFR4-204ENST00000426612 EIF4G3O43432 1585 aaKnown RBP36.19■■■■□ 3.38
FGFR4-204ENST00000426612 SOGA1O94964 1423 aa36.15■■■■□ 3.38
FGFR4-204ENST00000426612 WDR97A6NE52 1622 aa36.13■■■■□ 3.37
FGFR4-204ENST00000426612 BIVM-ERCC5R4GMW8 1640 aa36.12■■■■□ 3.37
FGFR4-204ENST00000426612 RAD54L2Q9Y4B4 1467 aa36.1■■■■□ 3.37
FGFR4-204ENST00000426612 TOP2BQ02880 1626 aa36.08■■■■□ 3.37
FGFR4-204ENST00000426612 WRNQ14191 1432 aaPredicted RBP eCLIP36.07■■■■□ 3.36
FGFR4-204ENST00000426612 SYNJ1O43426 1573 aa36■■■■□ 3.35
FGFR4-204ENST00000426612 AQRO60306 1485 aaKnown RBP eCLIP35.99■■■■□ 3.351e-10■■■■■ 48.2
FGFR4-204ENST00000426612 ABCA10Q8WWZ4 1543 aa35.9■■■■□ 3.34
FGFR4-204ENST00000426612 TDRD9Q8NDG6 1382 aaKnown RBP35.89■■■■□ 3.34
FGFR4-204ENST00000426612 PBRM1Q86U86 1689 aa35.84■■■■□ 3.33
FGFR4-204ENST00000426612 CHD1O14646 1710 aa35.81■■■■□ 3.32
FGFR4-204ENST00000426612 OSCARQ8IYS5 282 aa35.81■■■■□ 3.32
FGFR4-204ENST00000426612 ABCA5Q8WWZ7 1642 aa35.81■■■■□ 3.32
FGFR4-204ENST00000426612 GRIN2BQ13224 1484 aa35.78■■■■□ 3.32
FGFR4-204ENST00000426612 GAPVD1Q14C86 1478 aa35.77■■■■□ 3.32
FGFR4-204ENST00000426612 MAGI1Q96QZ7 1491 aaPredicted RBP35.73■■■■□ 3.31
FGFR4-204ENST00000426612 SNAPC4Q5SXM2 1469 aa35.7■■■■□ 3.31
FGFR4-204ENST00000426612 SYNJ2O15056 1496 aa35.57■■■■□ 3.28
FGFR4-204ENST00000426612 FBLN2P98095 1184 aa35.55■■■■□ 3.28
FGFR4-204ENST00000426612 ERICH3Q5RHP9 1530 aa35.52■■■■□ 3.28
FGFR4-204ENST00000426612 CHMP7Q8WUX9 453 aaPredicted RBP35.49■■■■□ 3.27
FGFR4-204ENST00000426612 ADAMTS12P58397 1594 aa35.46■■■■□ 3.27
FGFR4-204ENST00000426612 FHAD1B1AJZ9 1412 aa35.35■■■■□ 3.25
FGFR4-204ENST00000426612 KIF27Q86VH2 1401 aa35.35■■■■□ 3.25
FGFR4-204ENST00000426612 CLASP1Q7Z460 1538 aa35.33■■■■□ 3.25
FGFR4-204ENST00000426612 RIMBP3CA6NJZ7 1639 aa35.32■■■■□ 3.25
FGFR4-204ENST00000426612 RIMBP3BA6NNM3 1639 aa35.32■■■■□ 3.25
FGFR4-204ENST00000426612 RIMBP3Q9UFD9 1639 aa35.32■■■■□ 3.25
FGFR4-204ENST00000426612 GRIN2AQ12879 1464 aa35.32■■■■□ 3.24
FGFR4-204ENST00000426612 ARHGEF11O15085 1522 aa35.27■■■■□ 3.24
FGFR4-204ENST00000426612 CUL7Q14999 1698 aa35.24■■■■□ 3.23
FGFR4-204ENST00000426612 NUP160Q12769 1436 aa35.15■■■■□ 3.22
FGFR4-204ENST00000426612 CEP170Q5SW79 1584 aa35.14■■■■□ 3.22
FGFR4-204ENST00000426612 IGF1RP08069 1367 aa35.13■■■■□ 3.21
FGFR4-204ENST00000426612 TRIM41Q8WV44 630 aa35.13■■■■□ 3.21
FGFR4-204ENST00000426612 SHROOM2Q13796 1616 aa34.99■■■■□ 3.19
FGFR4-204ENST00000426612 CARMIL1Q5VZK9 1371 aa34.95■■■■□ 3.19
FGFR4-204ENST00000426612 RUSC2Q8N2Y8 1516 aa34.95■■■■□ 3.19
FGFR4-204ENST00000426612 ARAP1Q96P48 1450 aa34.94■■■■□ 3.18
FGFR4-204ENST00000426612 CYB5RLQ6IPT4 315 aa34.86■■■■□ 3.17
FGFR4-204ENST00000426612 KIAA0586Q9BVV6 1533 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms