RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 LINC00269Q8N2A0 174 aa5.99□□□□□ -1.45
RFFL-203ENST00000413582 OR5A1Q8NGJ0 315 aa5.99□□□□□ -1.45
RFFL-203ENST00000413582 AMELXQ99217 191 aa5.99□□□□□ -1.45
RFFL-203ENST00000413582 CDC42SE2Q9NRR3 84 aa5.99□□□□□ -1.45
RFFL-203ENST00000413582 IGLV10-54A0A075B6I4 117 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 C20orf202A1L168 122 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 CCL25O15444 150 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 KRTDAPP60985 99 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 JOSD1Q15040 202 aaPredicted RBP5.98□□□□□ -1.45
RFFL-203ENST00000413582 LINC01545Q5VT33 79 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 TEX43Q6ZNM6 134 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 LINC00173Q6ZV60 143 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 ZNF664Q8N3J9 261 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 DPH3Q96FX2 82 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 KRTAP9-2Q9BYQ4 174 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 VCX2Q9H322 139 aa5.98□□□□□ -1.45
RFFL-203ENST00000413582 LPAP08519 4548 aa5.97□□□□□ -1.45
RFFL-203ENST00000413582 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.97□□□□□ -1.45
RFFL-203ENST00000413582 SMIM6P0DI80 62 aa5.97□□□□□ -1.45
RFFL-203ENST00000413582 SEC11AP67812 179 aa5.97□□□□□ -1.45
RFFL-203ENST00000413582 FAM19A3Q7Z5A8 133 aa5.97□□□□□ -1.45
RFFL-203ENST00000413582 FAM104AQ969W3 186 aa5.97□□□□□ -1.45
RFFL-203ENST00000413582 C2orf88Q9BSF0 95 aa5.97□□□□□ -1.45
RFFL-203ENST00000413582 CST9LQ9H4G1 147 aa5.97□□□□□ -1.45
RFFL-203ENST00000413582 IGLV4-60A0A075B6I1 120 aa5.96□□□□□ -1.46
RFFL-203ENST00000413582 F8VRH5 84 aa5.96□□□□□ -1.46
RFFL-203ENST00000413582 REG3AQ06141 175 aa5.96□□□□□ -1.46
RFFL-203ENST00000413582 REG3GQ6UW15 175 aa5.96□□□□□ -1.46
RFFL-203ENST00000413582 PLNP26678 52 aa5.95□□□□□ -1.46
RFFL-203ENST00000413582 SPINK6Q6UWN8 80 aa5.95□□□□□ -1.46
RFFL-203ENST00000413582 Q6ZUT4 128 aa5.95□□□□□ -1.46
RFFL-203ENST00000413582 LINC00518Q8N0U6 118 aa5.95□□□□□ -1.46
RFFL-203ENST00000413582 CHTOPQ9Y3Y2 248 aaKnown RBP5.95□□□□□ -1.46
RFFL-203ENST00000413582 TRAV8-4A0A0B4J246 113 aa5.94□□□□□ -1.46
RFFL-203ENST00000413582 SCGB1D1O95968 90 aa5.94□□□□□ -1.46
RFFL-203ENST00000413582 UBE2D1P51668 147 aa5.94□□□□□ -1.46
RFFL-203ENST00000413582 COX6A2Q02221 97 aa5.94□□□□□ -1.46
RFFL-203ENST00000413582 PYY3Q5JQD4 70 aa5.94□□□□□ -1.46
RFFL-203ENST00000413582 C15orf56Q8N910 161 aa5.94□□□□□ -1.46
RFFL-203ENST00000413582 OPRPNQ99935 248 aaPredicted RBP5.94□□□□□ -1.46
RFFL-203ENST00000413582 IGKV2-24A0A0C4DH68 120 aa5.93□□□□□ -1.46
RFFL-203ENST00000413582 TINCRA0A1B0GVN0 87 aa5.93□□□□□ -1.46
RFFL-203ENST00000413582 DPM2O94777 84 aa5.93□□□□□ -1.46
RFFL-203ENST00000413582 IGKCP01834 107 aa5.93□□□□□ -1.46
RFFL-203ENST00000413582 IGLC3P0DOY3 106 aa5.93□□□□□ -1.46
RFFL-203ENST00000413582 STPG4Q8N801 248 aa5.93□□□□□ -1.46
RFFL-203ENST00000413582 MRPL35Q9NZE8 188 aaKnown RBP5.93□□□□□ -1.46
RFFL-203ENST00000413582 MUC2Q02817 5179 aa5.93□□□□□ -1.46
RFFL-203ENST00000413582 H0Y8G0 127 aa5.92□□□□□ -1.46
RFFL-203ENST00000413582 HERVK_113P63121 156 aa5.92□□□□□ -1.46
RFFL-203ENST00000413582 SRSF9Q13242 221 aaKnown RBP eCLIP5.92□□□□□ -1.46
RFFL-203ENST00000413582 SS18Q15532 418 aa5.92□□□□□ -1.46
RFFL-203ENST00000413582 IGLV4-69A0A075B6H9 119 aa5.91□□□□□ -1.46
RFFL-203ENST00000413582 IGLV5-45A0A087WSX0 123 aa5.91□□□□□ -1.46
RFFL-203ENST00000413582 A0A096LNI7 61 aa5.91□□□□□ -1.46
RFFL-203ENST00000413582 LINC00959A0A1B0GUT2 108 aa5.91□□□□□ -1.46
RFFL-203ENST00000413582 MALP21145 153 aa5.91□□□□□ -1.46
RFFL-203ENST00000413582 LINC01561Q8N1V8 128 aa5.91□□□□□ -1.46
RFFL-203ENST00000413582 C11orf86A6NJI1 115 aa5.9□□□□□ -1.46
RFFL-203ENST00000413582 HSBP1L1C9JCN9 74 aa5.9□□□□□ -1.46
RFFL-203ENST00000413582 S100A12P80511 92 aa5.9□□□□□ -1.46
RFFL-203ENST00000413582 HIGD2BQ4VC39 106 aa5.9□□□□□ -1.46
RFFL-203ENST00000413582 RNASE13Q5GAN3 156 aaKnown RBP5.9□□□□□ -1.46
RFFL-203ENST00000413582 LINC00242Q5T6M2 205 aa5.9□□□□□ -1.46
RFFL-203ENST00000413582 ZC2HC1BQ5TFG8 222 aa5.9□□□□□ -1.46
RFFL-203ENST00000413582 C12orf57Q99622 126 aa5.9□□□□□ -1.46
RFFL-203ENST00000413582 GEMIN7Q9H840 131 aaKnown RBP5.9□□□□□ -1.46
RFFL-203ENST00000413582 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.47
RFFL-203ENST00000413582 TRAV13-1A0A0B4J241 112 aa5.89□□□□□ -1.47
RFFL-203ENST00000413582 GAGE12HA6NDE8 117 aa5.89□□□□□ -1.47
RFFL-203ENST00000413582 H3BRM9 83 aa5.89□□□□□ -1.47
RFFL-203ENST00000413582 HERVK_113P61574 105 aa5.89□□□□□ -1.47
RFFL-203ENST00000413582 CD164L2Q6UWJ8 174 aa5.89□□□□□ -1.47
RFFL-203ENST00000413582 PMCHL2Q9BQD1 86 aa5.89□□□□□ -1.47
RFFL-203ENST00000413582 GVQW2A0A096LPI5 108 aaPredicted RBP5.88□□□□□ -1.47
RFFL-203ENST00000413582 IGHV3OR16-9A0A0B4J2B5 98 aa5.88□□□□□ -1.47
RFFL-203ENST00000413582 IGKV3OR2-268A0A0C4DH90 116 aa5.88□□□□□ -1.47
RFFL-203ENST00000413582 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
RFFL-203ENST00000413582 ZNF22P17026 224 aaPredicted RBP5.88□□□□□ -1.47
RFFL-203ENST00000413582 Q6ZRP5 223 aa5.88□□□□□ -1.47
RFFL-203ENST00000413582 VAMP8Q9BV40 100 aa5.88□□□□□ -1.47
RFFL-203ENST00000413582 A0A087WZ39 114 aa5.87□□□□□ -1.47
RFFL-203ENST00000413582 E9PLD3 99 aa5.87□□□□□ -1.47
RFFL-203ENST00000413582 TMEM170BQ5T4T1 132 aa5.87□□□□□ -1.47
RFFL-203ENST00000413582 CHCHD10Q8WYQ3 142 aaPredicted RBP5.87□□□□□ -1.47
RFFL-203ENST00000413582 LINC00474Q9P2X8 69 aa5.87□□□□□ -1.47
RFFL-203ENST00000413582 TMEM223A0PJW6 202 aa5.86□□□□□ -1.47
RFFL-203ENST00000413582 ATOH7Q8N100 152 aa5.86□□□□□ -1.47
RFFL-203ENST00000413582 CDKN2A-AS1Q9UH64 79 aa5.86□□□□□ -1.47
RFFL-203ENST00000413582 IGHV1-58A0A0C4DH39 117 aa5.85□□□□□ -1.47
RFFL-203ENST00000413582 FOXI1Q12951 378 aa5.85□□□□□ -1.47
RFFL-203ENST00000413582 PLEKHB2Q96CS7 222 aa5.85□□□□□ -1.47
RFFL-203ENST00000413582 IGLV5-39A0A0G2JS06 123 aa5.84□□□□□ -1.47
RFFL-203ENST00000413582 A0A0U1RQV1 116 aa5.84□□□□□ -1.47
RFFL-203ENST00000413582 COX7A2LO14548 114 aa5.84□□□□□ -1.47
RFFL-203ENST00000413582 LEPROTO15243 131 aa5.84□□□□□ -1.47
RFFL-203ENST00000413582 APOMO95445 188 aa5.84□□□□□ -1.47
RFFL-203ENST00000413582 XCL1P47992 114 aa5.84□□□□□ -1.47
RFFL-203ENST00000413582 SPATA45Q537H7 98 aa5.84□□□□□ -1.47
RFFL-203ENST00000413582 PSORS1C2Q9UIG4 136 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms