RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 Q8N9L7 120 aa17.73■□□□□ 0.43
SPIRE1-202ENST00000409402 PRR3P79522 188 aaKnown RBP17.72■□□□□ 0.43
SPIRE1-202ENST00000409402 URB1-AS1Q96HZ7 61 aa17.71■□□□□ 0.43
SPIRE1-202ENST00000409402 LINC01561Q8N1V8 128 aa17.71■□□□□ 0.43
SPIRE1-202ENST00000409402 Q6JHZ5 121 aa17.7■□□□□ 0.42
SPIRE1-202ENST00000409402 PRYO14603 147 aa17.69■□□□□ 0.42
SPIRE1-202ENST00000409402 CELA1Q9UNI1 258 aa17.69■□□□□ 0.42
SPIRE1-202ENST00000409402 IMUPQ9GZP8 106 aa17.67■□□□□ 0.42
SPIRE1-202ENST00000409402 DOPEY1Q5JWR5 2465 aa17.67■□□□□ 0.42
SPIRE1-202ENST00000409402 TSPEAR-AS2P59090 65 aa17.66■□□□□ 0.42
SPIRE1-202ENST00000409402 Q9BRP9 147 aa17.66■□□□□ 0.42
SPIRE1-202ENST00000409402 NDUFC1O43677 76 aa17.66■□□□□ 0.42
SPIRE1-202ENST00000409402 MPLKIPQ8TAP9 179 aa17.66■□□□□ 0.42
SPIRE1-202ENST00000409402 EP400Q96L91 3159 aa17.66■□□□□ 0.42
SPIRE1-202ENST00000409402 MDFIQ99750 246 aa17.65■□□□□ 0.42
SPIRE1-202ENST00000409402 SERP1Q9Y6X1 66 aa17.64■□□□□ 0.41
SPIRE1-202ENST00000409402 ESRGQ1W209 222 aa17.63■□□□□ 0.41
SPIRE1-202ENST00000409402 Q6ZRU5 148 aa17.63■□□□□ 0.41
SPIRE1-202ENST00000409402 SERP2Q8N6R1 65 aa17.63■□□□□ 0.41
SPIRE1-202ENST00000409402 BRK1Q8WUW1 75 aa17.62■□□□□ 0.41
SPIRE1-202ENST00000409402 FAM30AQ9NZY2 134 aa17.62■□□□□ 0.41
SPIRE1-202ENST00000409402 C11orf72Q8NBR9 251 aa17.62■□□□□ 0.41
SPIRE1-202ENST00000409402 LINC00310P59036 64 aa17.62■□□□□ 0.41
SPIRE1-202ENST00000409402 SPTSSBQ8NFR3 76 aa17.61■□□□□ 0.41
SPIRE1-202ENST00000409402 ABCA12Q86UK0 2595 aa17.61■□□□□ 0.41
SPIRE1-202ENST00000409402 ATP5EP56381 51 aaPredicted RBP17.61■□□□□ 0.41
SPIRE1-202ENST00000409402 KRTAP24-1Q3LI83 254 aa17.61■□□□□ 0.41
SPIRE1-202ENST00000409402 ADAMTSL4-AS1Q5T5F5 129 aa17.61■□□□□ 0.41
SPIRE1-202ENST00000409402 SNURFQ9Y675 71 aa17.61■□□□□ 0.41
SPIRE1-202ENST00000409402 A0A087WYN8 130 aa17.6■□□□□ 0.41
SPIRE1-202ENST00000409402 EML5Q05BV3 1969 aa17.6■□□□□ 0.41
SPIRE1-202ENST00000409402 Q6ZVQ6 151 aa17.59■□□□□ 0.41
SPIRE1-202ENST00000409402 IGHV6-1A0A0B4J1U7 121 aa17.58■□□□□ 0.41
SPIRE1-202ENST00000409402 ZFYVE26Q68DK2 2539 aa17.58■□□□□ 0.41
SPIRE1-202ENST00000409402 V9GYY9 64 aa17.57■□□□□ 0.4
SPIRE1-202ENST00000409402 COL4A2P08572 1712 aa17.57■□□□□ 0.4
SPIRE1-202ENST00000409402 SVIPQ8NHG7 77 aa17.56■□□□□ 0.4
SPIRE1-202ENST00000409402 LRRK2Q5S007 2527 aa17.56■□□□□ 0.4
SPIRE1-202ENST00000409402 PRR4Q16378 134 aa17.52■□□□□ 0.4
SPIRE1-202ENST00000409402 KIF25-AS1Q9Y6Z4 181 aa17.52■□□□□ 0.39
SPIRE1-202ENST00000409402 ANKRD11Q6UB99 2663 aaPredicted RBP17.51■□□□□ 0.39
SPIRE1-202ENST00000409402 C22orf24Q9Y442 160 aa17.5■□□□□ 0.39
SPIRE1-202ENST00000409402 LIMD2Q9BT23 127 aa17.5■□□□□ 0.39
SPIRE1-202ENST00000409402 A0A096LNJ9 63 aa17.5■□□□□ 0.39
SPIRE1-202ENST00000409402 SBSPONQ8IVN8 264 aa17.5■□□□□ 0.39
SPIRE1-202ENST00000409402 CEP295Q9C0D2 2601 aa17.49■□□□□ 0.39
SPIRE1-202ENST00000409402 PRLHP81277 87 aa17.49■□□□□ 0.39
SPIRE1-202ENST00000409402 A0A087WSZ3 146 aa17.48■□□□□ 0.39
SPIRE1-202ENST00000409402 H3BNG1 76 aa17.47■□□□□ 0.39
SPIRE1-202ENST00000409402 FAM240AA0A1B0GVK7 77 aa17.46■□□□□ 0.39
SPIRE1-202ENST00000409402 USP9XQ93008 2570 aaPredicted RBP17.46■□□□□ 0.38
SPIRE1-202ENST00000409402 FAM19A4Q96LR4 140 aa17.45■□□□□ 0.38
SPIRE1-202ENST00000409402 LINC00575Q6W349 94 aa17.45■□□□□ 0.38
SPIRE1-202ENST00000409402 AGRNO00468 2067 aa17.44■□□□□ 0.38
SPIRE1-202ENST00000409402 SMCR5Q8TEV8 140 aa17.43■□□□□ 0.38
SPIRE1-202ENST00000409402 COX7CP15954 63 aa17.43■□□□□ 0.38
SPIRE1-202ENST00000409402 TLN2Q9Y4G6 2542 aa17.43■□□□□ 0.38
SPIRE1-202ENST00000409402 FN1P02751 2386 aaKnown RBP17.43■□□□□ 0.38
SPIRE1-202ENST00000409402 X6R8D5 127 aa17.42■□□□□ 0.38
SPIRE1-202ENST00000409402 LINC00208Q96KT6 92 aa17.42■□□□□ 0.38
SPIRE1-202ENST00000409402 LINC01547P58512 204 aaPredicted RBP17.42■□□□□ 0.38
SPIRE1-202ENST00000409402 RETNLBQ9BQ08 111 aa17.41■□□□□ 0.38
SPIRE1-202ENST00000409402 TET2Q6N021 2002 aaPredicted RBP17.41■□□□□ 0.38
SPIRE1-202ENST00000409402 CHD8Q9HCK8 2581 aa17.39■□□□□ 0.37
SPIRE1-202ENST00000409402 XGP55808 180 aa17.39■□□□□ 0.37
SPIRE1-202ENST00000409402 ZNF462Q96JM2 2506 aa17.39■□□□□ 0.37
SPIRE1-202ENST00000409402 A8MTW9 85 aa17.38■□□□□ 0.37
SPIRE1-202ENST00000409402 WDR87Q6ZQQ6 2873 aa17.37■□□□□ 0.37
SPIRE1-202ENST00000409402 TRAV7A0A075B6U4 112 aa17.36■□□□□ 0.37
SPIRE1-202ENST00000409402 IGHV3OR16-9A0A0B4J2B5 98 aa17.36■□□□□ 0.37
SPIRE1-202ENST00000409402 IGLV5-39A0A0G2JS06 123 aa17.36■□□□□ 0.37
SPIRE1-202ENST00000409402 A6NED7 52 aa17.34■□□□□ 0.37
SPIRE1-202ENST00000409402 LINC00337Q8N6G1 96 aa17.34■□□□□ 0.37
SPIRE1-202ENST00000409402 LINC00315P59091 139 aa17.33■□□□□ 0.36
SPIRE1-202ENST00000409402 DEFB116Q30KQ4 102 aa17.32■□□□□ 0.36
SPIRE1-202ENST00000409402 NBDYA0A0U1RRE5 68 aa17.3■□□□□ 0.36
SPIRE1-202ENST00000409402 LINC00167Q96N53 147 aa17.29■□□□□ 0.36
SPIRE1-202ENST00000409402 LINC01546A6NGU7 62 aa17.29■□□□□ 0.36
SPIRE1-202ENST00000409402 Q6Q795 121 aa17.29■□□□□ 0.36
SPIRE1-202ENST00000409402 C6orf48Q9UBA6 75 aa17.28■□□□□ 0.36
SPIRE1-202ENST00000409402 Q8N3U1 123 aa17.28■□□□□ 0.36
SPIRE1-202ENST00000409402 FAM229AH3BQW9 127 aa17.28■□□□□ 0.36
SPIRE1-202ENST00000409402 TRBV7-6A0A0J9YX20 115 aa17.27■□□□□ 0.36
SPIRE1-202ENST00000409402 A0A087WVE0 104 aa17.27■□□□□ 0.36
SPIRE1-202ENST00000409402 Q8NAQ8 132 aa17.26■□□□□ 0.35
SPIRE1-202ENST00000409402 WWC2-AS2Q96NR7 200 aa17.26■□□□□ 0.35
SPIRE1-202ENST00000409402 RTL8CO15255 209 aa17.25■□□□□ 0.35
SPIRE1-202ENST00000409402 SRCAPQ6ZRS2 3230 aa17.25■□□□□ 0.35
SPIRE1-202ENST00000409402 PTPRBP23467 1997 aa17.24■□□□□ 0.35
SPIRE1-202ENST00000409402 SPTBN4Q9H254 2564 aa17.24■□□□□ 0.35
SPIRE1-202ENST00000409402 USP9YO00507 2555 aaPredicted RBP17.24■□□□□ 0.35
SPIRE1-202ENST00000409402 CCDC179H3BU77 68 aa17.23■□□□□ 0.35
SPIRE1-202ENST00000409402 PCOTHQ58A44 107 aa17.23■□□□□ 0.35
SPIRE1-202ENST00000409402 HCG22E2RYF7 251 aa17.22■□□□□ 0.35
SPIRE1-202ENST00000409402 KIAA0087Q14695 138 aa17.22■□□□□ 0.35
SPIRE1-202ENST00000409402 H0Y9P7 68 aa17.22■□□□□ 0.35
SPIRE1-202ENST00000409402 LINC00588Q9Y4M8 146 aa17.21■□□□□ 0.35
SPIRE1-202ENST00000409402 C16orf90A8MZG2 172 aa17.19■□□□□ 0.34
SPIRE1-202ENST00000409402 MOBPQ13875 183 aa17.19■□□□□ 0.34
SPIRE1-202ENST00000409402 SPACA4Q8TDM5 124 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms