RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 C6orf48Q9UBA6 75 aa8.89□□□□□ -0.99
CPNE1-206ENST00000412056 HSPB8Q9UJY1 196 aa8.89□□□□□ -0.99
CPNE1-206ENST00000412056 LOC107984640A0A0U1RRK4 108 aa8.88□□□□□ -0.99
CPNE1-206ENST00000412056 F8VRH5 84 aa8.88□□□□□ -0.99
CPNE1-206ENST00000412056 H3BRM9 83 aa8.88□□□□□ -0.99
CPNE1-206ENST00000412056 Q8N1X5 172 aa8.88□□□□□ -0.99
CPNE1-206ENST00000412056 PKIGQ9Y2B9 76 aa8.88□□□□□ -0.99
CPNE1-206ENST00000412056 ODF1Q14990 250 aa8.87□□□□□ -0.99
CPNE1-206ENST00000412056 MAJINQ3KP22 176 aa8.87□□□□□ -0.99
CPNE1-206ENST00000412056 C6orf226Q5I0X4 101 aa8.87□□□□□ -0.99
CPNE1-206ENST00000412056 COA6Q5JTJ3 125 aaKnown RBP8.87□□□□□ -0.99
CPNE1-206ENST00000412056 TMEM170BQ5T4T1 132 aa8.87□□□□□ -0.99
CPNE1-206ENST00000412056 COX7B2Q8TF08 81 aa8.87□□□□□ -0.99
CPNE1-206ENST00000412056 APOBP04114 4563 aaKnown RBP8.87□□□□□ -0.99
CPNE1-206ENST00000412056 A0A087WYN8 130 aa8.86□□□□□ -0.99
CPNE1-206ENST00000412056 PTTG1IPP53801 180 aa8.86□□□□□ -0.99
CPNE1-206ENST00000412056 CKS1BP61024 79 aa8.86□□□□□ -0.99
CPNE1-206ENST00000412056 RPL18AQ02543 176 aaKnown RBP8.86□□□□□ -0.99
CPNE1-206ENST00000412056 GAGE2BQ13066 116 aa8.86□□□□□ -0.99
CPNE1-206ENST00000412056 KRTAP4-5Q9BYR2 181 aa8.86□□□□□ -0.99
CPNE1-206ENST00000412056 IGLV5-39A0A0G2JS06 123 aa8.85□□□□□ -0.99
CPNE1-206ENST00000412056 TRBV30A0A0K0K1B3 111 aa8.85□□□□□ -0.99
CPNE1-206ENST00000412056 C9orf116Q5BN46 136 aaPredicted RBP8.85□□□□□ -0.99
CPNE1-206ENST00000412056 DPH3Q96FX2 82 aa8.85□□□□□ -0.99
CPNE1-206ENST00000412056 HSPG2P98160 4391 aa8.85□□□□□ -0.99
CPNE1-206ENST00000412056 RYR1P21817 5038 aa8.84□□□□□ -0.99
CPNE1-206ENST00000412056 CXCL5P42830 114 aa8.84□□□□□ -0.99
CPNE1-206ENST00000412056 Q5VSD8 79 aa8.83□□□□□ -1
CPNE1-206ENST00000412056 LINC00528Q8N1L1 170 aa8.83□□□□□ -1
CPNE1-206ENST00000412056 STPG4Q8N801 248 aa8.83□□□□□ -1
CPNE1-206ENST00000412056 PMCHL2Q9BQD1 86 aa8.83□□□□□ -1
CPNE1-206ENST00000412056 DNAH8Q96JB1 4490 aa8.82□□□□□ -1
CPNE1-206ENST00000412056 TMEM223A0PJW6 202 aa8.82□□□□□ -1
CPNE1-206ENST00000412056 EPM2AB3EWF7 344 aa8.82□□□□□ -1
CPNE1-206ENST00000412056 TLX1NBP0CAT3 122 aa8.82□□□□□ -1
CPNE1-206ENST00000412056 Q6ZRP5 223 aa8.82□□□□□ -1
CPNE1-206ENST00000412056 MAP1LC3CQ9BXW4 147 aa8.82□□□□□ -1
CPNE1-206ENST00000412056 PLAC8Q9NZF1 115 aa8.82□□□□□ -1
CPNE1-206ENST00000412056 LINC00474Q9P2X8 69 aa8.82□□□□□ -1
CPNE1-206ENST00000412056 NDUFC2-KCTD14E9PQ53 114 aa8.8□□□□□ -1
CPNE1-206ENST00000412056 GAGE2EQ4V326 116 aa8.8□□□□□ -1
CPNE1-206ENST00000412056 GAGE2DQ9UEU5 116 aa8.8□□□□□ -1
CPNE1-206ENST00000412056 HERC2O95714 4834 aa8.8□□□□□ -1
CPNE1-206ENST00000412056 FAM229AH3BQW9 127 aa8.79□□□□□ -1
CPNE1-206ENST00000412056 SYS1-DBNDD2H3BUS1 97 aa8.79□□□□□ -1
CPNE1-206ENST00000412056 DPM2O94777 84 aa8.79□□□□□ -1
CPNE1-206ENST00000412056 PLNP26678 52 aa8.79□□□□□ -1
CPNE1-206ENST00000412056 A0A1W2PNN7 141 aa8.78□□□□□ -1
CPNE1-206ENST00000412056 IGKCP01834 107 aa8.78□□□□□ -1
CPNE1-206ENST00000412056 C3orf79P0CE67 100 aa8.77□□□□□ -1.01
CPNE1-206ENST00000412056 FAM168BA1KXE4 195 aa8.76□□□□□ -1.01
CPNE1-206ENST00000412056 KRTDAPP60985 99 aa8.76□□□□□ -1.01
CPNE1-206ENST00000412056 C9orf129Q5T035 196 aaKnown RBP8.76□□□□□ -1.01
CPNE1-206ENST00000412056 LINC01545Q5VT33 79 aa8.76□□□□□ -1.01
CPNE1-206ENST00000412056 PET117Q6UWS5 81 aa8.76□□□□□ -1.01
CPNE1-206ENST00000412056 LOC105371267A0A1B0GV96 52 aa8.75□□□□□ -1.01
CPNE1-206ENST00000412056 PLA2G1BP04054 148 aaKnown RBP8.75□□□□□ -1.01
CPNE1-206ENST00000412056 HIST3H2BBQ8N257 126 aa8.75□□□□□ -1.01
CPNE1-206ENST00000412056 ZNF625Q96I27 306 aaPredicted RBP8.75□□□□□ -1.01
CPNE1-206ENST00000412056 TSPEAR-AS2P59090 65 aa8.74□□□□□ -1.01
CPNE1-206ENST00000412056 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
CPNE1-206ENST00000412056 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
CPNE1-206ENST00000412056 FAM19A5Q7Z5A7 132 aaPredicted RBP8.74□□□□□ -1.01
CPNE1-206ENST00000412056 XAGE1AQ9HD64 81 aa8.74□□□□□ -1.01
CPNE1-206ENST00000412056 LEPROTO15243 131 aa8.73□□□□□ -1.01
CPNE1-206ENST00000412056 S100A6P06703 90 aa8.73□□□□□ -1.01
CPNE1-206ENST00000412056 PFN2P35080 140 aa8.73□□□□□ -1.01
CPNE1-206ENST00000412056 HERVK_113P61574 105 aa8.73□□□□□ -1.01
CPNE1-206ENST00000412056 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
CPNE1-206ENST00000412056 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
CPNE1-206ENST00000412056 SFTA2Q6UW10 78 aa8.72□□□□□ -1.01
CPNE1-206ENST00000412056 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
CPNE1-206ENST00000412056 C7orf33Q8WU49 177 aa8.72□□□□□ -1.01
CPNE1-206ENST00000412056 PLEKHB2Q96CS7 222 aa8.72□□□□□ -1.01
CPNE1-206ENST00000412056 S100A2P29034 98 aa8.71□□□□□ -1.02
CPNE1-206ENST00000412056 HIST1H2BLQ99880 126 aa8.71□□□□□ -1.02
CPNE1-206ENST00000412056 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
CPNE1-206ENST00000412056 SNRPEP62304 92 aaKnown RBP8.7□□□□□ -1.02
CPNE1-206ENST00000412056 SERTAD4-AS1Q5TG53 156 aa8.7□□□□□ -1.02
CPNE1-206ENST00000412056 J3QQQ9 107 aa8.69□□□□□ -1.02
CPNE1-206ENST00000412056 M0QXV9 152 aa8.69□□□□□ -1.02
CPNE1-206ENST00000412056 A0A0U1RRA0 63 aa8.68□□□□□ -1.02
CPNE1-206ENST00000412056 MYMXA0A1B0GTQ4 84 aa8.68□□□□□ -1.02
CPNE1-206ENST00000412056 C20orf202A1L168 122 aa8.68□□□□□ -1.02
CPNE1-206ENST00000412056 E9PLD3 99 aa8.68□□□□□ -1.02
CPNE1-206ENST00000412056 INAFM2P0DMQ5 153 aa8.68□□□□□ -1.02
CPNE1-206ENST00000412056 LGALS3P17931 250 aaKnown RBP8.68□□□□□ -1.02
CPNE1-206ENST00000412056 HERV-K104P63124 156 aa8.68□□□□□ -1.02
CPNE1-206ENST00000412056 COX17Q14061 63 aa8.68□□□□□ -1.02
CPNE1-206ENST00000412056 C5orf52A6NGY3 159 aa8.67□□□□□ -1.02
CPNE1-206ENST00000412056 LINC00158P58513 81 aa8.67□□□□□ -1.02
CPNE1-206ENST00000412056 PRR3P79522 188 aaKnown RBP8.67□□□□□ -1.02
CPNE1-206ENST00000412056 MEIG1Q5JSS6 88 aa8.67□□□□□ -1.02
CPNE1-206ENST00000412056 SND1-IT1Q9HBX3 110 aa8.67□□□□□ -1.02
CPNE1-206ENST00000412056 SMIM13P0DJ93 91 aa8.66□□□□□ -1.02
CPNE1-206ENST00000412056 HNRNPA3P51991 378 aaKnown RBP8.66□□□□□ -1.02
CPNE1-206ENST00000412056 KRTAP11-1Q8IUC1 163 aa8.66□□□□□ -1.02
CPNE1-206ENST00000412056 ATOH7Q8N100 152 aa8.66□□□□□ -1.02
CPNE1-206ENST00000412056 NMUP48645 174 aa8.65□□□□□ -1.02
CPNE1-206ENST00000412056 PLA2G2DQ9UNK4 145 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 1308.3 ms