RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 S100A1P23297 94 aa4.41□□□□□ -1.7
NCL-203ENST00000417652 RNF151Q2KHN1 245 aa4.41□□□□□ -1.7
NCL-203ENST00000417652 PDZD11Q5EBL8 140 aa4.41□□□□□ -1.7
NCL-203ENST00000417652 FAM19A3Q7Z5A8 133 aa4.41□□□□□ -1.7
NCL-203ENST00000417652 FAM19A2Q8N3H0 131 aa4.41□□□□□ -1.7
NCL-203ENST00000417652 STPG4Q8N801 248 aa4.41□□□□□ -1.7
NCL-203ENST00000417652 IFI27L1Q96BM0 104 aa4.41□□□□□ -1.7
NCL-203ENST00000417652 A0A087WYN8 130 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 A0A096LNI7 61 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 TMEM238LA0A1B0GVL6 79 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 SERF1AO75920 110 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 LEPROTL1O95214 131 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 SPINK8P0C7L1 97 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 INAFM2P0DMQ5 153 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 FABP4P15090 132 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 TMEM170BQ5T4T1 132 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 C2orf82Q6UX34 121 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 Q8IZM0 81 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 SPACA4Q8TDM5 124 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 C7orf33Q8WU49 177 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 MRPL35Q9NZE8 188 aaKnown RBP4.4□□□□□ -1.71
NCL-203ENST00000417652 HSPB8Q9UJY1 196 aa4.4□□□□□ -1.71
NCL-203ENST00000417652 CHTOPQ9Y3Y2 248 aaKnown RBP4.4□□□□□ -1.71
NCL-203ENST00000417652 A0A096LNJ9 63 aa4.39□□□□□ -1.71
NCL-203ENST00000417652 TRBV30A0A0K0K1B3 111 aa4.39□□□□□ -1.71
NCL-203ENST00000417652 PANO1I0J062 215 aa4.39□□□□□ -1.71
NCL-203ENST00000417652 PTTG1IPP53801 180 aa4.39□□□□□ -1.71
NCL-203ENST00000417652 RPL37AP61513 92 aaKnown RBP4.39□□□□□ -1.71
NCL-203ENST00000417652 GAGE2EQ4V326 116 aa4.39□□□□□ -1.71
NCL-203ENST00000417652 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
NCL-203ENST00000417652 COX7B2Q8TF08 81 aa4.39□□□□□ -1.71
NCL-203ENST00000417652 GAGE2DQ9UEU5 116 aa4.39□□□□□ -1.71
NCL-203ENST00000417652 F8VRH5 84 aa4.38□□□□□ -1.71
NCL-203ENST00000417652 IGLC3P0DOY3 106 aa4.38□□□□□ -1.71
NCL-203ENST00000417652 CXCL5P42830 114 aa4.38□□□□□ -1.71
NCL-203ENST00000417652 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
NCL-203ENST00000417652 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
NCL-203ENST00000417652 C6orf48Q9UBA6 75 aa4.38□□□□□ -1.71
NCL-203ENST00000417652 SRRM2Q9UQ35 2752 aaKnown RBP4.37□□□□□ -1.71
NCL-203ENST00000417652 IGLV5-45A0A087WSX0 123 aa4.37□□□□□ -1.71
NCL-203ENST00000417652 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
NCL-203ENST00000417652 SMIM1B2RUZ4 78 aa4.37□□□□□ -1.71
NCL-203ENST00000417652 NDUFC2-KCTD14E9PQ53 114 aa4.37□□□□□ -1.71
NCL-203ENST00000417652 ZNF22P17026 224 aaPredicted RBP4.37□□□□□ -1.71
NCL-203ENST00000417652 CIRBPQ14011 172 aaKnown RBP4.37□□□□□ -1.71
NCL-203ENST00000417652 C9orf116Q5BN46 136 aaPredicted RBP4.37□□□□□ -1.71
NCL-203ENST00000417652 MAP1LC3CQ9BXW4 147 aa4.37□□□□□ -1.71
NCL-203ENST00000417652 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
NCL-203ENST00000417652 PLAC8Q9NZF1 115 aa4.37□□□□□ -1.71
NCL-203ENST00000417652 C11orf86A6NJI1 115 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 NUPR1O60356 82 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 EIF4EBP3O60516 100 aaPredicted RBP4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST1H2BKO60814 126 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 ATP6V1G1O75348 118 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST1H2BJP06899 126 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST1H2BOP23527 126 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST1H2BBP33778 126 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST1H2BDP58876 126 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST1H2BCP62807 126 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST2H2BEQ16778 126 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.36□□□□□ -1.71
NCL-203ENST00000417652 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 Q6ZRP5 223 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST1H2BHQ93079 126 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST1H2BNQ99877 126 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 HIST1H2BMQ99879 126 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 PCLOQ9Y6V0 5065 aa4.36□□□□□ -1.71
NCL-203ENST00000417652 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
NCL-203ENST00000417652 TLX1NBP0CAT3 122 aa4.35□□□□□ -1.71
NCL-203ENST00000417652 PFN2P35080 140 aa4.35□□□□□ -1.71
NCL-203ENST00000417652 FAM19A5Q7Z5A7 132 aaPredicted RBP4.35□□□□□ -1.71
NCL-203ENST00000417652 KRTAP17-1Q9BYP8 105 aa4.35□□□□□ -1.71
NCL-203ENST00000417652 HSPG2P98160 4391 aa4.35□□□□□ -1.71
NCL-203ENST00000417652 A0A1W2PNN7 141 aa4.34□□□□□ -1.71
NCL-203ENST00000417652 DPM2O94777 84 aa4.34□□□□□ -1.71
NCL-203ENST00000417652 PLNP26678 52 aa4.34□□□□□ -1.71
NCL-203ENST00000417652 HERVK_113P61574 105 aa4.34□□□□□ -1.71
NCL-203ENST00000417652 UBE2BP63146 152 aa4.34□□□□□ -1.71
NCL-203ENST00000417652 SFTA2Q6UW10 78 aa4.34□□□□□ -1.71
NCL-203ENST00000417652 ZNF625Q96I27 306 aaPredicted RBP4.34□□□□□ -1.71
NCL-203ENST00000417652 XAGE1AQ9HD64 81 aa4.34□□□□□ -1.71
NCL-203ENST00000417652 ABCA13Q86UQ4 5058 aa4.34□□□□□ -1.72
NCL-203ENST00000417652 IGLV5-39A0A0G2JS06 123 aa4.33□□□□□ -1.72
NCL-203ENST00000417652 TMEM223A0PJW6 202 aa4.33□□□□□ -1.72
NCL-203ENST00000417652 IGKCP01834 107 aa4.33□□□□□ -1.72
NCL-203ENST00000417652 LINC00158P58513 81 aa4.33□□□□□ -1.72
NCL-203ENST00000417652 LINC00310P59036 64 aa4.33□□□□□ -1.72
NCL-203ENST00000417652 ODF1Q14990 250 aa4.33□□□□□ -1.72
NCL-203ENST00000417652 PHF5AQ7RTV0 110 aaKnown RBP4.33□□□□□ -1.72
NCL-203ENST00000417652 PMCHL2Q9BQD1 86 aa4.33□□□□□ -1.72
NCL-203ENST00000417652 FLG2Q5D862 2391 aaPredicted RBP4.32□□□□□ -1.72
NCL-203ENST00000417652 FAM168BA1KXE4 195 aa4.32□□□□□ -1.72
NCL-203ENST00000417652 M0QXV9 152 aa4.32□□□□□ -1.72
NCL-203ENST00000417652 S100A6P06703 90 aa4.32□□□□□ -1.72
NCL-203ENST00000417652 KRTDAPP60985 99 aa4.32□□□□□ -1.72
NCL-203ENST00000417652 LBHQ53QV2 105 aaPredicted RBP4.32□□□□□ -1.72
NCL-203ENST00000417652 MEIG1Q5JSS6 88 aa4.32□□□□□ -1.72
NCL-203ENST00000417652 PLEKHB2Q96CS7 222 aa4.32□□□□□ -1.72
NCL-203ENST00000417652 ERG28Q9UKR5 140 aa4.32□□□□□ -1.72
NCL-203ENST00000417652 DNAH8Q96JB1 4490 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms