RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 IGLV5-45A0A087WSX0 123 aa9.31□□□□□ -0.92
CHD1-202ENST00000414220 A0A096LNJ9 63 aa9.31□□□□□ -0.92
CHD1-202ENST00000414220 C6orf48Q9UBA6 75 aa9.31□□□□□ -0.92
CHD1-202ENST00000414220 COLCA2A8K830 154 aa9.3□□□□□ -0.92
CHD1-202ENST00000414220 IGLC3P0DOY3 106 aa9.3□□□□□ -0.92
CHD1-202ENST00000414220 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
CHD1-202ENST00000414220 C2orf82Q6UX34 121 aa9.3□□□□□ -0.92
CHD1-202ENST00000414220 FAT1Q14517 4588 aa9.29□□□□□ -0.92
CHD1-202ENST00000414220 COX7B2Q8TF08 81 aa9.29□□□□□ -0.92
CHD1-202ENST00000414220 IFI27L1Q96BM0 104 aa9.29□□□□□ -0.92
CHD1-202ENST00000414220 PCLOQ9Y6V0 5065 aa9.29□□□□□ -0.92
CHD1-202ENST00000414220 SMIM1B2RUZ4 78 aa9.28□□□□□ -0.92
CHD1-202ENST00000414220 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
CHD1-202ENST00000414220 F8VRH5 84 aa9.28□□□□□ -0.92
CHD1-202ENST00000414220 CHTOPQ9Y3Y2 248 aaKnown RBP9.28□□□□□ -0.92
CHD1-202ENST00000414220 SPINK8P0C7L1 97 aa9.27□□□□□ -0.93
CHD1-202ENST00000414220 GAGE2EQ4V326 116 aa9.27□□□□□ -0.93
CHD1-202ENST00000414220 GAGE2DQ9UEU5 116 aa9.27□□□□□ -0.93
CHD1-202ENST00000414220 TRAV12-1A0A0B4J245 112 aa9.26□□□□□ -0.93
CHD1-202ENST00000414220 C9orf116Q5BN46 136 aaPredicted RBP9.26□□□□□ -0.93
CHD1-202ENST00000414220 TMEM170BQ5T4T1 132 aa9.26□□□□□ -0.93
CHD1-202ENST00000414220 ABCA13Q86UQ4 5058 aa9.26□□□□□ -0.93
CHD1-202ENST00000414220 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
CHD1-202ENST00000414220 Q6ZRP5 223 aa9.25□□□□□ -0.93
CHD1-202ENST00000414220 FAM19A2Q8N3H0 131 aa9.25□□□□□ -0.93
CHD1-202ENST00000414220 HSPB8Q9UJY1 196 aa9.25□□□□□ -0.93
CHD1-202ENST00000414220 SERF1AO75920 110 aa9.24□□□□□ -0.93
CHD1-202ENST00000414220 ZNF22P17026 224 aaPredicted RBP9.24□□□□□ -0.93
CHD1-202ENST00000414220 SFTA2Q6UW10 78 aa9.24□□□□□ -0.93
CHD1-202ENST00000414220 A0A1W2PNN7 141 aa9.23□□□□□ -0.93
CHD1-202ENST00000414220 SCO1O75880 301 aa9.22□□□□□ -0.93
CHD1-202ENST00000414220 C11orf86A6NJI1 115 aa9.21□□□□□ -0.94
CHD1-202ENST00000414220 J3QL48 77 aa9.21□□□□□ -0.94
CHD1-202ENST00000414220 KRTAP10-4P60372 401 aaPredicted RBP9.21□□□□□ -0.94
CHD1-202ENST00000414220 IGLV5-39A0A0G2JS06 123 aa9.2□□□□□ -0.94
CHD1-202ENST00000414220 SRRM2Q9UQ35 2752 aaKnown RBP9.2□□□□□ -0.94
CHD1-202ENST00000414220 H0Y8G0 127 aa9.19□□□□□ -0.94
CHD1-202ENST00000414220 FABP4P15090 132 aa9.19□□□□□ -0.94
CHD1-202ENST00000414220 S100A1P23297 94 aa9.19□□□□□ -0.94
CHD1-202ENST00000414220 FAM19A5Q7Z5A7 132 aaPredicted RBP9.19□□□□□ -0.94
CHD1-202ENST00000414220 OXTP01178 125 aa9.18□□□□□ -0.94
CHD1-202ENST00000414220 PRR3P79522 188 aaKnown RBP9.18□□□□□ -0.94
CHD1-202ENST00000414220 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
CHD1-202ENST00000414220 VPS13BQ7Z7G8 4022 aa9.18□□□□□ -0.94
CHD1-202ENST00000414220 MAP1LC3CQ9BXW4 147 aa9.18□□□□□ -0.94
CHD1-202ENST00000414220 UBE2BP63146 152 aa9.17□□□□□ -0.94
CHD1-202ENST00000414220 LBHQ53QV2 105 aaPredicted RBP9.17□□□□□ -0.94
CHD1-202ENST00000414220 TMEM223A0PJW6 202 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 FAM168BA1KXE4 195 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 M0QXV9 152 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST1H2BKO60814 126 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST1H2BJP06899 126 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST1H2BOP23527 126 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 PLNP26678 52 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST1H2BBP33778 126 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST1H2BDP58876 126 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 LINC00310P59036 64 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST1H2BCP62807 126 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 COX17Q14061 63 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST2H2BEQ16778 126 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.16□□□□□ -0.94
CHD1-202ENST00000414220 C9orf129Q5T035 196 aaKnown RBP9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST1H2BHQ93079 126 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST1H2BNQ99877 126 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 HIST1H2BMQ99879 126 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 XAGE1AQ9HD64 81 aa9.16□□□□□ -0.94
CHD1-202ENST00000414220 KRTAP29-1A8MX34 341 aaPredicted RBP9.15□□□□□ -0.94
CHD1-202ENST00000414220 NUPR1O60356 82 aa9.15□□□□□ -0.94
CHD1-202ENST00000414220 PFN2P35080 140 aa9.14□□□□□ -0.95
CHD1-202ENST00000414220 HERVK_113P61574 105 aa9.14□□□□□ -0.95
CHD1-202ENST00000414220 ODF1Q14990 250 aa9.14□□□□□ -0.95
CHD1-202ENST00000414220 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
CHD1-202ENST00000414220 ERG28Q9UKR5 140 aa9.14□□□□□ -0.95
CHD1-202ENST00000414220 LINC00587B1AMM8 73 aa9.13□□□□□ -0.95
CHD1-202ENST00000414220 ATP6V1G1O75348 118 aa9.13□□□□□ -0.95
CHD1-202ENST00000414220 DPM2O94777 84 aa9.13□□□□□ -0.95
CHD1-202ENST00000414220 C1orf137Q5JT78 98 aa9.13□□□□□ -0.95
CHD1-202ENST00000414220 PSORS1C2Q9UIG4 136 aa9.13□□□□□ -0.95
CHD1-202ENST00000414220 HNRNPA3P51991 378 aaKnown RBP9.12□□□□□ -0.95
CHD1-202ENST00000414220 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
CHD1-202ENST00000414220 C22orf24Q9Y442 160 aa9.12□□□□□ -0.95
CHD1-202ENST00000414220 FLG2Q5D862 2391 aaPredicted RBP9.12□□□□□ -0.95
CHD1-202ENST00000414220 IGKCP01834 107 aa9.11□□□□□ -0.95
CHD1-202ENST00000414220 HERV-K104P63124 156 aa9.11□□□□□ -0.95
CHD1-202ENST00000414220 REG3GQ6UW15 175 aa9.11□□□□□ -0.95
CHD1-202ENST00000414220 NKAPP1Q8N9T2 125 aa9.11□□□□□ -0.95
CHD1-202ENST00000414220 TP73-AS1Q9UF72 201 aa9.11□□□□□ -0.95
CHD1-202ENST00000414220 PLA2G2DQ9UNK4 145 aa9.11□□□□□ -0.95
CHD1-202ENST00000414220 MYMXA0A1B0GTQ4 84 aa9.1□□□□□ -0.95
CHD1-202ENST00000414220 LINC00158P58513 81 aa9.1□□□□□ -0.95
CHD1-202ENST00000414220 PLEKHB2Q96CS7 222 aa9.1□□□□□ -0.95
CHD1-202ENST00000414220 RPL24P83731 157 aaKnown RBP9.09□□□□□ -0.95
CHD1-202ENST00000414220 MEIG1Q5JSS6 88 aa9.09□□□□□ -0.95
CHD1-202ENST00000414220 SERTAD4-AS1Q5TG53 156 aa9.09□□□□□ -0.95
CHD1-202ENST00000414220 MRPL55Q7Z7F7 128 aaKnown RBP9.09□□□□□ -0.95
CHD1-202ENST00000414220 LEPROTO15243 131 aa9.08□□□□□ -0.96
CHD1-202ENST00000414220 NDUFA12Q9UI09 145 aa9.08□□□□□ -0.96
CHD1-202ENST00000414220 SYS1-DBNDD2H3BUS1 97 aa9.07□□□□□ -0.96
CHD1-202ENST00000414220 COA6Q5JTJ3 125 aaKnown RBP9.07□□□□□ -0.96
CHD1-202ENST00000414220 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms