RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CDKN2A-AS1Q9UH64 79 aa8.79□□□□□ -1
RPS28-201ENST00000417088 K7EMI3 77 aa8.78□□□□□ -1
RPS28-201ENST00000417088 F8VRH5 84 aa8.77□□□□□ -1.01
RPS28-201ENST00000417088 MT-ND4LP03901 98 aa8.77□□□□□ -1.01
RPS28-201ENST00000417088 HERVK_113P63121 156 aa8.77□□□□□ -1.01
RPS28-201ENST00000417088 SEC11AP67812 179 aa8.77□□□□□ -1.01
RPS28-201ENST00000417088 PNRC1Q12796 327 aaPredicted RBP8.77□□□□□ -1.01
RPS28-201ENST00000417088 ANAPC16Q96DE5 110 aa8.77□□□□□ -1.01
RPS28-201ENST00000417088 NXT2Q9NPJ8 142 aaKnown RBP8.77□□□□□ -1.01
RPS28-201ENST00000417088 TP73-AS1Q9UF72 201 aa8.77□□□□□ -1.01
RPS28-201ENST00000417088 TSPAN13O95857 204 aa8.76□□□□□ -1.01
RPS28-201ENST00000417088 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
RPS28-201ENST00000417088 BCE1O60756 84 aa8.75□□□□□ -1.01
RPS28-201ENST00000417088 RPL28P46779 137 aaKnown RBP8.75□□□□□ -1.01
RPS28-201ENST00000417088 PAPPA-AS1Q5QFB9 102 aa8.75□□□□□ -1.01
RPS28-201ENST00000417088 TIMM17AQ99595 171 aa8.75□□□□□ -1.01
RPS28-201ENST00000417088 GEMIN7Q9H840 131 aaKnown RBP8.75□□□□□ -1.01
RPS28-201ENST00000417088 A0A087X002 238 aa8.74□□□□□ -1.01
RPS28-201ENST00000417088 TOMM6Q96B49 74 aa8.74□□□□□ -1.01
RPS28-201ENST00000417088 SMIM1B2RUZ4 78 aa8.73□□□□□ -1.01
RPS28-201ENST00000417088 G0S2P27469 103 aa8.73□□□□□ -1.01
RPS28-201ENST00000417088 CXCL5P42830 114 aa8.73□□□□□ -1.01
RPS28-201ENST00000417088 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
RPS28-201ENST00000417088 RPL37AP8A6NKH3 93 aa8.71□□□□□ -1.02
RPS28-201ENST00000417088 CRYGAP11844 174 aa8.71□□□□□ -1.02
RPS28-201ENST00000417088 KIAA1644Q3SXP7 199 aa8.71□□□□□ -1.02
RPS28-201ENST00000417088 ERASQ7Z444 233 aa8.71□□□□□ -1.02
RPS28-201ENST00000417088 TYMSOSQ8TAI1 123 aa8.71□□□□□ -1.02
RPS28-201ENST00000417088 COX7B2Q8TF08 81 aa8.71□□□□□ -1.02
RPS28-201ENST00000417088 ADCYAP1P18509 176 aa8.7□□□□□ -1.02
RPS28-201ENST00000417088 PDZD11Q5EBL8 140 aa8.7□□□□□ -1.02
RPS28-201ENST00000417088 SCGB3A1Q96QR1 104 aa8.7□□□□□ -1.02
RPS28-201ENST00000417088 ANAPC11Q9NYG5 84 aa8.7□□□□□ -1.02
RPS28-201ENST00000417088 IGLV5-45A0A087WSX0 123 aa8.69□□□□□ -1.02
RPS28-201ENST00000417088 TINCRA0A1B0GVN0 87 aa8.69□□□□□ -1.02
RPS28-201ENST00000417088 GAGE10A6NGK3 116 aa8.69□□□□□ -1.02
RPS28-201ENST00000417088 IGLV5-37A0A075B6J1 123 aa8.68□□□□□ -1.02
RPS28-201ENST00000417088 KRTAP13-1Q8IUC0 172 aa8.68□□□□□ -1.02
RPS28-201ENST00000417088 RAB5BP61020 215 aa8.67□□□□□ -1.02
RPS28-201ENST00000417088 KRTAP13-2Q52LG2 175 aa8.67□□□□□ -1.02
RPS28-201ENST00000417088 FAT4Q6V0I7 4981 aa8.66□□□□□ -1.02
RPS28-201ENST00000417088 A0A0U1RQV1 116 aa8.66□□□□□ -1.02
RPS28-201ENST00000417088 CST9LQ9H4G1 147 aa8.66□□□□□ -1.02
RPS28-201ENST00000417088 LINC01546A6NGU7 62 aa8.65□□□□□ -1.02
RPS28-201ENST00000417088 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
RPS28-201ENST00000417088 RAB14P61106 215 aa8.65□□□□□ -1.02
RPS28-201ENST00000417088 LINC01549A6NIU2 74 aa8.64□□□□□ -1.03
RPS28-201ENST00000417088 UBE2AP49459 152 aa8.64□□□□□ -1.03
RPS28-201ENST00000417088 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
RPS28-201ENST00000417088 SCO1O75880 301 aa8.63□□□□□ -1.03
RPS28-201ENST00000417088 IGKV2-28A0A075B6P5 120 aa8.62□□□□□ -1.03
RPS28-201ENST00000417088 TRAV9-1A0A075B6T8 112 aa8.62□□□□□ -1.03
RPS28-201ENST00000417088 IGKV2D-28P01615 120 aa8.62□□□□□ -1.03
RPS28-201ENST00000417088 PMVKQ15126 192 aa8.62□□□□□ -1.03
RPS28-201ENST00000417088 FAM229BQ4G0N7 80 aa8.62□□□□□ -1.03
RPS28-201ENST00000417088 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
RPS28-201ENST00000417088 ATP5LO75964 103 aa8.61□□□□□ -1.03
RPS28-201ENST00000417088 RETNLBQ9BQ08 111 aa8.61□□□□□ -1.03
RPS28-201ENST00000417088 PFN2P35080 140 aa8.6□□□□□ -1.03
RPS28-201ENST00000417088 LINC00304Q8N9R0 145 aa8.6□□□□□ -1.03
RPS28-201ENST00000417088 GNB1LQ9BYB4 327 aa8.6□□□□□ -1.03
RPS28-201ENST00000417088 H3BRM9 83 aa8.59□□□□□ -1.03
RPS28-201ENST00000417088 VPREB1P12018 145 aa8.59□□□□□ -1.03
RPS28-201ENST00000417088 PRLHP81277 87 aa8.59□□□□□ -1.03
RPS28-201ENST00000417088 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
RPS28-201ENST00000417088 IGLV5-39A0A0G2JS06 123 aa8.58□□□□□ -1.04
RPS28-201ENST00000417088 CLLU1Q5K131 121 aa8.58□□□□□ -1.04
RPS28-201ENST00000417088 FA2HQ7L5A8 372 aa8.58□□□□□ -1.04
RPS28-201ENST00000417088 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
RPS28-201ENST00000417088 MUC17Q685J3 4493 aa8.58□□□□□ -1.04
RPS28-201ENST00000417088 IGKV2D-26A0A0A0MRZ7 120 aa8.57□□□□□ -1.04
RPS28-201ENST00000417088 TMEM218A2RU14 115 aa8.57□□□□□ -1.04
RPS28-201ENST00000417088 TMEM238C9JI98 176 aa8.57□□□□□ -1.04
RPS28-201ENST00000417088 IGLC3P0DOY3 106 aa8.57□□□□□ -1.04
RPS28-201ENST00000417088 TMEM126AQ9H061 195 aa8.57□□□□□ -1.04
RPS28-201ENST00000417088 SND1-IT1Q9HBX3 110 aa8.57□□□□□ -1.04
RPS28-201ENST00000417088 ZNF22P17026 224 aaPredicted RBP8.56□□□□□ -1.04
RPS28-201ENST00000417088 S100PP25815 95 aa8.56□□□□□ -1.04
RPS28-201ENST00000417088 FAM19A1Q7Z5A9 133 aa8.56□□□□□ -1.04
RPS28-201ENST00000417088 SMCO4Q9NRQ5 59 aa8.56□□□□□ -1.04
RPS28-201ENST00000417088 ERG28Q9UKR5 140 aa8.56□□□□□ -1.04
RPS28-201ENST00000417088 M0R378 163 aa8.55□□□□□ -1.04
RPS28-201ENST00000417088 TPRXLQ17RH7 258 aa8.55□□□□□ -1.04
RPS28-201ENST00000417088 UQCC3Q6UW78 93 aa8.55□□□□□ -1.04
RPS28-201ENST00000417088 Q8NDZ9 215 aa8.55□□□□□ -1.04
RPS28-201ENST00000417088 IGLV7-46A0A075B6I9 117 aa8.54□□□□□ -1.04
RPS28-201ENST00000417088 A0A096LNJ9 63 aa8.54□□□□□ -1.04
RPS28-201ENST00000417088 CTAG1AP78358 180 aa8.54□□□□□ -1.04
RPS28-201ENST00000417088 RPL24P83731 157 aaKnown RBP8.54□□□□□ -1.04
RPS28-201ENST00000417088 FABP9Q0Z7S8 132 aa8.54□□□□□ -1.04
RPS28-201ENST00000417088 COX19Q49B96 90 aa8.54□□□□□ -1.04
RPS28-201ENST00000417088 PLEKHB2Q96CS7 222 aa8.54□□□□□ -1.04
RPS28-201ENST00000417088 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
RPS28-201ENST00000417088 NDUFA6P56556 154 aa8.53□□□□□ -1.04
RPS28-201ENST00000417088 COX17Q14061 63 aa8.53□□□□□ -1.04
RPS28-201ENST00000417088 ZNF625Q96I27 306 aaPredicted RBP8.53□□□□□ -1.04
RPS28-201ENST00000417088 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.05
RPS28-201ENST00000417088 URB1-AS1Q96HZ7 61 aa8.52□□□□□ -1.05
RPS28-201ENST00000417088 SEC11CQ9BY50 192 aa8.52□□□□□ -1.05
RPS28-201ENST00000417088 CBLN2Q8IUK8 224 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms