RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 C6orf48Q9UBA6 75 aa15.99■□□□□ 0.15
CPNE1-207ENST00000414664 C2orf82Q6UX34 121 aa15.97■□□□□ 0.15
CPNE1-207ENST00000414664 C7orf33Q8WU49 177 aa15.97■□□□□ 0.15
CPNE1-207ENST00000414664 SRRM2Q9UQ35 2752 aaKnown RBP15.96■□□□□ 0.15
CPNE1-207ENST00000414664 HSBP1O75506 76 aa15.96■□□□□ 0.15
CPNE1-207ENST00000414664 TLX1NBP0CAT3 122 aa15.96■□□□□ 0.15
CPNE1-207ENST00000414664 H3BRM9 83 aa15.95■□□□□ 0.14
CPNE1-207ENST00000414664 IGLC3P0DOY3 106 aa15.95■□□□□ 0.14
CPNE1-207ENST00000414664 SMIM1B2RUZ4 78 aa15.94■□□□□ 0.14
CPNE1-207ENST00000414664 CXCL5P42830 114 aa15.93■□□□□ 0.14
CPNE1-207ENST00000414664 KRTAP10-4P60372 401 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-207ENST00000414664 Q6ZRP5 223 aa15.91■□□□□ 0.14
CPNE1-207ENST00000414664 COX7B2Q8TF08 81 aa15.91■□□□□ 0.14
CPNE1-207ENST00000414664 IFI27L1Q96BM0 104 aa15.91■□□□□ 0.14
CPNE1-207ENST00000414664 SCO1O75880 301 aa15.9■□□□□ 0.14
CPNE1-207ENST00000414664 NDUFC2-KCTD14E9PQ53 114 aa15.89■□□□□ 0.13
CPNE1-207ENST00000414664 F8VRH5 84 aa15.89■□□□□ 0.13
CPNE1-207ENST00000414664 SPINK8P0C7L1 97 aa15.89■□□□□ 0.13
CPNE1-207ENST00000414664 GAGE2EQ4V326 116 aa15.88■□□□□ 0.13
CPNE1-207ENST00000414664 C9orf116Q5BN46 136 aaPredicted RBP15.88■□□□□ 0.13
CPNE1-207ENST00000414664 FAM19A2Q8N3H0 131 aa15.88■□□□□ 0.13
CPNE1-207ENST00000414664 GAGE2DQ9UEU5 116 aa15.88■□□□□ 0.13
CPNE1-207ENST00000414664 SERF1AO75920 110 aa15.87■□□□□ 0.13
CPNE1-207ENST00000414664 CHTOPQ9Y3Y2 248 aaKnown RBP15.87■□□□□ 0.13
CPNE1-207ENST00000414664 TRAV12-1A0A0B4J245 112 aa15.86■□□□□ 0.13
CPNE1-207ENST00000414664 A0A1W2PNN7 141 aa15.86■□□□□ 0.13
CPNE1-207ENST00000414664 ZNF22P17026 224 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-207ENST00000414664 C11orf86A6NJI1 115 aa15.83■□□□□ 0.12
CPNE1-207ENST00000414664 LEPROTL1O95214 131 aa15.83■□□□□ 0.12
CPNE1-207ENST00000414664 LINC00310P59036 64 aa15.82■□□□□ 0.12
CPNE1-207ENST00000414664 TMEM170BQ5T4T1 132 aa15.82■□□□□ 0.12
CPNE1-207ENST00000414664 IGLV5-39A0A0G2JS06 123 aa15.81■□□□□ 0.12
CPNE1-207ENST00000414664 FLG2Q5D862 2391 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-207ENST00000414664 HSPB8Q9UJY1 196 aa15.79■□□□□ 0.12
CPNE1-207ENST00000414664 NUPR1O60356 82 aa15.77■□□□□ 0.12
CPNE1-207ENST00000414664 PRR3P79522 188 aaKnown RBP15.77■□□□□ 0.12
CPNE1-207ENST00000414664 FAM168BA1KXE4 195 aa15.76■□□□□ 0.11
CPNE1-207ENST00000414664 FAM19A5Q7Z5A7 132 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-207ENST00000414664 HIST1H2BKO60814 126 aa15.75■□□□□ 0.11
CPNE1-207ENST00000414664 HIST1H2BJP06899 126 aa15.75■□□□□ 0.11
CPNE1-207ENST00000414664 HIST1H2BOP23527 126 aa15.75■□□□□ 0.11
CPNE1-207ENST00000414664 HIST1H2BBP33778 126 aa15.75■□□□□ 0.11
CPNE1-207ENST00000414664 HIST1H2BDP58876 126 aa15.75■□□□□ 0.11
CPNE1-207ENST00000414664 HIST1H2BCP62807 126 aa15.75■□□□□ 0.11
CPNE1-207ENST00000414664 HIST2H2BEQ16778 126 aa15.75■□□□□ 0.11
CPNE1-207ENST00000414664 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-207ENST00000414664 C9orf129Q5T035 196 aaKnown RBP15.75■□□□□ 0.11
CPNE1-207ENST00000414664 PHF5AQ7RTV0 110 aaKnown RBP15.75■□□□□ 0.11
CPNE1-207ENST00000414664 HIST1H2BHQ93079 126 aa15.75■□□□□ 0.11
CPNE1-207ENST00000414664 HIST1H2BNQ99877 126 aa15.75■□□□□ 0.11
CPNE1-207ENST00000414664 HIST1H2BMQ99879 126 aa15.75■□□□□ 0.11
CPNE1-207ENST00000414664 H0Y8G0 127 aa15.74■□□□□ 0.11
CPNE1-207ENST00000414664 FABP4P15090 132 aa15.74■□□□□ 0.11
CPNE1-207ENST00000414664 HNRNPA3P51991 378 aaKnown RBP15.74■□□□□ 0.11
CPNE1-207ENST00000414664 SFTA2Q6UW10 78 aa15.73■□□□□ 0.11
CPNE1-207ENST00000414664 TMEM223A0PJW6 202 aa15.71■□□□□ 0.11
CPNE1-207ENST00000414664 KRTAP29-1A8MX34 341 aaPredicted RBP15.71■□□□□ 0.11
CPNE1-207ENST00000414664 S100A1P23297 94 aa15.71■□□□□ 0.11
CPNE1-207ENST00000414664 ODF1Q14990 250 aa15.71■□□□□ 0.11
CPNE1-207ENST00000414664 XAGE1AQ9HD64 81 aa15.71■□□□□ 0.11
CPNE1-207ENST00000414664 MYCBP2O75592 4640 aa15.71■□□□□ 0.1
CPNE1-207ENST00000414664 J3QL48 77 aa15.69■□□□□ 0.1
CPNE1-207ENST00000414664 M0QXV9 152 aa15.69■□□□□ 0.1
CPNE1-207ENST00000414664 OXTP01178 125 aa15.68■□□□□ 0.1
CPNE1-207ENST00000414664 KRTAP7-1Q8IUC3 87 aa15.68■□□□□ 0.1
CPNE1-207ENST00000414664 PLNP26678 52 aa15.67■□□□□ 0.1
CPNE1-207ENST00000414664 MAP1LC3CQ9BXW4 147 aa15.67■□□□□ 0.1
CPNE1-207ENST00000414664 PSORS1C2Q9UIG4 136 aa15.66■□□□□ 0.1
CPNE1-207ENST00000414664 PFN2P35080 140 aa15.65■□□□□ 0.1
CPNE1-207ENST00000414664 UBE2BP63146 152 aa15.65■□□□□ 0.1
CPNE1-207ENST00000414664 COX17Q14061 63 aa15.65■□□□□ 0.1
CPNE1-207ENST00000414664 ERG28Q9UKR5 140 aa15.65■□□□□ 0.1
CPNE1-207ENST00000414664 PKHD1L1Q86WI1 4243 aa15.64■□□□□ 0.09
CPNE1-207ENST00000414664 LBHQ53QV2 105 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-207ENST00000414664 SERTAD4-AS1Q5TG53 156 aa15.63■□□□□ 0.09
CPNE1-207ENST00000414664 ZNF625Q96I27 306 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-207ENST00000414664 DPM2O94777 84 aa15.62■□□□□ 0.09
CPNE1-207ENST00000414664 C1orf137Q5JT78 98 aa15.62■□□□□ 0.09
CPNE1-207ENST00000414664 SPINK6Q6UWN8 80 aa15.62■□□□□ 0.09
CPNE1-207ENST00000414664 C22orf24Q9Y442 160 aa15.62■□□□□ 0.09
CPNE1-207ENST00000414664 PLA2G2DQ9UNK4 145 aa15.61■□□□□ 0.09
CPNE1-207ENST00000414664 TP73-AS1Q9UF72 201 aa15.6■□□□□ 0.09
CPNE1-207ENST00000414664 ATP6V1G1O75348 118 aa15.59■□□□□ 0.09
CPNE1-207ENST00000414664 IGKCP01834 107 aa15.59■□□□□ 0.09
CPNE1-207ENST00000414664 DMBT1Q9UGM3 2413 aaPredicted RBP15.59■□□□□ 0.09
CPNE1-207ENST00000414664 HERVK_113P61574 105 aa15.58■□□□□ 0.08
CPNE1-207ENST00000414664 SRSF9Q13242 221 aaKnown RBP eCLIP15.58■□□□□ 0.08
CPNE1-207ENST00000414664 COA6Q5JTJ3 125 aaKnown RBP15.58■□□□□ 0.08
CPNE1-207ENST00000414664 PMCHL2Q9BQD1 86 aa15.57■□□□□ 0.08
CPNE1-207ENST00000414664 HERV-K104P63124 156 aa15.56■□□□□ 0.08
CPNE1-207ENST00000414664 MRPL55Q7Z7F7 128 aaKnown RBP15.56■□□□□ 0.08
CPNE1-207ENST00000414664 KRTAP11-1Q8IUC1 163 aa15.56■□□□□ 0.08
CPNE1-207ENST00000414664 SYS1-DBNDD2H3BUS1 97 aa15.55■□□□□ 0.08
CPNE1-207ENST00000414664 LINC00158P58513 81 aa15.55■□□□□ 0.08
CPNE1-207ENST00000414664 PLEKHB2Q96CS7 222 aa15.55■□□□□ 0.08
CPNE1-207ENST00000414664 SND1-IT1Q9HBX3 110 aa15.55■□□□□ 0.08
CPNE1-207ENST00000414664 LINC00587B1AMM8 73 aa15.54■□□□□ 0.08
CPNE1-207ENST00000414664 LEPROTO15243 131 aa15.54■□□□□ 0.08
CPNE1-207ENST00000414664 NKAPP1Q8N9T2 125 aa15.54■□□□□ 0.08
CPNE1-207ENST00000414664 NDUFA12Q9UI09 145 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms