RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 HIST1H2BMQ99879 126 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 TOMM7Q9P0U1 55 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 LINC00474Q9P2X8 69 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 A0A087WYN8 130 aa11.21□□□□□ -0.61
EPCAM-203ENST00000419334 TRAV12-1A0A0B4J245 112 aa11.21□□□□□ -0.61
EPCAM-203ENST00000419334 NUPR1O60356 82 aa11.21□□□□□ -0.61
EPCAM-203ENST00000419334 LINC00528Q8N1L1 170 aa11.21□□□□□ -0.61
EPCAM-203ENST00000419334 DPH3Q96FX2 82 aa11.21□□□□□ -0.61
EPCAM-203ENST00000419334 C6orf48Q9UBA6 75 aa11.21□□□□□ -0.61
EPCAM-203ENST00000419334 TRBV30A0A0K0K1B3 111 aa11.2□□□□□ -0.62
EPCAM-203ENST00000419334 H3BRM9 83 aa11.2□□□□□ -0.62
EPCAM-203ENST00000419334 PTTG1IPP53801 180 aa11.2□□□□□ -0.62
EPCAM-203ENST00000419334 MAJINQ3KP22 176 aa11.2□□□□□ -0.62
EPCAM-203ENST00000419334 C6orf226Q5I0X4 101 aa11.2□□□□□ -0.62
EPCAM-203ENST00000419334 C2orf82Q6UX34 121 aa11.2□□□□□ -0.62
EPCAM-203ENST00000419334 LEPROTL1O95214 131 aa11.19□□□□□ -0.62
EPCAM-203ENST00000419334 TLX1NBP0CAT3 122 aa11.19□□□□□ -0.62
EPCAM-203ENST00000419334 ZNF22P17026 224 aaPredicted RBP11.19□□□□□ -0.62
EPCAM-203ENST00000419334 PLAC8Q9NZF1 115 aa11.19□□□□□ -0.62
EPCAM-203ENST00000419334 CHTOPQ9Y3Y2 248 aaKnown RBP11.19□□□□□ -0.62
EPCAM-203ENST00000419334 SPINK8P0C7L1 97 aa11.18□□□□□ -0.62
EPCAM-203ENST00000419334 CXCL5P42830 114 aa11.18□□□□□ -0.62
EPCAM-203ENST00000419334 CKS1BP61024 79 aa11.18□□□□□ -0.62
EPCAM-203ENST00000419334 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
EPCAM-203ENST00000419334 C11orf86A6NJI1 115 aa11.17□□□□□ -0.62
EPCAM-203ENST00000419334 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
EPCAM-203ENST00000419334 STPG4Q8N801 248 aa11.17□□□□□ -0.62
EPCAM-203ENST00000419334 COX7B2Q8TF08 81 aa11.17□□□□□ -0.62
EPCAM-203ENST00000419334 F8VRH5 84 aa11.16□□□□□ -0.62
EPCAM-203ENST00000419334 HSPB8Q9UJY1 196 aa11.16□□□□□ -0.62
EPCAM-203ENST00000419334 ABCA13Q86UQ4 5058 aa11.15□□□□□ -0.62
EPCAM-203ENST00000419334 IGLV5-39A0A0G2JS06 123 aa11.15□□□□□ -0.62
EPCAM-203ENST00000419334 PLA2G1BP04054 148 aaKnown RBP11.15□□□□□ -0.62
EPCAM-203ENST00000419334 FAT1Q14517 4588 aa11.15□□□□□ -0.62
EPCAM-203ENST00000419334 TMEM170BQ5T4T1 132 aa11.14□□□□□ -0.63
EPCAM-203ENST00000419334 FABP4P15090 132 aa11.13□□□□□ -0.63
EPCAM-203ENST00000419334 Q6ZRP5 223 aa11.13□□□□□ -0.63
EPCAM-203ENST00000419334 NDUFC2-KCTD14E9PQ53 114 aa11.12□□□□□ -0.63
EPCAM-203ENST00000419334 ODF1Q14990 250 aa11.12□□□□□ -0.63
EPCAM-203ENST00000419334 C9orf116Q5BN46 136 aaPredicted RBP11.12□□□□□ -0.63
EPCAM-203ENST00000419334 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
EPCAM-203ENST00000419334 H0Y8G0 127 aa11.1□□□□□ -0.63
EPCAM-203ENST00000419334 KRTAP10-4P60372 401 aaPredicted RBP11.1□□□□□ -0.63
EPCAM-203ENST00000419334 TMEM223A0PJW6 202 aa11.09□□□□□ -0.63
EPCAM-203ENST00000419334 RPL37AP61513 92 aaKnown RBP11.09□□□□□ -0.63
EPCAM-203ENST00000419334 GAGE2EQ4V326 116 aa11.09□□□□□ -0.63
EPCAM-203ENST00000419334 GAGE2DQ9UEU5 116 aa11.09□□□□□ -0.63
EPCAM-203ENST00000419334 VPS13BQ7Z7G8 4022 aa11.09□□□□□ -0.63
EPCAM-203ENST00000419334 A0A1W2PNN7 141 aa11.08□□□□□ -0.64
EPCAM-203ENST00000419334 C7orf33Q8WU49 177 aa11.08□□□□□ -0.64
EPCAM-203ENST00000419334 MAP1LC3CQ9BXW4 147 aa11.08□□□□□ -0.64
EPCAM-203ENST00000419334 INAFM2P0DMQ5 153 aa11.07□□□□□ -0.64
EPCAM-203ENST00000419334 SRRM2Q9UQ35 2752 aaKnown RBP11.06□□□□□ -0.64
EPCAM-203ENST00000419334 PLNP26678 52 aa11.06□□□□□ -0.64
EPCAM-203ENST00000419334 SFTA2Q6UW10 78 aa11.06□□□□□ -0.64
EPCAM-203ENST00000419334 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
EPCAM-203ENST00000419334 FAM168BA1KXE4 195 aa11.03□□□□□ -0.64
EPCAM-203ENST00000419334 DPM2O94777 84 aa11.03□□□□□ -0.64
EPCAM-203ENST00000419334 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.65
EPCAM-203ENST00000419334 IGKCP01834 107 aa11.02□□□□□ -0.65
EPCAM-203ENST00000419334 ZNF625Q96I27 306 aaPredicted RBP11.02□□□□□ -0.65
EPCAM-203ENST00000419334 PMCHL2Q9BQD1 86 aa11.01□□□□□ -0.65
EPCAM-203ENST00000419334 XAGE1AQ9HD64 81 aa11.01□□□□□ -0.65
EPCAM-203ENST00000419334 FAM19A5Q7Z5A7 132 aaPredicted RBP11□□□□□ -0.65
EPCAM-203ENST00000419334 KRTAP7-1Q8IUC3 87 aa11□□□□□ -0.65
EPCAM-203ENST00000419334 COX17Q14061 63 aa10.99□□□□□ -0.65
EPCAM-203ENST00000419334 PHF5AQ7RTV0 110 aaKnown RBP10.99□□□□□ -0.65
EPCAM-203ENST00000419334 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
EPCAM-203ENST00000419334 PRR3P79522 188 aaKnown RBP10.98□□□□□ -0.65
EPCAM-203ENST00000419334 LINC01545Q5VT33 79 aa10.98□□□□□ -0.65
EPCAM-203ENST00000419334 PET117Q6UWS5 81 aa10.98□□□□□ -0.65
EPCAM-203ENST00000419334 FLG2Q5D862 2391 aaPredicted RBP10.97□□□□□ -0.65
EPCAM-203ENST00000419334 M0QXV9 152 aa10.97□□□□□ -0.65
EPCAM-203ENST00000419334 LEPROTO15243 131 aa10.97□□□□□ -0.65
EPCAM-203ENST00000419334 C3orf79P0CE67 100 aa10.97□□□□□ -0.65
EPCAM-203ENST00000419334 PFN2P35080 140 aa10.97□□□□□ -0.65
EPCAM-203ENST00000419334 HERVK_113P61574 105 aa10.97□□□□□ -0.65
EPCAM-203ENST00000419334 PLEKHB2Q96CS7 222 aa10.96□□□□□ -0.65
EPCAM-203ENST00000419334 HNRNPA3P51991 378 aaKnown RBP10.95□□□□□ -0.66
EPCAM-203ENST00000419334 SERTAD4-AS1Q5TG53 156 aa10.95□□□□□ -0.66
EPCAM-203ENST00000419334 HERV-K104P63124 156 aa10.94□□□□□ -0.66
EPCAM-203ENST00000419334 NDUFA12Q9UI09 145 aa10.94□□□□□ -0.66
EPCAM-203ENST00000419334 PLA2G2DQ9UNK4 145 aa10.94□□□□□ -0.66
EPCAM-203ENST00000419334 MYMXA0A1B0GTQ4 84 aa10.93□□□□□ -0.66
EPCAM-203ENST00000419334 TSPEAR-AS2P59090 65 aa10.93□□□□□ -0.66
EPCAM-203ENST00000419334 KRTDAPP60985 99 aa10.93□□□□□ -0.66
EPCAM-203ENST00000419334 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
EPCAM-203ENST00000419334 J3QQQ9 107 aa10.92□□□□□ -0.66
EPCAM-203ENST00000419334 SND1-IT1Q9HBX3 110 aa10.92□□□□□ -0.66
EPCAM-203ENST00000419334 TP73-AS1Q9UF72 201 aa10.92□□□□□ -0.66
EPCAM-203ENST00000419334 C22orf24Q9Y442 160 aa10.92□□□□□ -0.66
EPCAM-203ENST00000419334 E9PLD3 99 aa10.91□□□□□ -0.66
EPCAM-203ENST00000419334 HIST3H2BBQ8N257 126 aa10.91□□□□□ -0.66
EPCAM-203ENST00000419334 IGLV5-37A0A075B6J1 123 aa10.9□□□□□ -0.66
EPCAM-203ENST00000419334 LINC00587B1AMM8 73 aa10.9□□□□□ -0.66
EPCAM-203ENST00000419334 S100A6P06703 90 aa10.9□□□□□ -0.66
EPCAM-203ENST00000419334 NMUP48645 174 aa10.9□□□□□ -0.66
EPCAM-203ENST00000419334 LINC00158P58513 81 aa10.9□□□□□ -0.66
EPCAM-203ENST00000419334 KRTAP11-1Q8IUC1 163 aa10.9□□□□□ -0.66
EPCAM-203ENST00000419334 C20orf202A1L168 122 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms