RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 IGLV4-3A0A075B6K6 122 aa5.84□□□□□ -1.47
NUP50-205ENST00000419387 IGHV3OR16-9A0A0B4J2B5 98 aa5.84□□□□□ -1.47
NUP50-205ENST00000419387 A0A0J9YXV3 536 aa5.84□□□□□ -1.47
NUP50-205ENST00000419387 F8WDY8 70 aa5.84□□□□□ -1.47
NUP50-205ENST00000419387 RPL18AQ02543 176 aaKnown RBP5.84□□□□□ -1.47
NUP50-205ENST00000419387 C9orf116Q5BN46 136 aaPredicted RBP5.84□□□□□ -1.47
NUP50-205ENST00000419387 ZC2HC1BQ5TFG8 222 aa5.84□□□□□ -1.47
NUP50-205ENST00000419387 REG3GQ6UW15 175 aa5.84□□□□□ -1.47
NUP50-205ENST00000419387 C2orf66Q6UXQ4 117 aa5.84□□□□□ -1.47
NUP50-205ENST00000419387 ORAOV1Q8WV07 137 aa5.84□□□□□ -1.47
NUP50-205ENST00000419387 TOMM6Q96B49 74 aa5.84□□□□□ -1.47
NUP50-205ENST00000419387 IFITM10A6NMD0 228 aa5.83□□□□□ -1.48
NUP50-205ENST00000419387 LINC00614P0C842 121 aa5.83□□□□□ -1.48
NUP50-205ENST00000419387 LINC00310P59036 64 aa5.83□□□□□ -1.48
NUP50-205ENST00000419387 ORMDL2Q53FV1 153 aa5.83□□□□□ -1.48
NUP50-205ENST00000419387 AMELXQ99217 191 aa5.83□□□□□ -1.48
NUP50-205ENST00000419387 MRPL35Q9NZE8 188 aaKnown RBP5.83□□□□□ -1.48
NUP50-205ENST00000419387 NDUFA1O15239 70 aa5.82□□□□□ -1.48
NUP50-205ENST00000419387 KRTAP10-8P60410 259 aa5.82□□□□□ -1.48
NUP50-205ENST00000419387 CYSLTR1Q9Y271 337 aa5.82□□□□□ -1.48
NUP50-205ENST00000419387 NUPR1O60356 82 aa5.81□□□□□ -1.48
NUP50-205ENST00000419387 ATP6V1G1O75348 118 aa5.81□□□□□ -1.48
NUP50-205ENST00000419387 NPSP0C0P6 89 aa5.81□□□□□ -1.48
NUP50-205ENST00000419387 C10orf25Q5T742 122 aa5.81□□□□□ -1.48
NUP50-205ENST00000419387 UNQ6190/PRO20217Q6UXQ8 127 aa5.81□□□□□ -1.48
NUP50-205ENST00000419387 ERASQ7Z444 233 aa5.81□□□□□ -1.48
NUP50-205ENST00000419387 PSORS1C2Q9UIG4 136 aa5.81□□□□□ -1.48
NUP50-205ENST00000419387 A0A087WZ39 114 aa5.8□□□□□ -1.48
NUP50-205ENST00000419387 TLX1NBP0CAT3 122 aa5.8□□□□□ -1.48
NUP50-205ENST00000419387 UBE2D1P51668 147 aa5.8□□□□□ -1.48
NUP50-205ENST00000419387 PMCHL1Q16048 86 aa5.8□□□□□ -1.48
NUP50-205ENST00000419387 PDZD11Q5EBL8 140 aa5.8□□□□□ -1.48
NUP50-205ENST00000419387 LINC00242Q5T6M2 205 aa5.8□□□□□ -1.48
NUP50-205ENST00000419387 PHF5AQ7RTV0 110 aaKnown RBP5.8□□□□□ -1.48
NUP50-205ENST00000419387 FAM19A3Q7Z5A8 133 aa5.8□□□□□ -1.48
NUP50-205ENST00000419387 TMEM141Q96I45 108 aa5.8□□□□□ -1.48
NUP50-205ENST00000419387 TIMM17AQ99595 171 aa5.8□□□□□ -1.48
NUP50-205ENST00000419387 S100A1P23297 94 aa5.79□□□□□ -1.48
NUP50-205ENST00000419387 KIAA0087Q14695 138 aa5.79□□□□□ -1.48
NUP50-205ENST00000419387 ODF1Q14990 250 aa5.79□□□□□ -1.48
NUP50-205ENST00000419387 C1orf137Q5JT78 98 aa5.79□□□□□ -1.48
NUP50-205ENST00000419387 TEX43Q6ZNM6 134 aa5.79□□□□□ -1.48
NUP50-205ENST00000419387 C6orf48Q9UBA6 75 aa5.79□□□□□ -1.48
NUP50-205ENST00000419387 FA2HQ7L5A8 372 aa5.78□□□□□ -1.48
NUP50-205ENST00000419387 LINC01561Q8N1V8 128 aa5.78□□□□□ -1.48
NUP50-205ENST00000419387 TRBV30A0A0K0K1B3 111 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 FAM168BA1KXE4 195 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST1H2BKO60814 126 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST1H2BJP06899 126 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST1H2BOP23527 126 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 G0S2P27469 103 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST1H2BBP33778 126 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST1H2BDP58876 126 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST1H2BCP62807 126 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST2H2BEQ16778 126 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 GAGE2EQ4V326 116 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.77□□□□□ -1.49
NUP50-205ENST00000419387 Q6ZN92 141 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST1H2BHQ93079 126 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 CHCHD1Q96BP2 118 aaKnown RBP5.77□□□□□ -1.49
NUP50-205ENST00000419387 SCGB3A1Q96QR1 104 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST1H2BNQ99877 126 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 HIST1H2BMQ99879 126 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 C2orf88Q9BSF0 95 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 VCX2Q9H322 139 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 CST9LQ9H4G1 147 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 GAGE2DQ9UEU5 116 aa5.77□□□□□ -1.49
NUP50-205ENST00000419387 IGLV7-43P04211 117 aa5.76□□□□□ -1.49
NUP50-205ENST00000419387 RAB5BP61020 215 aa5.76□□□□□ -1.49
NUP50-205ENST00000419387 FAM19A2Q8N3H0 131 aa5.76□□□□□ -1.49
NUP50-205ENST00000419387 PACRGQ96M98 296 aaPredicted RBP5.76□□□□□ -1.49
NUP50-205ENST00000419387 LINC01549A6NIU2 74 aa5.75□□□□□ -1.49
NUP50-205ENST00000419387 NDUFC2-KCTD14E9PQ53 114 aa5.75□□□□□ -1.49
NUP50-205ENST00000419387 SERF1AO75920 110 aa5.75□□□□□ -1.49
NUP50-205ENST00000419387 HBDP02042 147 aa5.75□□□□□ -1.49
NUP50-205ENST00000419387 C2orf82Q6UX34 121 aa5.75□□□□□ -1.49
NUP50-205ENST00000419387 FAM19A5Q7Z5A7 132 aaPredicted RBP5.75□□□□□ -1.49
NUP50-205ENST00000419387 KRTAP11-1Q8IUC1 163 aa5.75□□□□□ -1.49
NUP50-205ENST00000419387 LRP2P98164 4655 aa5.74□□□□□ -1.49
NUP50-205ENST00000419387 PRSS2P07478 247 aa5.74□□□□□ -1.49
NUP50-205ENST00000419387 KRTAP7-1Q8IUC3 87 aa5.74□□□□□ -1.49
NUP50-205ENST00000419387 DIRC1Q969H9 104 aa5.74□□□□□ -1.49
NUP50-205ENST00000419387 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
NUP50-205ENST00000419387 CDKN2A-AS1Q9UH64 79 aa5.74□□□□□ -1.49
NUP50-205ENST00000419387 IGLV5-45A0A087WSX0 123 aa5.73□□□□□ -1.49
NUP50-205ENST00000419387 M0QXV9 152 aa5.73□□□□□ -1.49
NUP50-205ENST00000419387 SEC11AP67812 179 aa5.73□□□□□ -1.49
NUP50-205ENST00000419387 PMVKQ15126 192 aa5.73□□□□□ -1.49
NUP50-205ENST00000419387 C6orf226Q5I0X4 101 aa5.73□□□□□ -1.49
NUP50-205ENST00000419387 PAPPA-AS1Q5QFB9 102 aa5.73□□□□□ -1.49
NUP50-205ENST00000419387 C9orf129Q5T035 196 aaKnown RBP5.73□□□□□ -1.49
NUP50-205ENST00000419387 BAGE3Q86Y29 109 aa5.73□□□□□ -1.49
NUP50-205ENST00000419387 TOMM7Q9P0U1 55 aa5.73□□□□□ -1.49
NUP50-205ENST00000419387 TINCRA0A1B0GVN0 87 aa5.72□□□□□ -1.49
NUP50-205ENST00000419387 H0Y9J4 135 aa5.72□□□□□ -1.49
NUP50-205ENST00000419387 CKS1BP61024 79 aa5.72□□□□□ -1.49
NUP50-205ENST00000419387 HERVK_113P63121 156 aa5.72□□□□□ -1.49
NUP50-205ENST00000419387 UBE2BP63146 152 aa5.72□□□□□ -1.49
NUP50-205ENST00000419387 COA6Q5JTJ3 125 aaKnown RBP5.72□□□□□ -1.49
NUP50-205ENST00000419387 Q8IZM0 81 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms