RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 A4D1N5 150 aa10.21□□□□□ -0.78
ACTB-204ENST00000425660 PRSS2P07478 247 aa10.21□□□□□ -0.78
ACTB-204ENST00000425660 RAB37Q96AX2 223 aa10.21□□□□□ -0.78
ACTB-204ENST00000425660 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.78
ACTB-204ENST00000425660 APOMO95445 188 aa10.2□□□□□ -0.78
ACTB-204ENST00000425660 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
ACTB-204ENST00000425660 CFC1P0CG37 223 aa10.2□□□□□ -0.78
ACTB-204ENST00000425660 CXCL5P42830 114 aa10.2□□□□□ -0.78
ACTB-204ENST00000425660 MEIG1Q5JSS6 88 aa10.2□□□□□ -0.78
ACTB-204ENST00000425660 IBA57-AS1B1ANH7 110 aa10.19□□□□□ -0.78
ACTB-204ENST00000425660 CSMD3Q7Z407 3707 aa10.19□□□□□ -0.78
ACTB-204ENST00000425660 DAND5Q8N907 189 aa10.19□□□□□ -0.78
ACTB-204ENST00000425660 APLNQ9ULZ1 77 aa10.19□□□□□ -0.78
ACTB-204ENST00000425660 TGP01266 2768 aa10.19□□□□□ -0.78
ACTB-204ENST00000425660 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
ACTB-204ENST00000425660 A0A0B4J2C4 111 aa10.18□□□□□ -0.78
ACTB-204ENST00000425660 LINC00308Q8TCZ7 52 aa10.18□□□□□ -0.78
ACTB-204ENST00000425660 H3BUT2 72 aa10.17□□□□□ -0.78
ACTB-204ENST00000425660 EIF4EBP3O60516 100 aaPredicted RBP10.17□□□□□ -0.78
ACTB-204ENST00000425660 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
ACTB-204ENST00000425660 NUPR2A6NF83 97 aa10.17□□□□□ -0.78
ACTB-204ENST00000425660 CKS1BP61024 79 aa10.17□□□□□ -0.78
ACTB-204ENST00000425660 C2orf82Q6UX34 121 aa10.17□□□□□ -0.78
ACTB-204ENST00000425660 C1orf43Q9BWL3 253 aa10.17□□□□□ -0.78
ACTB-204ENST00000425660 DNAH1Q9P2D7 4330 aa10.16□□□□□ -0.78
ACTB-204ENST00000425660 CFAP161Q6P656 301 aa10.16□□□□□ -0.78
ACTB-204ENST00000425660 A0A0U1RRA0 63 aa10.15□□□□□ -0.78
ACTB-204ENST00000425660 A0A1W2PPM0 123 aa10.15□□□□□ -0.78
ACTB-204ENST00000425660 SPAG11BQ08648 103 aa10.15□□□□□ -0.78
ACTB-204ENST00000425660 SOSTDC1Q6X4U4 206 aa10.15□□□□□ -0.78
ACTB-204ENST00000425660 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.78
ACTB-204ENST00000425660 ERG28Q9UKR5 140 aa10.15□□□□□ -0.78
ACTB-204ENST00000425660 LYSTQ99698 3801 aa10.15□□□□□ -0.78
ACTB-204ENST00000425660 NPC2P61916 151 aa10.14□□□□□ -0.79
ACTB-204ENST00000425660 DNAH7Q8WXX0 4024 aa10.14□□□□□ -0.79
ACTB-204ENST00000425660 COX17Q14061 63 aa10.14□□□□□ -0.79
ACTB-204ENST00000425660 VAMP3Q15836 100 aa10.14□□□□□ -0.79
ACTB-204ENST00000425660 MIR7-3HGQ8N6C7 128 aa10.14□□□□□ -0.79
ACTB-204ENST00000425660 NAA38Q9BRA0 125 aaKnown RBP10.14□□□□□ -0.79
ACTB-204ENST00000425660 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
ACTB-204ENST00000425660 PLECQ15149 4684 aaKnown RBP10.13□□□□□ -0.79
ACTB-204ENST00000425660 LINC00158P58513 81 aa10.12□□□□□ -0.79
ACTB-204ENST00000425660 IGKV2D-24A0A075B6R9 120 aa10.12□□□□□ -0.79
ACTB-204ENST00000425660 TSPAN13O95857 204 aa10.12□□□□□ -0.79
ACTB-204ENST00000425660 UBE2V1Q13404 147 aa10.12□□□□□ -0.79
ACTB-204ENST00000425660 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
ACTB-204ENST00000425660 FABP2P12104 132 aa10.11□□□□□ -0.79
ACTB-204ENST00000425660 PFN2P35080 140 aa10.11□□□□□ -0.79
ACTB-204ENST00000425660 C15orf56Q8N910 161 aa10.11□□□□□ -0.79
ACTB-204ENST00000425660 GVQW2A0A096LPI5 108 aaPredicted RBP10.1□□□□□ -0.79
ACTB-204ENST00000425660 C6orf223Q8N319 242 aa10.1□□□□□ -0.79
ACTB-204ENST00000425660 STARD9Q9P2P6 4700 aa10.1□□□□□ -0.79
ACTB-204ENST00000425660 LOC107984156A0A0G2JMH3 177 aa10.1□□□□□ -0.79
ACTB-204ENST00000425660 ARL17AQ8IVW1 177 aa10.1□□□□□ -0.79
ACTB-204ENST00000425660 Q9HAA7 133 aa10.1□□□□□ -0.79
ACTB-204ENST00000425660 C10orf25Q5T742 122 aa10.09□□□□□ -0.79
ACTB-204ENST00000425660 UNQ6190/PRO20217Q6UXQ8 127 aa10.09□□□□□ -0.79
ACTB-204ENST00000425660 MUC7Q8TAX7 377 aa10.09□□□□□ -0.79
ACTB-204ENST00000425660 LINC00526Q96FQ7 95 aa10.08□□□□□ -0.8
ACTB-204ENST00000425660 ZNF561-AS1K7EIQ3 104 aa10.07□□□□□ -0.8
ACTB-204ENST00000425660 K7EP34 96 aa10.07□□□□□ -0.8
ACTB-204ENST00000425660 RMI2Q96E14 147 aa10.07□□□□□ -0.8
ACTB-204ENST00000425660 GAGE10A6NGK3 116 aa10.07□□□□□ -0.8
ACTB-204ENST00000425660 GTF2H5Q6ZYL4 71 aa10.07□□□□□ -0.8
ACTB-204ENST00000425660 UBE2DNLQ8IWF7 75 aa10.07□□□□□ -0.8
ACTB-204ENST00000425660 C2orf48Q96LS8 159 aa10.07□□□□□ -0.8
ACTB-204ENST00000425660 SPCS1Q9Y6A9 102 aa10.07□□□□□ -0.8
ACTB-204ENST00000425660 TENM2Q9NT68 2774 aa10.06□□□□□ -0.8
ACTB-204ENST00000425660 F8WDY8 70 aa10.06□□□□□ -0.8
ACTB-204ENST00000425660 C9orf116Q5BN46 136 aaPredicted RBP10.06□□□□□ -0.8
ACTB-204ENST00000425660 SND1-IT1Q9HBX3 110 aa10.06□□□□□ -0.8
ACTB-204ENST00000425660 HIGD2BQ4VC39 106 aa10.05□□□□□ -0.8
ACTB-204ENST00000425660 KRTAP1-5Q9BYS1 174 aa10.05□□□□□ -0.8
ACTB-204ENST00000425660 TRBV30A0A0K0K1B3 111 aa10.05□□□□□ -0.8
ACTB-204ENST00000425660 C6orf48Q9UBA6 75 aa10.05□□□□□ -0.8
ACTB-204ENST00000425660 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
ACTB-204ENST00000425660 IGKV2-28A0A075B6P5 120 aa10.03□□□□□ -0.8
ACTB-204ENST00000425660 IGKV2D-28P01615 120 aa10.03□□□□□ -0.8
ACTB-204ENST00000425660 LYRM7Q5U5X0 104 aa10.03□□□□□ -0.8
ACTB-204ENST00000425660 RPL13AP40429 203 aaKnown RBP10.02□□□□□ -0.81
ACTB-204ENST00000425660 TRAV13-2A0A0B4J235 113 aa10.01□□□□□ -0.81
ACTB-204ENST00000425660 H7C2G1 150 aa10.01□□□□□ -0.81
ACTB-204ENST00000425660 NDUFC2O95298 119 aa10□□□□□ -0.81
ACTB-204ENST00000425660 Q1RN00 199 aa10□□□□□ -0.81
ACTB-204ENST00000425660 CASC10Q5T4H9 136 aa10□□□□□ -0.81
ACTB-204ENST00000425660 Q6ZRU5 148 aa10□□□□□ -0.81
ACTB-204ENST00000425660 USP17L23D6RBM5 183 aa10□□□□□ -0.81
ACTB-204ENST00000425660 LINC00337Q8N6G1 96 aa10□□□□□ -0.81
ACTB-204ENST00000425660 VPS13DQ5THJ4 4388 aa9.99□□□□□ -0.81
ACTB-204ENST00000425660 TRBV20-1A0A075B6N2 111 aa9.98□□□□□ -0.81
ACTB-204ENST00000425660 TRIAP1O43715 76 aa9.98□□□□□ -0.81
ACTB-204ENST00000425660 PSMB2P49721 201 aa9.98□□□□□ -0.81
ACTB-204ENST00000425660 TTC32Q5I0X7 151 aa9.98□□□□□ -0.81
ACTB-204ENST00000425660 SYCNQ0VAF6 134 aa9.98□□□□□ -0.81
ACTB-204ENST00000425660 NBDYA0A0U1RRE5 68 aa9.97□□□□□ -0.81
ACTB-204ENST00000425660 H3BMG7 143 aa9.97□□□□□ -0.81
ACTB-204ENST00000425660 DNAH10Q8IVF4 4471 aa9.97□□□□□ -0.81
ACTB-204ENST00000425660 NDUFC2-KCTD14E9PQ53 114 aa9.96□□□□□ -0.81
ACTB-204ENST00000425660 TCL1BO95988 128 aa9.96□□□□□ -0.82
ACTB-204ENST00000425660 SCGB1C2P0DMR2 95 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms