RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 C2orf82Q6UX34 121 aa13.34□□□□□ -0.27
C4orf48-202ENST00000409860 UNQ6190/PRO20217Q6UXQ8 127 aa13.34□□□□□ -0.27
C4orf48-202ENST00000409860 PKIGQ9Y2B9 76 aa13.34□□□□□ -0.27
C4orf48-202ENST00000409860 RNF151Q2KHN1 245 aa13.33□□□□□ -0.28
C4orf48-202ENST00000409860 LINC01620Q4KN68 170 aa13.33□□□□□ -0.28
C4orf48-202ENST00000409860 TRBV30A0A0K0K1B3 111 aa13.32□□□□□ -0.28
C4orf48-202ENST00000409860 C10orf25Q5T742 122 aa13.32□□□□□ -0.28
C4orf48-202ENST00000409860 DNAH5Q8TE73 4624 aa13.32□□□□□ -0.28
C4orf48-202ENST00000409860 PLEKHB2Q96CS7 222 aa13.31□□□□□ -0.28
C4orf48-202ENST00000409860 C6orf48Q9UBA6 75 aa13.31□□□□□ -0.28
C4orf48-202ENST00000409860 LEPROTO15243 131 aa13.3□□□□□ -0.28
C4orf48-202ENST00000409860 KRTAP10-1P60331 282 aa13.3□□□□□ -0.28
C4orf48-202ENST00000409860 SFTA2Q6UW10 78 aa13.3□□□□□ -0.28
C4orf48-202ENST00000409860 DYNC1H1Q14204 4646 aaKnown RBP13.29□□□□□ -0.28
C4orf48-202ENST00000409860 SCGB1D1O95968 90 aa13.28□□□□□ -0.28
C4orf48-202ENST00000409860 SDIM1Q6ZPB5 146 aa13.28□□□□□ -0.28
C4orf48-202ENST00000409860 ATOH7Q8N100 152 aa13.28□□□□□ -0.28
C4orf48-202ENST00000409860 EPPK1P58107 5090 aaKnown RBP13.28□□□□□ -0.28
C4orf48-202ENST00000409860 PKHD1P08F94 4074 aa13.28□□□□□ -0.28
C4orf48-202ENST00000409860 LOC107984640A0A0U1RRK4 108 aa13.27□□□□□ -0.29
C4orf48-202ENST00000409860 E9PLD3 99 aa13.27□□□□□ -0.29
C4orf48-202ENST00000409860 STPG4Q8N801 248 aa13.27□□□□□ -0.29
C4orf48-202ENST00000409860 J3QQQ9 107 aa13.26□□□□□ -0.29
C4orf48-202ENST00000409860 LGALS3P17931 250 aaKnown RBP13.26□□□□□ -0.29
C4orf48-202ENST00000409860 TSPEAR-AS2P59090 65 aa13.24□□□□□ -0.29
C4orf48-202ENST00000409860 RPL18AQ02543 176 aaKnown RBP13.24□□□□□ -0.29
C4orf48-202ENST00000409860 ZNF625Q96I27 306 aaPredicted RBP13.24□□□□□ -0.29
C4orf48-202ENST00000409860 NDUFA12Q9UI09 145 aa13.24□□□□□ -0.29
C4orf48-202ENST00000409860 MYMXA0A1B0GTQ4 84 aa13.23□□□□□ -0.29
C4orf48-202ENST00000409860 TLX1NBP0CAT3 122 aa13.23□□□□□ -0.29
C4orf48-202ENST00000409860 C9orf116Q5BN46 136 aaPredicted RBP13.23□□□□□ -0.29
C4orf48-202ENST00000409860 LRP1BQ9NZR2 4599 aa13.22□□□□□ -0.29
C4orf48-202ENST00000409860 HSBP1L1C9JCN9 74 aa13.22□□□□□ -0.29
C4orf48-202ENST00000409860 NMUP48645 174 aa13.22□□□□□ -0.29
C4orf48-202ENST00000409860 NDUFC2-KCTD14E9PQ53 114 aa13.21□□□□□ -0.29
C4orf48-202ENST00000409860 HERV-K104P63124 156 aa13.21□□□□□ -0.29
C4orf48-202ENST00000409860 GAGE2BQ13066 116 aa13.21□□□□□ -0.29
C4orf48-202ENST00000409860 A0A096LNI7 61 aa13.2□□□□□ -0.3
C4orf48-202ENST00000409860 IGKV2-24A0A0C4DH68 120 aa13.2□□□□□ -0.3
C4orf48-202ENST00000409860 PTTG1IPP53801 180 aa13.2□□□□□ -0.3
C4orf48-202ENST00000409860 JOSD1Q15040 202 aaPredicted RBP13.2□□□□□ -0.3
C4orf48-202ENST00000409860 LINC00474Q9P2X8 69 aa13.2□□□□□ -0.3
C4orf48-202ENST00000409860 ANKRD39Q53RE8 183 aa13.19□□□□□ -0.3
C4orf48-202ENST00000409860 Q6ZSA8 131 aa13.19□□□□□ -0.3
C4orf48-202ENST00000409860 FAM30AQ9NZY2 134 aa13.19□□□□□ -0.3
C4orf48-202ENST00000409860 ERG28Q9UKR5 140 aa13.19□□□□□ -0.3
C4orf48-202ENST00000409860 IGKV2D-26A0A0A0MRZ7 120 aa13.18□□□□□ -0.3
C4orf48-202ENST00000409860 CHTF8P0CG12 524 aa13.18□□□□□ -0.3
C4orf48-202ENST00000409860 Q6ZRP5 223 aa13.18□□□□□ -0.3
C4orf48-202ENST00000409860 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.18□□□□□ -0.3
C4orf48-202ENST00000409860 GAGE2EQ4V326 116 aa13.17□□□□□ -0.3
C4orf48-202ENST00000409860 MEIG1Q5JSS6 88 aa13.17□□□□□ -0.3
C4orf48-202ENST00000409860 GAGE2DQ9UEU5 116 aa13.17□□□□□ -0.3
C4orf48-202ENST00000409860 LINC00587B1AMM8 73 aa13.16□□□□□ -0.3
C4orf48-202ENST00000409860 PFN2P35080 140 aa13.16□□□□□ -0.3
C4orf48-202ENST00000409860 CIRBPQ14011 172 aaKnown RBP13.16□□□□□ -0.3
C4orf48-202ENST00000409860 COX17Q14061 63 aa13.16□□□□□ -0.3
C4orf48-202ENST00000409860 MAJINQ3KP22 176 aa13.16□□□□□ -0.3
C4orf48-202ENST00000409860 SPACA4Q8TDM5 124 aa13.16□□□□□ -0.3
C4orf48-202ENST00000409860 DPH3Q96FX2 82 aa13.16□□□□□ -0.3
C4orf48-202ENST00000409860 ZNF815PA8K554 130 aa13.14□□□□□ -0.31
C4orf48-202ENST00000409860 PANO1I0J062 215 aa13.14□□□□□ -0.31
C4orf48-202ENST00000409860 DNAH8Q96JB1 4490 aa13.14□□□□□ -0.31
C4orf48-202ENST00000409860 BIRC6Q9NR09 4857 aa13.13□□□□□ -0.31
C4orf48-202ENST00000409860 LINC00158P58513 81 aa13.13□□□□□ -0.31
C4orf48-202ENST00000409860 CDK2AP2O75956 126 aa13.12□□□□□ -0.31
C4orf48-202ENST00000409860 SMIM13P0DJ93 91 aa13.11□□□□□ -0.31
C4orf48-202ENST00000409860 PYY3Q5JQD4 70 aa13.11□□□□□ -0.31
C4orf48-202ENST00000409860 SCXQ7RTU7 201 aa13.11□□□□□ -0.31
C4orf48-202ENST00000409860 TTTY13Q9BZ97 58 aa13.11□□□□□ -0.31
C4orf48-202ENST00000409860 A0A0U1RRA0 63 aa13.1□□□□□ -0.31
C4orf48-202ENST00000409860 VAMP8Q9BV40 100 aa13.1□□□□□ -0.31
C4orf48-202ENST00000409860 XAGE1AQ9HD64 81 aa13.1□□□□□ -0.31
C4orf48-202ENST00000409860 A0A087WYN8 130 aa13.09□□□□□ -0.31
C4orf48-202ENST00000409860 A0A0J9YXY3 114 aa13.09□□□□□ -0.31
C4orf48-202ENST00000409860 HAMPP81172 84 aa13.09□□□□□ -0.31
C4orf48-202ENST00000409860 CIRBP-AS1Q8TBR5 109 aa13.09□□□□□ -0.31
C4orf48-202ENST00000409860 XGP55808 180 aa13.08□□□□□ -0.32
C4orf48-202ENST00000409860 C9orf129Q5T035 196 aaKnown RBP13.08□□□□□ -0.32
C4orf48-202ENST00000409860 PCP2Q8IVA1 136 aa13.08□□□□□ -0.32
C4orf48-202ENST00000409860 PLAC8Q9NZF1 115 aa13.07□□□□□ -0.32
C4orf48-202ENST00000409860 PAM16Q9Y3D7 125 aa13.07□□□□□ -0.32
C4orf48-202ENST00000409860 APOBP04114 4563 aaKnown RBP13.06□□□□□ -0.32
C4orf48-202ENST00000409860 SCGB1D4Q6XE38 83 aa13.06□□□□□ -0.32
C4orf48-202ENST00000409860 MIR7-3HGQ8N6C7 128 aa13.06□□□□□ -0.32
C4orf48-202ENST00000409860 SND1-IT1Q9HBX3 110 aa13.06□□□□□ -0.32
C4orf48-202ENST00000409860 SPATA45Q537H7 98 aa13.05□□□□□ -0.32
C4orf48-202ENST00000409860 TIMM17BO60830 172 aa13.04□□□□□ -0.32
C4orf48-202ENST00000409860 A0A1W2PNN7 141 aa13.03□□□□□ -0.32
C4orf48-202ENST00000409860 FAM19A5Q7Z5A7 132 aaPredicted RBP13.03□□□□□ -0.32
C4orf48-202ENST00000409860 FAM168BA1KXE4 195 aa13.02□□□□□ -0.33
C4orf48-202ENST00000409860 DAND5Q8N907 189 aa13.01□□□□□ -0.33
C4orf48-202ENST00000409860 EPM2AB3EWF7 344 aa13□□□□□ -0.33
C4orf48-202ENST00000409860 TMEM238C9JI98 176 aa13□□□□□ -0.33
C4orf48-202ENST00000409860 COX8AP10176 69 aa13□□□□□ -0.33
C4orf48-202ENST00000409860 RYR1P21817 5038 aa12.99□□□□□ -0.33
C4orf48-202ENST00000409860 LITAFQ99732 161 aa12.99□□□□□ -0.33
C4orf48-202ENST00000409860 PLA2G2DQ9UNK4 145 aa12.99□□□□□ -0.33
C4orf48-202ENST00000409860 LOC105371267A0A1B0GV96 52 aa12.98□□□□□ -0.33
C4orf48-202ENST00000409860 S100A12P80511 92 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms