RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 SPINK8P0C7L1 97 aa13.16□□□□□ -0.3
HMGXB4-203ENST00000420166 FABP4P15090 132 aa13.16□□□□□ -0.3
HMGXB4-203ENST00000420166 C2orf82Q6UX34 121 aa13.16□□□□□ -0.3
HMGXB4-203ENST00000420166 SPACA4Q8TDM5 124 aa13.16□□□□□ -0.3
HMGXB4-203ENST00000420166 HSPB8Q9UJY1 196 aa13.16□□□□□ -0.3
HMGXB4-203ENST00000420166 IGKV2-24A0A0C4DH68 120 aa13.15□□□□□ -0.3
HMGXB4-203ENST00000420166 LOC107984640A0A0U1RRK4 108 aa13.15□□□□□ -0.3
HMGXB4-203ENST00000420166 SMR3BP02814 79 aaPredicted RBP13.15□□□□□ -0.3
HMGXB4-203ENST00000420166 C6orf226Q5I0X4 101 aa13.15□□□□□ -0.3
HMGXB4-203ENST00000420166 C6orf48Q9UBA6 75 aa13.14□□□□□ -0.31
HMGXB4-203ENST00000420166 F8VRH5 84 aa13.13□□□□□ -0.31
HMGXB4-203ENST00000420166 CKS1BP61024 79 aa13.13□□□□□ -0.31
HMGXB4-203ENST00000420166 COA6Q5JTJ3 125 aaKnown RBP13.13□□□□□ -0.31
HMGXB4-203ENST00000420166 TRBV30A0A0K0K1B3 111 aa13.12□□□□□ -0.31
HMGXB4-203ENST00000420166 MAJINQ3KP22 176 aa13.12□□□□□ -0.31
HMGXB4-203ENST00000420166 TMEM170BQ5T4T1 132 aa13.12□□□□□ -0.31
HMGXB4-203ENST00000420166 COX7B2Q8TF08 81 aa13.12□□□□□ -0.31
HMGXB4-203ENST00000420166 LINC00474Q9P2X8 69 aa13.12□□□□□ -0.31
HMGXB4-203ENST00000420166 H0Y8G0 127 aa13.11□□□□□ -0.31
HMGXB4-203ENST00000420166 CXCL5P42830 114 aa13.11□□□□□ -0.31
HMGXB4-203ENST00000420166 PTTG1IPP53801 180 aa13.11□□□□□ -0.31
HMGXB4-203ENST00000420166 ODF1Q14990 250 aa13.11□□□□□ -0.31
HMGXB4-203ENST00000420166 DPH3Q96FX2 82 aa13.11□□□□□ -0.31
HMGXB4-203ENST00000420166 A0A087WYN8 130 aa13.1□□□□□ -0.31
HMGXB4-203ENST00000420166 IGLV5-39A0A0G2JS06 123 aa13.1□□□□□ -0.31
HMGXB4-203ENST00000420166 GAGE2BQ13066 116 aa13.1□□□□□ -0.31
HMGXB4-203ENST00000420166 TLX1NBP0CAT3 122 aa13.09□□□□□ -0.31
HMGXB4-203ENST00000420166 RPL18AQ02543 176 aaKnown RBP13.09□□□□□ -0.31
HMGXB4-203ENST00000420166 PLAC8Q9NZF1 115 aa13.08□□□□□ -0.32
HMGXB4-203ENST00000420166 EPM2AB3EWF7 344 aa13.07□□□□□ -0.32
HMGXB4-203ENST00000420166 Q5VSD8 79 aa13.07□□□□□ -0.32
HMGXB4-203ENST00000420166 LINC00528Q8N1L1 170 aa13.07□□□□□ -0.32
HMGXB4-203ENST00000420166 MAP1LC3CQ9BXW4 147 aa13.07□□□□□ -0.32
HMGXB4-203ENST00000420166 KRTAP4-5Q9BYR2 181 aa13.07□□□□□ -0.32
HMGXB4-203ENST00000420166 C9orf116Q5BN46 136 aaPredicted RBP13.06□□□□□ -0.32
HMGXB4-203ENST00000420166 STPG4Q8N801 248 aa13.06□□□□□ -0.32
HMGXB4-203ENST00000420166 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
HMGXB4-203ENST00000420166 FAM229AH3BQW9 127 aa13.05□□□□□ -0.32
HMGXB4-203ENST00000420166 Q6ZRP5 223 aa13.05□□□□□ -0.32
HMGXB4-203ENST00000420166 NDUFC2-KCTD14E9PQ53 114 aa13.04□□□□□ -0.32
HMGXB4-203ENST00000420166 PLNP26678 52 aa13.03□□□□□ -0.32
HMGXB4-203ENST00000420166 FAT1Q14517 4588 aa13.02□□□□□ -0.33
HMGXB4-203ENST00000420166 DPM2O94777 84 aa13.02□□□□□ -0.33
HMGXB4-203ENST00000420166 PMCHL2Q9BQD1 86 aa13.02□□□□□ -0.33
HMGXB4-203ENST00000420166 SYS1-DBNDD2H3BUS1 97 aa13.01□□□□□ -0.33
HMGXB4-203ENST00000420166 GAGE2EQ4V326 116 aa13.01□□□□□ -0.33
HMGXB4-203ENST00000420166 GAGE2DQ9UEU5 116 aa13.01□□□□□ -0.33
HMGXB4-203ENST00000420166 IGKCP01834 107 aa12.99□□□□□ -0.33
HMGXB4-203ENST00000420166 A0A1W2PNN7 141 aa12.98□□□□□ -0.33
HMGXB4-203ENST00000420166 PLA2G1BP04054 148 aaKnown RBP12.98□□□□□ -0.33
HMGXB4-203ENST00000420166 PET117Q6UWS5 81 aa12.97□□□□□ -0.33
HMGXB4-203ENST00000420166 C3orf79P0CE67 100 aa12.96□□□□□ -0.33
HMGXB4-203ENST00000420166 SFTA2Q6UW10 78 aa12.96□□□□□ -0.33
HMGXB4-203ENST00000420166 ZNF625Q96I27 306 aaPredicted RBP12.96□□□□□ -0.33
HMGXB4-203ENST00000420166 C9orf129Q5T035 196 aaKnown RBP12.95□□□□□ -0.34
HMGXB4-203ENST00000420166 LINC01545Q5VT33 79 aa12.95□□□□□ -0.34
HMGXB4-203ENST00000420166 C7orf33Q8WU49 177 aa12.95□□□□□ -0.34
HMGXB4-203ENST00000420166 SRRM2Q9UQ35 2752 aaKnown RBP12.95□□□□□ -0.34
HMGXB4-203ENST00000420166 ABCA13Q86UQ4 5058 aa12.95□□□□□ -0.34
HMGXB4-203ENST00000420166 PCLOQ9Y6V0 5065 aa12.95□□□□□ -0.34
HMGXB4-203ENST00000420166 RPL37AP61513 92 aaKnown RBP12.94□□□□□ -0.34
HMGXB4-203ENST00000420166 FAM168BA1KXE4 195 aa12.93□□□□□ -0.34
HMGXB4-203ENST00000420166 KRTAP10-4P60372 401 aaPredicted RBP12.93□□□□□ -0.34
HMGXB4-203ENST00000420166 KRTDAPP60985 99 aa12.93□□□□□ -0.34
HMGXB4-203ENST00000420166 HERVK_113P61574 105 aa12.93□□□□□ -0.34
HMGXB4-203ENST00000420166 HIST3H2BBQ8N257 126 aa12.93□□□□□ -0.34
HMGXB4-203ENST00000420166 S100A6P06703 90 aa12.92□□□□□ -0.34
HMGXB4-203ENST00000420166 XAGE1AQ9HD64 81 aa12.92□□□□□ -0.34
HMGXB4-203ENST00000420166 ERG28Q9UKR5 140 aa12.92□□□□□ -0.34
HMGXB4-203ENST00000420166 LEPROTO15243 131 aa12.91□□□□□ -0.34
HMGXB4-203ENST00000420166 FAM19A5Q7Z5A7 132 aaPredicted RBP12.91□□□□□ -0.34
HMGXB4-203ENST00000420166 PLEKHB2Q96CS7 222 aa12.91□□□□□ -0.34
HMGXB4-203ENST00000420166 PFN2P35080 140 aa12.9□□□□□ -0.34
HMGXB4-203ENST00000420166 TSPEAR-AS2P59090 65 aa12.9□□□□□ -0.34
HMGXB4-203ENST00000420166 KRTAP7-1Q8IUC3 87 aa12.9□□□□□ -0.34
HMGXB4-203ENST00000420166 VPS13BQ7Z7G8 4022 aa12.89□□□□□ -0.35
HMGXB4-203ENST00000420166 S100A2P29034 98 aa12.89□□□□□ -0.35
HMGXB4-203ENST00000420166 COX17Q14061 63 aa12.89□□□□□ -0.35
HMGXB4-203ENST00000420166 NDUFA12Q9UI09 145 aa12.89□□□□□ -0.35
HMGXB4-203ENST00000420166 HIST1H2BLQ99880 126 aa12.88□□□□□ -0.35
HMGXB4-203ENST00000420166 J3QQQ9 107 aa12.87□□□□□ -0.35
HMGXB4-203ENST00000420166 INAFM2P0DMQ5 153 aa12.87□□□□□ -0.35
HMGXB4-203ENST00000420166 HERV-K104P63124 156 aa12.87□□□□□ -0.35
HMGXB4-203ENST00000420166 PHF5AQ7RTV0 110 aaKnown RBP12.87□□□□□ -0.35
HMGXB4-203ENST00000420166 MYMXA0A1B0GTQ4 84 aa12.86□□□□□ -0.35
HMGXB4-203ENST00000420166 C20orf202A1L168 122 aa12.86□□□□□ -0.35
HMGXB4-203ENST00000420166 E9PLD3 99 aa12.85□□□□□ -0.35
HMGXB4-203ENST00000420166 M0QXV9 152 aa12.85□□□□□ -0.35
HMGXB4-203ENST00000420166 SERTAD4-AS1Q5TG53 156 aa12.85□□□□□ -0.35
HMGXB4-203ENST00000420166 FLG2Q5D862 2391 aaPredicted RBP12.84□□□□□ -0.35
HMGXB4-203ENST00000420166 LGALS3P17931 250 aaKnown RBP12.84□□□□□ -0.35
HMGXB4-203ENST00000420166 SNRPEP62304 92 aaKnown RBP12.84□□□□□ -0.35
HMGXB4-203ENST00000420166 LINC00158P58513 81 aa12.83□□□□□ -0.36
HMGXB4-203ENST00000420166 PRR3P79522 188 aaKnown RBP12.83□□□□□ -0.36
HMGXB4-203ENST00000420166 SND1-IT1Q9HBX3 110 aa12.83□□□□□ -0.36
HMGXB4-203ENST00000420166 NMUP48645 174 aa12.82□□□□□ -0.36
HMGXB4-203ENST00000420166 MEIG1Q5JSS6 88 aa12.82□□□□□ -0.36
HMGXB4-203ENST00000420166 PLA2G2DQ9UNK4 145 aa12.82□□□□□ -0.36
HMGXB4-203ENST00000420166 C5orf52A6NGY3 159 aa12.81□□□□□ -0.36
HMGXB4-203ENST00000420166 A0A0U1RRA0 63 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms