RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 C6orf226Q5I0X4 101 aa9.85□□□□□ -0.83
TRAPPC12-203ENST00000411973 C10orf25Q5T742 122 aa9.85□□□□□ -0.83
TRAPPC12-203ENST00000411973 CIRBP-AS1Q8TBR5 109 aa9.85□□□□□ -0.83
TRAPPC12-203ENST00000411973 TOMM7Q9P0U1 55 aa9.85□□□□□ -0.83
TRAPPC12-203ENST00000411973 IGLV5-39A0A0G2JS06 123 aa9.84□□□□□ -0.83
TRAPPC12-203ENST00000411973 TRBV30A0A0K0K1B3 111 aa9.84□□□□□ -0.83
TRAPPC12-203ENST00000411973 LOC107984640A0A0U1RRK4 108 aa9.84□□□□□ -0.83
TRAPPC12-203ENST00000411973 CKS1BP61024 79 aa9.84□□□□□ -0.83
TRAPPC12-203ENST00000411973 C2orf82Q6UX34 121 aa9.84□□□□□ -0.83
TRAPPC12-203ENST00000411973 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
TRAPPC12-203ENST00000411973 LINC00474Q9P2X8 69 aa9.84□□□□□ -0.83
TRAPPC12-203ENST00000411973 C6orf48Q9UBA6 75 aa9.84□□□□□ -0.83
TRAPPC12-203ENST00000411973 A0A096LNI7 61 aa9.83□□□□□ -0.84
TRAPPC12-203ENST00000411973 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
TRAPPC12-203ENST00000411973 CHTF8P0CG12 524 aa9.83□□□□□ -0.84
TRAPPC12-203ENST00000411973 CXCL5P42830 114 aa9.83□□□□□ -0.84
TRAPPC12-203ENST00000411973 Q8N1X5 172 aa9.83□□□□□ -0.84
TRAPPC12-203ENST00000411973 COX7B2Q8TF08 81 aa9.83□□□□□ -0.84
TRAPPC12-203ENST00000411973 KRTAP17-1Q9BYP8 105 aa9.83□□□□□ -0.84
TRAPPC12-203ENST00000411973 TMEM170BQ5T4T1 132 aa9.82□□□□□ -0.84
TRAPPC12-203ENST00000411973 MAP1LC3CQ9BXW4 147 aa9.82□□□□□ -0.84
TRAPPC12-203ENST00000411973 IGKV2-24A0A0C4DH68 120 aa9.81□□□□□ -0.84
TRAPPC12-203ENST00000411973 H0Y8G0 127 aa9.81□□□□□ -0.84
TRAPPC12-203ENST00000411973 PTTG1IPP53801 180 aa9.81□□□□□ -0.84
TRAPPC12-203ENST00000411973 A0A087WYN8 130 aa9.79□□□□□ -0.84
TRAPPC12-203ENST00000411973 TMEM223A0PJW6 202 aa9.79□□□□□ -0.84
TRAPPC12-203ENST00000411973 SMR3BP02814 79 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC12-203ENST00000411973 PLNP26678 52 aa9.79□□□□□ -0.84
TRAPPC12-203ENST00000411973 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
TRAPPC12-203ENST00000411973 MAJINQ3KP22 176 aa9.79□□□□□ -0.84
TRAPPC12-203ENST00000411973 DPH3Q96FX2 82 aa9.79□□□□□ -0.84
TRAPPC12-203ENST00000411973 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
TRAPPC12-203ENST00000411973 SYS1-DBNDD2H3BUS1 97 aa9.78□□□□□ -0.84
TRAPPC12-203ENST00000411973 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
TRAPPC12-203ENST00000411973 DPM2O94777 84 aa9.77□□□□□ -0.85
TRAPPC12-203ENST00000411973 RPL18AQ02543 176 aaKnown RBP9.77□□□□□ -0.85
TRAPPC12-203ENST00000411973 C9orf116Q5BN46 136 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC12-203ENST00000411973 Q6ZRP5 223 aa9.77□□□□□ -0.85
TRAPPC12-203ENST00000411973 PET117Q6UWS5 81 aa9.76□□□□□ -0.85
TRAPPC12-203ENST00000411973 STPG4Q8N801 248 aa9.76□□□□□ -0.85
TRAPPC12-203ENST00000411973 EPM2AB3EWF7 344 aa9.75□□□□□ -0.85
TRAPPC12-203ENST00000411973 IGKCP01834 107 aa9.75□□□□□ -0.85
TRAPPC12-203ENST00000411973 PMCHL2Q9BQD1 86 aa9.75□□□□□ -0.85
TRAPPC12-203ENST00000411973 FAM229AH3BQW9 127 aa9.74□□□□□ -0.85
TRAPPC12-203ENST00000411973 LINC01545Q5VT33 79 aa9.74□□□□□ -0.85
TRAPPC12-203ENST00000411973 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
TRAPPC12-203ENST00000411973 LINC00528Q8N1L1 170 aa9.74□□□□□ -0.85
TRAPPC12-203ENST00000411973 C3orf79P0CE67 100 aa9.73□□□□□ -0.85
TRAPPC12-203ENST00000411973 GAGE2EQ4V326 116 aa9.73□□□□□ -0.85
TRAPPC12-203ENST00000411973 Q5VSD8 79 aa9.73□□□□□ -0.85
TRAPPC12-203ENST00000411973 KRTAP4-5Q9BYR2 181 aa9.73□□□□□ -0.85
TRAPPC12-203ENST00000411973 GAGE2DQ9UEU5 116 aa9.73□□□□□ -0.85
TRAPPC12-203ENST00000411973 A0A1W2PNN7 141 aa9.72□□□□□ -0.85
TRAPPC12-203ENST00000411973 S100A6P06703 90 aa9.72□□□□□ -0.85
TRAPPC12-203ENST00000411973 HIST3H2BBQ8N257 126 aa9.72□□□□□ -0.85
TRAPPC12-203ENST00000411973 ZNF625Q96I27 306 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-203ENST00000411973 SRRM2Q9UQ35 2752 aaKnown RBP9.71□□□□□ -0.85
TRAPPC12-203ENST00000411973 ABCA13Q86UQ4 5058 aa9.71□□□□□ -0.86
TRAPPC12-203ENST00000411973 KRTDAPP60985 99 aa9.7□□□□□ -0.86
TRAPPC12-203ENST00000411973 C9orf129Q5T035 196 aaKnown RBP9.7□□□□□ -0.86
TRAPPC12-203ENST00000411973 VPS13BQ7Z7G8 4022 aa9.7□□□□□ -0.86
TRAPPC12-203ENST00000411973 LEPROTO15243 131 aa9.69□□□□□ -0.86
TRAPPC12-203ENST00000411973 PLA2G1BP04054 148 aaKnown RBP9.69□□□□□ -0.86
TRAPPC12-203ENST00000411973 HERVK_113P61574 105 aa9.69□□□□□ -0.86
TRAPPC12-203ENST00000411973 COX17Q14061 63 aa9.69□□□□□ -0.86
TRAPPC12-203ENST00000411973 PLEKHB2Q96CS7 222 aa9.69□□□□□ -0.86
TRAPPC12-203ENST00000411973 HIST1H2BLQ99880 126 aa9.69□□□□□ -0.86
TRAPPC12-203ENST00000411973 S100A2P29034 98 aa9.68□□□□□ -0.86
TRAPPC12-203ENST00000411973 ERG28Q9UKR5 140 aa9.68□□□□□ -0.86
TRAPPC12-203ENST00000411973 SNRPEP62304 92 aaKnown RBP9.67□□□□□ -0.86
TRAPPC12-203ENST00000411973 C7orf33Q8WU49 177 aa9.67□□□□□ -0.86
TRAPPC12-203ENST00000411973 FAM168BA1KXE4 195 aa9.66□□□□□ -0.86
TRAPPC12-203ENST00000411973 C20orf202A1L168 122 aa9.66□□□□□ -0.86
TRAPPC12-203ENST00000411973 C5orf52A6NGY3 159 aa9.66□□□□□ -0.86
TRAPPC12-203ENST00000411973 TSPEAR-AS2P59090 65 aa9.66□□□□□ -0.86
TRAPPC12-203ENST00000411973 KRTAP10-4P60372 401 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC12-203ENST00000411973 HERV-K104P63124 156 aa9.66□□□□□ -0.86
TRAPPC12-203ENST00000411973 KRTAP7-1Q8IUC3 87 aa9.66□□□□□ -0.86
TRAPPC12-203ENST00000411973 XAGE1AQ9HD64 81 aa9.66□□□□□ -0.86
TRAPPC12-203ENST00000411973 NDUFA12Q9UI09 145 aa9.66□□□□□ -0.86
TRAPPC12-203ENST00000411973 MYMXA0A1B0GTQ4 84 aa9.65□□□□□ -0.86
TRAPPC12-203ENST00000411973 E9PLD3 99 aa9.65□□□□□ -0.86
TRAPPC12-203ENST00000411973 J3QQQ9 107 aa9.65□□□□□ -0.86
TRAPPC12-203ENST00000411973 PFN2P35080 140 aa9.65□□□□□ -0.86
TRAPPC12-203ENST00000411973 NMUP48645 174 aa9.64□□□□□ -0.87
TRAPPC12-203ENST00000411973 AKR1D1P51857 326 aa9.64□□□□□ -0.87
TRAPPC12-203ENST00000411973 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
TRAPPC12-203ENST00000411973 FAM19A5Q7Z5A7 132 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC12-203ENST00000411973 PLA2G2DQ9UNK4 145 aa9.63□□□□□ -0.87
TRAPPC12-203ENST00000411973 LINC00587B1AMM8 73 aa9.62□□□□□ -0.87
TRAPPC12-203ENST00000411973 LGALS3P17931 250 aaKnown RBP9.62□□□□□ -0.87
TRAPPC12-203ENST00000411973 PHF5AQ7RTV0 110 aaKnown RBP9.62□□□□□ -0.87
TRAPPC12-203ENST00000411973 PCLOQ9Y6V0 5065 aa9.61□□□□□ -0.87
TRAPPC12-203ENST00000411973 SERTAD4-AS1Q5TG53 156 aa9.61□□□□□ -0.87
TRAPPC12-203ENST00000411973 SND1-IT1Q9HBX3 110 aa9.61□□□□□ -0.87
TRAPPC12-203ENST00000411973 M0QXV9 152 aa9.6□□□□□ -0.87
TRAPPC12-203ENST00000411973 LINC00158P58513 81 aa9.6□□□□□ -0.87
TRAPPC12-203ENST00000411973 MEIG1Q5JSS6 88 aa9.6□□□□□ -0.87
TRAPPC12-203ENST00000411973 SMIM13P0DJ93 91 aa9.59□□□□□ -0.87
TRAPPC12-203ENST00000411973 PRR3P79522 188 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms