RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ZNF625Q96I27 306 aaPredicted RBP14.2□□□□□ -0.14
GPC1-202ENST00000420138 IGLV10-54A0A075B6I4 117 aa14.19□□□□□ -0.14
GPC1-202ENST00000420138 CD164L2Q6UWJ8 174 aa14.19□□□□□ -0.14
GPC1-202ENST00000420138 ERG28Q9UKR5 140 aa14.18□□□□□ -0.14
GPC1-202ENST00000420138 SFTA2Q6UW10 78 aa14.17□□□□□ -0.14
GPC1-202ENST00000420138 COX7B2Q8TF08 81 aa14.17□□□□□ -0.14
GPC1-202ENST00000420138 HERV-K104P63124 156 aa14.16□□□□□ -0.14
GPC1-202ENST00000420138 FOXI1Q12951 378 aa14.16□□□□□ -0.14
GPC1-202ENST00000420138 LINC01561Q8N1V8 128 aa14.16□□□□□ -0.14
GPC1-202ENST00000420138 K7ERU9 68 aa14.15□□□□□ -0.14
GPC1-202ENST00000420138 PSMB2P49721 201 aa14.15□□□□□ -0.14
GPC1-202ENST00000420138 LINC01556Q5JQF7 62 aa14.15□□□□□ -0.14
GPC1-202ENST00000420138 LINC00588Q9Y4M8 146 aa14.15□□□□□ -0.14
GPC1-202ENST00000420138 NPC2P61916 151 aa14.14□□□□□ -0.15
GPC1-202ENST00000420138 TRBV20-1A0A075B6N2 111 aa14.13□□□□□ -0.15
GPC1-202ENST00000420138 SCGB1C2P0DMR2 95 aa14.13□□□□□ -0.15
GPC1-202ENST00000420138 DAND5Q8N907 189 aa14.13□□□□□ -0.15
GPC1-202ENST00000420138 UBE2WQ96B02 151 aa14.13□□□□□ -0.15
GPC1-202ENST00000420138 TOMM7Q9P0U1 55 aa14.13□□□□□ -0.15
GPC1-202ENST00000420138 COX7A2LO14548 114 aa14.12□□□□□ -0.15
GPC1-202ENST00000420138 WFDC2Q14508 124 aa14.12□□□□□ -0.15
GPC1-202ENST00000420138 MEIG1Q5JSS6 88 aa14.12□□□□□ -0.15
GPC1-202ENST00000420138 COPS9Q8WXC6 57 aa14.12□□□□□ -0.15
GPC1-202ENST00000420138 PRO0461Q9UI25 63 aa14.12□□□□□ -0.15
GPC1-202ENST00000420138 DNAH10OSP0CZ25 163 aa14.11□□□□□ -0.15
GPC1-202ENST00000420138 GAGE12HA6NDE8 117 aa14.11□□□□□ -0.15
GPC1-202ENST00000420138 H7C2G1 150 aa14.11□□□□□ -0.15
GPC1-202ENST00000420138 LINC00308Q8TCZ7 52 aa14.11□□□□□ -0.15
GPC1-202ENST00000420138 TCL1BO95988 128 aa14.1□□□□□ -0.15
GPC1-202ENST00000420138 Q1RN00 199 aa14.1□□□□□ -0.15
GPC1-202ENST00000420138 DYNC2H1Q8NCM8 4307 aaKnown RBP14.1□□□□□ -0.15
GPC1-202ENST00000420138 TRAV8-4A0A0B4J246 113 aa14.09□□□□□ -0.15
GPC1-202ENST00000420138 CRPP02741 224 aa14.09□□□□□ -0.15
GPC1-202ENST00000420138 KIAA0087Q14695 138 aa14.09□□□□□ -0.15
GPC1-202ENST00000420138 KRTAP26-1Q6PEX3 210 aa14.09□□□□□ -0.15
GPC1-202ENST00000420138 RNF151Q2KHN1 245 aa14.08□□□□□ -0.15
GPC1-202ENST00000420138 Q8IZM0 81 aa14.08□□□□□ -0.15
GPC1-202ENST00000420138 FBN3Q75N90 2809 aa14.08□□□□□ -0.16
GPC1-202ENST00000420138 A0A0U1RRA0 63 aa14.08□□□□□ -0.16
GPC1-202ENST00000420138 CCL18P55774 89 aa14.07□□□□□ -0.16
GPC1-202ENST00000420138 TRBV30A0A0K0K1B3 111 aa14.06□□□□□ -0.16
GPC1-202ENST00000420138 MTURNQ8N3F0 131 aa14.06□□□□□ -0.16
GPC1-202ENST00000420138 PPDPFQ9H3Y8 114 aa14.06□□□□□ -0.16
GPC1-202ENST00000420138 NUPR2A6NF83 97 aa14.05□□□□□ -0.16
GPC1-202ENST00000420138 C6orf226Q5I0X4 101 aa14.05□□□□□ -0.16
GPC1-202ENST00000420138 UPK3BQ9BT76 320 aa14.05□□□□□ -0.16
GPC1-202ENST00000420138 CBY1Q9Y3M2 126 aa14.05□□□□□ -0.16
GPC1-202ENST00000420138 MALP21145 153 aa14.04□□□□□ -0.16
GPC1-202ENST00000420138 APLNQ9ULZ1 77 aa14.04□□□□□ -0.16
GPC1-202ENST00000420138 SOSTDC1Q6X4U4 206 aa14.04□□□□□ -0.16
GPC1-202ENST00000420138 C2orf82Q6UX34 121 aa14.03□□□□□ -0.16
GPC1-202ENST00000420138 KLK5Q9Y337 293 aaPredicted RBP14.03□□□□□ -0.16
GPC1-202ENST00000420138 ETDBQ3ZM63 59 aa14.02□□□□□ -0.16
GPC1-202ENST00000420138 TRIAP1O43715 76 aa14.01□□□□□ -0.17
GPC1-202ENST00000420138 RPL13AP40429 203 aaKnown RBP14.01□□□□□ -0.17
GPC1-202ENST00000420138 SMCPP49901 116 aaPredicted RBP14.01□□□□□ -0.17
GPC1-202ENST00000420138 DNAH1Q9P2D7 4330 aa14.01□□□□□ -0.17
GPC1-202ENST00000420138 VPS25Q9BRG1 176 aa14.01□□□□□ -0.17
GPC1-202ENST00000420138 CSMD3Q7Z407 3707 aa14.01□□□□□ -0.17
GPC1-202ENST00000420138 IBA57-AS1B1ANH7 110 aa13.99□□□□□ -0.17
GPC1-202ENST00000420138 COX6CP09669 75 aa13.99□□□□□ -0.17
GPC1-202ENST00000420138 ATXN8Q156A1 80 aa13.99□□□□□ -0.17
GPC1-202ENST00000420138 MIR7-3HGQ8N6C7 128 aa13.97□□□□□ -0.17
GPC1-202ENST00000420138 CXCL5P42830 114 aa13.97□□□□□ -0.17
GPC1-202ENST00000420138 LINC00158P58513 81 aa13.97□□□□□ -0.17
GPC1-202ENST00000420138 CKS1BP61024 79 aa13.97□□□□□ -0.17
GPC1-202ENST00000420138 SPAG11BQ08648 103 aa13.97□□□□□ -0.17
GPC1-202ENST00000420138 C6orf223Q8N319 242 aa13.97□□□□□ -0.17
GPC1-202ENST00000420138 C1orf43Q9BWL3 253 aa13.97□□□□□ -0.17
GPC1-202ENST00000420138 PLECQ15149 4684 aaKnown RBP13.96□□□□□ -0.17
GPC1-202ENST00000420138 J3QR89 54 aa13.96□□□□□ -0.17
GPC1-202ENST00000420138 CFAP161Q6P656 301 aa13.96□□□□□ -0.17
GPC1-202ENST00000420138 DNAH7Q8WXX0 4024 aa13.95□□□□□ -0.18
GPC1-202ENST00000420138 LINC00526Q96FQ7 95 aa13.95□□□□□ -0.18
GPC1-202ENST00000420138 LYSTQ99698 3801 aa13.94□□□□□ -0.18
GPC1-202ENST00000420138 IGKV2D-24A0A075B6R9 120 aa13.94□□□□□ -0.18
GPC1-202ENST00000420138 Q9HAA7 133 aa13.94□□□□□ -0.18
GPC1-202ENST00000420138 C9JAW5 83 aa13.93□□□□□ -0.18
GPC1-202ENST00000420138 PFN2P35080 140 aa13.93□□□□□ -0.18
GPC1-202ENST00000420138 C10orf25Q5T742 122 aa13.93□□□□□ -0.18
GPC1-202ENST00000420138 C15orf56Q8N910 161 aa13.93□□□□□ -0.18
GPC1-202ENST00000420138 M0QXV9 152 aa13.92□□□□□ -0.18
GPC1-202ENST00000420138 LINC01620Q4KN68 170 aa13.92□□□□□ -0.18
GPC1-202ENST00000420138 SLC25A20O43772 301 aa13.92□□□□□ -0.18
GPC1-202ENST00000420138 UNQ6190/PRO20217Q6UXQ8 127 aa13.92□□□□□ -0.18
GPC1-202ENST00000420138 UBE2DNLQ8IWF7 75 aa13.92□□□□□ -0.18
GPC1-202ENST00000420138 NTN5Q8WTR8 489 aaPredicted RBP13.92□□□□□ -0.18
GPC1-202ENST00000420138 TGP01266 2768 aa13.92□□□□□ -0.18
GPC1-202ENST00000420138 MUC7Q8TAX7 377 aa13.91□□□□□ -0.18
GPC1-202ENST00000420138 STARD9Q9P2P6 4700 aa13.9□□□□□ -0.18
GPC1-202ENST00000420138 TEN1Q86WV5 123 aa13.9□□□□□ -0.18
GPC1-202ENST00000420138 SND1-IT1Q9HBX3 110 aa13.9□□□□□ -0.18
GPC1-202ENST00000420138 C9orf116Q5BN46 136 aaPredicted RBP13.9□□□□□ -0.18
GPC1-202ENST00000420138 WWC2-AS2Q96NR7 200 aa13.9□□□□□ -0.18
GPC1-202ENST00000420138 KRTAP1-5Q9BYS1 174 aa13.9□□□□□ -0.18
GPC1-202ENST00000420138 TRAV13-2A0A0B4J235 113 aa13.89□□□□□ -0.19
GPC1-202ENST00000420138 HIGD2BQ4VC39 106 aa13.88□□□□□ -0.19
GPC1-202ENST00000420138 COX17Q14061 63 aa13.87□□□□□ -0.19
GPC1-202ENST00000420138 CLEC2BQ92478 149 aa13.87□□□□□ -0.19
GPC1-202ENST00000420138 LST1O00453 97 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms