RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 UTP20O75691 2785 aaKnown RBP12.17□□□□□ -0.46
SDCBP-202ENST00000413219 A0A087WVE0 104 aa12.17□□□□□ -0.46
SDCBP-202ENST00000413219 GYPEP15421 78 aa12.17□□□□□ -0.46
SDCBP-202ENST00000413219 TMEM258P61165 79 aa12.17□□□□□ -0.46
SDCBP-202ENST00000413219 C2CD3Q4AC94 2353 aa12.17□□□□□ -0.46
SDCBP-202ENST00000413219 C16orf95Q9H693 158 aa12.17□□□□□ -0.46
SDCBP-202ENST00000413219 CHD6Q8TD26 2715 aa12.16□□□□□ -0.46
SDCBP-202ENST00000413219 POLQO75417 2590 aa12.16□□□□□ -0.46
SDCBP-202ENST00000413219 DEFB130BP0DP73 79 aa12.15□□□□□ -0.46
SDCBP-202ENST00000413219 DEFB130AP0DP74 79 aa12.15□□□□□ -0.46
SDCBP-202ENST00000413219 KIAA0087Q14695 138 aa12.15□□□□□ -0.46
SDCBP-202ENST00000413219 LYPD5Q6UWN5 251 aa12.15□□□□□ -0.46
SDCBP-202ENST00000413219 CSMD2Q7Z408 3487 aa12.14□□□□□ -0.47
SDCBP-202ENST00000413219 LINC01006Q8NI28 216 aa12.14□□□□□ -0.47
SDCBP-202ENST00000413219 IGSF10Q6WRI0 2623 aa12.14□□□□□ -0.47
SDCBP-202ENST00000413219 NOTCH3Q9UM47 2321 aa12.14□□□□□ -0.47
SDCBP-202ENST00000413219 IGHV4-28A0A0C4DH34 117 aa12.14□□□□□ -0.47
SDCBP-202ENST00000413219 LOC107984640A0A0U1RRK4 108 aa12.14□□□□□ -0.47
SDCBP-202ENST00000413219 TEX15Q9BXT5 2789 aa12.13□□□□□ -0.47
SDCBP-202ENST00000413219 CD164L2Q6UWJ8 174 aa12.13□□□□□ -0.47
SDCBP-202ENST00000413219 ACACBO00763 2458 aa12.13□□□□□ -0.47
SDCBP-202ENST00000413219 TRBV10-3A0A0K0K1G6 114 aa12.12□□□□□ -0.47
SDCBP-202ENST00000413219 CYSTM1Q9H1C7 97 aa12.12□□□□□ -0.47
SDCBP-202ENST00000413219 PRO0255Q9UI72 69 aa12.12□□□□□ -0.47
SDCBP-202ENST00000413219 AKAP9Q99996 3911 aa12.12□□□□□ -0.47
SDCBP-202ENST00000413219 MYO18BQ8IUG5 2567 aa12.11□□□□□ -0.47
SDCBP-202ENST00000413219 PRR3P79522 188 aaKnown RBP12.11□□□□□ -0.47
SDCBP-202ENST00000413219 WNK1Q9H4A3 2382 aa12.11□□□□□ -0.47
SDCBP-202ENST00000413219 NAV2Q8IVL1 2488 aa12.1□□□□□ -0.47
SDCBP-202ENST00000413219 CLPSL2Q6UWE3 100 aa12.1□□□□□ -0.47
SDCBP-202ENST00000413219 RNASE1P07998 156 aaKnown RBP12.09□□□□□ -0.47
SDCBP-202ENST00000413219 FAM19A5Q7Z5A7 132 aaPredicted RBP12.09□□□□□ -0.47
SDCBP-202ENST00000413219 MUC7Q8TAX7 377 aa12.09□□□□□ -0.47
SDCBP-202ENST00000413219 UBL5Q9BZL1 73 aa12.09□□□□□ -0.47
SDCBP-202ENST00000413219 SMIM9A6NGZ8 99 aa12.07□□□□□ -0.48
SDCBP-202ENST00000413219 LINC00575Q6W349 94 aa12.07□□□□□ -0.48
SDCBP-202ENST00000413219 CHCHD10Q8WYQ3 142 aaPredicted RBP12.07□□□□□ -0.48
SDCBP-202ENST00000413219 DPH3Q96FX2 82 aa12.07□□□□□ -0.48
SDCBP-202ENST00000413219 PTPN13Q12923 2485 aa12.07□□□□□ -0.48
SDCBP-202ENST00000413219 PIEZO1Q92508 2521 aa12.07□□□□□ -0.48
SDCBP-202ENST00000413219 C6orf99Q4VX62 202 aa12.07□□□□□ -0.48
SDCBP-202ENST00000413219 BBC3Q96PG8 261 aaPredicted RBP12.07□□□□□ -0.48
SDCBP-202ENST00000413219 SETXQ7Z333 2677 aaKnown RBP12.06□□□□□ -0.48
SDCBP-202ENST00000413219 PRB1P04280 392 aa12.06□□□□□ -0.48
SDCBP-202ENST00000413219 LINC00269Q8N2A0 174 aa12.06□□□□□ -0.48
SDCBP-202ENST00000413219 X6R8D5 127 aa12.06□□□□□ -0.48
SDCBP-202ENST00000413219 EPG5Q9HCE0 2579 aa12.05□□□□□ -0.48
SDCBP-202ENST00000413219 GHRHP01286 108 aa12.05□□□□□ -0.48
SDCBP-202ENST00000413219 HILS1P60008 231 aa12.05□□□□□ -0.48
SDCBP-202ENST00000413219 TLN2Q9Y4G6 2542 aa12.05□□□□□ -0.48
SDCBP-202ENST00000413219 FAM208BQ5VWN6 2430 aa12.05□□□□□ -0.48
SDCBP-202ENST00000413219 LOC110117498A0A087WWA1 95 aa12.04□□□□□ -0.48
SDCBP-202ENST00000413219 NDUFC2-KCTD14E9PQ53 114 aa12.04□□□□□ -0.48
SDCBP-202ENST00000413219 CACNA1AO00555 2505 aa12.04□□□□□ -0.48
SDCBP-202ENST00000413219 ZNF561-AS1K7EIQ3 104 aa12.04□□□□□ -0.48
SDCBP-202ENST00000413219 WFDC11Q8NEX6 87 aa12.04□□□□□ -0.48
SDCBP-202ENST00000413219 LYRM9A8MSI8 78 aa12.03□□□□□ -0.48
SDCBP-202ENST00000413219 BCE1O60756 84 aa12.03□□□□□ -0.48
SDCBP-202ENST00000413219 REG3AQ06141 175 aa12.03□□□□□ -0.48
SDCBP-202ENST00000413219 ENHOQ6UWT2 76 aa12.03□□□□□ -0.48
SDCBP-202ENST00000413219 Q6ZQT0 140 aa12.03□□□□□ -0.48
SDCBP-202ENST00000413219 A0A096LPF7 62 aa12.02□□□□□ -0.48
SDCBP-202ENST00000413219 RBM3P98179 157 aaKnown RBP12.02□□□□□ -0.48
SDCBP-202ENST00000413219 FAM19A1Q7Z5A9 133 aa12.02□□□□□ -0.48
SDCBP-202ENST00000413219 C6orf223Q8N319 242 aa12.02□□□□□ -0.48
SDCBP-202ENST00000413219 H3BQ85 93 aa12.02□□□□□ -0.49
SDCBP-202ENST00000413219 C9orf116Q5BN46 136 aaPredicted RBP12.02□□□□□ -0.49
SDCBP-202ENST00000413219 Q8NDZ9 215 aa12.02□□□□□ -0.49
SDCBP-202ENST00000413219 JMJD1CQ15652 2540 aa12.01□□□□□ -0.49
SDCBP-202ENST00000413219 TRAV23DV6A0A075B6W5 121 aa12.01□□□□□ -0.49
SDCBP-202ENST00000413219 ANGP03950 147 aaKnown RBP12.01□□□□□ -0.49
SDCBP-202ENST00000413219 C5orf47Q569G3 176 aa12.01□□□□□ -0.49
SDCBP-202ENST00000413219 WFDC9Q8NEX5 89 aa12.01□□□□□ -0.49
SDCBP-202ENST00000413219 LRRK2Q5S007 2527 aa11.99□□□□□ -0.49
SDCBP-202ENST00000413219 CENPEQ02224 2701 aa11.99□□□□□ -0.49
SDCBP-202ENST00000413219 IGLV10-54A0A075B6I4 117 aa11.99□□□□□ -0.49
SDCBP-202ENST00000413219 A0A0J9YWU9 116 aa11.98□□□□□ -0.49
SDCBP-202ENST00000413219 IGLV6-57P01721 117 aa11.98□□□□□ -0.49
SDCBP-202ENST00000413219 IGHV4-30-4P0DP06 118 aa11.98□□□□□ -0.49
SDCBP-202ENST00000413219 PDE6GP18545 87 aa11.98□□□□□ -0.49
SDCBP-202ENST00000413219 UBR5O95071 2799 aaPredicted RBP11.98□□□□□ -0.49
SDCBP-202ENST00000413219 ZNF843Q8N446 348 aa11.98□□□□□ -0.49
SDCBP-202ENST00000413219 ABCA12Q86UK0 2595 aa11.97□□□□□ -0.49
SDCBP-202ENST00000413219 KRTAP1-1Q07627 177 aa11.96□□□□□ -0.49
SDCBP-202ENST00000413219 DSCR8Q96T75 97 aa11.96□□□□□ -0.49
SDCBP-202ENST00000413219 SPAG11BQ08648 103 aa11.96□□□□□ -0.5
SDCBP-202ENST00000413219 LAMTOR3Q9UHA4 124 aa11.96□□□□□ -0.5
SDCBP-202ENST00000413219 ZNF462Q96JM2 2506 aa11.95□□□□□ -0.5
SDCBP-202ENST00000413219 C9orf66Q5T8R8 295 aa11.95□□□□□ -0.5
SDCBP-202ENST00000413219 UNQ6190/PRO20217Q6UXQ8 127 aa11.95□□□□□ -0.5
SDCBP-202ENST00000413219 Q8N3U1 123 aa11.95□□□□□ -0.5
SDCBP-202ENST00000413219 C10orf25Q5T742 122 aa11.94□□□□□ -0.5
SDCBP-202ENST00000413219 ITPR3Q14573 2671 aa11.93□□□□□ -0.5
SDCBP-202ENST00000413219 TRAV7A0A075B6U4 112 aa11.93□□□□□ -0.5
SDCBP-202ENST00000413219 LINC00482Q8N8I6 264 aa11.93□□□□□ -0.5
SDCBP-202ENST00000413219 NBPF19A0A087WUL8 3843 aa11.93□□□□□ -0.5
SDCBP-202ENST00000413219 SONP18583 2426 aaKnown RBP11.93□□□□□ -0.5
SDCBP-202ENST00000413219 GVQW2A0A096LPI5 108 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-202ENST00000413219 OXTP01178 125 aa11.93□□□□□ -0.5
SDCBP-202ENST00000413219 LINC01547P58512 204 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms