RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 COMMD7Q86VX2 200 aa15.3■□□□□ 0.04
HLA-C-204ENST00000415537 CDKN2A-AS1Q9UH64 79 aa15.3■□□□□ 0.04
HLA-C-204ENST00000415537 LINC01549A6NIU2 74 aa15.29■□□□□ 0.04
HLA-C-204ENST00000415537 M0QXV9 152 aa15.29■□□□□ 0.04
HLA-C-204ENST00000415537 IGLV7-43P04211 117 aa15.29■□□□□ 0.04
HLA-C-204ENST00000415537 UBE2BP63146 152 aa15.28■□□□□ 0.04
HLA-C-204ENST00000415537 C9orf129Q5T035 196 aaKnown RBP15.27■□□□□ 0.04
HLA-C-204ENST00000415537 ODF1Q14990 250 aa15.26■□□□□ 0.03
HLA-C-204ENST00000415537 DIRC1Q969H9 104 aa15.26■□□□□ 0.03
HLA-C-204ENST00000415537 UBR4Q5T4S7 5183 aa15.25■□□□□ 0.03
HLA-C-204ENST00000415537 KRTAP7-1Q8IUC3 87 aa15.25■□□□□ 0.03
HLA-C-204ENST00000415537 LINC00469Q8N7U9 141 aa15.25■□□□□ 0.03
HLA-C-204ENST00000415537 LINC01546A6NGU7 62 aa15.24■□□□□ 0.03
HLA-C-204ENST00000415537 FABP9Q0Z7S8 132 aa15.24■□□□□ 0.03
HLA-C-204ENST00000415537 FA2HQ7L5A8 372 aa15.24■□□□□ 0.03
HLA-C-204ENST00000415537 KRTAP11-1Q8IUC1 163 aa15.24■□□□□ 0.03
HLA-C-204ENST00000415537 MRPL18Q9H0U6 180 aaKnown RBP15.24■□□□□ 0.03
HLA-C-204ENST00000415537 RPS10P5Q9NQ39 176 aa15.24■□□□□ 0.03
HLA-C-204ENST00000415537 SMCO4Q9NRQ5 59 aa15.24■□□□□ 0.03
HLA-C-204ENST00000415537 F8VRH5 84 aa15.23■□□□□ 0.03
HLA-C-204ENST00000415537 RHEBQ15382 184 aa15.23■□□□□ 0.03
HLA-C-204ENST00000415537 TINCRA0A1B0GVN0 87 aa15.22■□□□□ 0.03
HLA-C-204ENST00000415537 CXCL5P42830 114 aa15.22■□□□□ 0.03
HLA-C-204ENST00000415537 C10orf91Q5T1B1 145 aa15.21■□□□□ 0.03
HLA-C-204ENST00000415537 SMIM1B2RUZ4 78 aa15.19■□□□□ 0.02
HLA-C-204ENST00000415537 PDZD11Q5EBL8 140 aa15.19■□□□□ 0.02
HLA-C-204ENST00000415537 CST9LQ9H4G1 147 aa15.19■□□□□ 0.02
HLA-C-204ENST00000415537 CARHSP1Q9Y2V2 147 aaKnown RBP15.19■□□□□ 0.02
HLA-C-204ENST00000415537 H0Y9J4 135 aa15.18■□□□□ 0.02
HLA-C-204ENST00000415537 XAGE1AQ9HD64 81 aa15.18■□□□□ 0.02
HLA-C-204ENST00000415537 PMVKQ15126 192 aa15.17■□□□□ 0.02
HLA-C-204ENST00000415537 COX7B2Q8TF08 81 aa15.17■□□□□ 0.02
HLA-C-204ENST00000415537 C22orf24Q9Y442 160 aa15.16■□□□□ 0.02
HLA-C-204ENST00000415537 IGLV5-45A0A087WSX0 123 aa15.15■□□□□ 0.02
HLA-C-204ENST00000415537 LBHQ53QV2 105 aaPredicted RBP15.14■□□□□ 0.01
HLA-C-204ENST00000415537 SPINK8P0C7L1 97 aa15.13■□□□□ 0.01
HLA-C-204ENST00000415537 TRAPPC1Q9Y5R8 145 aa15.13■□□□□ 0.01
HLA-C-204ENST00000415537 PRR26Q8N8Z3 221 aa15.12■□□□□ 0.01
HLA-C-204ENST00000415537 H3BRM9 83 aa15.11■□□□□ 0.01
HLA-C-204ENST00000415537 NUPR1O60356 82 aa15.1■□□□□ 0.01
HLA-C-204ENST00000415537 NDUFA6P56556 154 aa15.1■□□□□ 0.01
HLA-C-204ENST00000415537 LINC00614P0C842 121 aa15.09■□□□□ 0.01
HLA-C-204ENST00000415537 MRPL55Q7Z7F7 128 aaKnown RBP15.08■□□□□ 0
HLA-C-204ENST00000415537 TP73-AS1Q9UF72 201 aa15.08■□□□□ 0
HLA-C-204ENST00000415537 APOC3P02656 99 aa15.07■□□□□ 0
HLA-C-204ENST00000415537 RAB5BP61020 215 aa15.07■□□□□ 0
HLA-C-204ENST00000415537 C18orf32Q8TCD1 76 aa15.07■□□□□ 0
HLA-C-204ENST00000415537 IGLV1-50A0A075B6I6 118 aa15.06■□□□□ 0
HLA-C-204ENST00000415537 ZNF861PO60384 105 aa15.06■□□□□ 0
HLA-C-204ENST00000415537 HBDP02042 147 aa15.05■□□□□ -0
HLA-C-204ENST00000415537 IGLC3P0DOY3 106 aa15.05■□□□□ -0
HLA-C-204ENST00000415537 NDUFA5Q16718 116 aa15.05■□□□□ -0
HLA-C-204ENST00000415537 A0A096LNJ9 63 aa15.04■□□□□ -0
HLA-C-204ENST00000415537 ATP5LO75964 103 aa15.04■□□□□ -0
HLA-C-204ENST00000415537 SNAPINO95295 136 aa15.04■□□□□ -0
HLA-C-204ENST00000415537 KRTAP1-4P0C5Y4 121 aa15.03■□□□□ -0
HLA-C-204ENST00000415537 URB1-AS1Q96HZ7 61 aa15.03■□□□□ -0
HLA-C-204ENST00000415537 LRP2P98164 4655 aa15.02■□□□□ -0
HLA-C-204ENST00000415537 SVBPQ8N300 66 aa15.02■□□□□ -0
HLA-C-204ENST00000415537 PMCHL1Q16048 86 aa15.01□□□□□ -0.01
HLA-C-204ENST00000415537 LINC00167Q96N53 147 aa15□□□□□ -0.01
HLA-C-204ENST00000415537 RPL37AP8A6NKH3 93 aa14.99□□□□□ -0.01
HLA-C-204ENST00000415537 ZNF22P17026 224 aaPredicted RBP14.99□□□□□ -0.01
HLA-C-204ENST00000415537 RPL13AP40429 203 aaKnown RBP14.99□□□□□ -0.01
HLA-C-204ENST00000415537 NKAPP1Q8N9T2 125 aa14.99□□□□□ -0.01
HLA-C-204ENST00000415537 IGLV5-39A0A0G2JS06 123 aa14.98□□□□□ -0.01
HLA-C-204ENST00000415537 BCE1O60756 84 aa14.97□□□□□ -0.01
HLA-C-204ENST00000415537 PFN2P35080 140 aa14.97□□□□□ -0.01
HLA-C-204ENST00000415537 RPL28P46779 137 aaKnown RBP14.97□□□□□ -0.01
HLA-C-204ENST00000415537 BAGE3Q86Y29 109 aa14.97□□□□□ -0.01
HLA-C-204ENST00000415537 GAGE10A6NGK3 116 aa14.96□□□□□ -0.01
HLA-C-204ENST00000415537 IGLV5-37A0A075B6J1 123 aa14.94□□□□□ -0.02
HLA-C-204ENST00000415537 TMEM170BQ5T4T1 132 aa14.94□□□□□ -0.02
HLA-C-204ENST00000415537 ERG28Q9UKR5 140 aa14.92□□□□□ -0.02
HLA-C-204ENST00000415537 C11orf86A6NJI1 115 aa14.91□□□□□ -0.02
HLA-C-204ENST00000415537 COX17Q14061 63 aa14.91□□□□□ -0.02
HLA-C-204ENST00000415537 SFTA2Q6UW10 78 aa14.9□□□□□ -0.02
HLA-C-204ENST00000415537 ZNF625Q96I27 306 aaPredicted RBP14.89□□□□□ -0.03
HLA-C-204ENST00000415537 CHTOPQ9Y3Y2 248 aaKnown RBP14.89□□□□□ -0.03
HLA-C-204ENST00000415537 CHCHD1Q96BP2 118 aaKnown RBP14.88□□□□□ -0.03
HLA-C-204ENST00000415537 SND1-IT1Q9HBX3 110 aa14.88□□□□□ -0.03
HLA-C-204ENST00000415537 IGKV2-28A0A075B6P5 120 aa14.87□□□□□ -0.03
HLA-C-204ENST00000415537 IGKV2D-28P01615 120 aa14.87□□□□□ -0.03
HLA-C-204ENST00000415537 UBE2AP49459 152 aa14.87□□□□□ -0.03
HLA-C-204ENST00000415537 RPL24P83731 157 aaKnown RBP14.86□□□□□ -0.03
HLA-C-204ENST00000415537 SCO1O75880 301 aa14.85□□□□□ -0.03
HLA-C-204ENST00000415537 YPEL4Q96NS1 127 aa14.85□□□□□ -0.03
HLA-C-204ENST00000415537 IFI27L1Q96BM0 104 aa14.84□□□□□ -0.03
HLA-C-204ENST00000415537 VPREB1P12018 145 aa14.83□□□□□ -0.04
HLA-C-204ENST00000415537 TRAV12-1A0A0B4J245 112 aa14.82□□□□□ -0.04
HLA-C-204ENST00000415537 CRYGAP11844 174 aa14.82□□□□□ -0.04
HLA-C-204ENST00000415537 RNF213Q63HN8 5207 aa14.8□□□□□ -0.04
HLA-C-204ENST00000415537 LINC00158P58513 81 aa14.8□□□□□ -0.04
HLA-C-204ENST00000415537 A0A087X002 238 aa14.79□□□□□ -0.04
HLA-C-204ENST00000415537 TMEM223A0PJW6 202 aa14.79□□□□□ -0.04
HLA-C-204ENST00000415537 KRTAP13-1Q8IUC0 172 aa14.79□□□□□ -0.04
HLA-C-204ENST00000415537 TYMSOSQ8TAI1 123 aa14.79□□□□□ -0.04
HLA-C-204ENST00000415537 HSBP1O75506 76 aa14.78□□□□□ -0.04
HLA-C-204ENST00000415537 PRR4Q16378 134 aa14.78□□□□□ -0.04
HLA-C-204ENST00000415537 LPAP08519 4548 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms