RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 MIR7-3HGQ8N6C7 128 aa2.79□□□□□ -1.96
RGPD4-201ENST00000408999 IL17DQ8TAD2 202 aa2.79□□□□□ -1.96
RGPD4-201ENST00000408999 CHCHD10Q8WYQ3 142 aaPredicted RBP2.79□□□□□ -1.96
RGPD4-201ENST00000408999 C11orf21Q9P2W6 132 aa2.79□□□□□ -1.96
RGPD4-201ENST00000408999 TNXBP22105 4242 aa2.79□□□□□ -1.96
RGPD4-201ENST00000408999 RNASE3P12724 160 aaKnown RBP2.79□□□□□ -1.96
RGPD4-201ENST00000408999 HAMPP81172 84 aa2.79□□□□□ -1.96
RGPD4-201ENST00000408999 CLEC2BQ92478 149 aa2.79□□□□□ -1.96
RGPD4-201ENST00000408999 KLLNB2CW77 178 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 UBE2AP49459 152 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 CRIP2P52943 208 aaPredicted RBP2.78□□□□□ -1.96
RGPD4-201ENST00000408999 MIAQ16674 131 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 IGLV4-3A0A075B6K6 122 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 TRBV6-4A0A1B0GX49 114 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 MRPS12O15235 138 aaKnown RBP2.78□□□□□ -1.96
RGPD4-201ENST00000408999 PRM2P04554 102 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 C9orf85Q96MD7 179 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 BBC3Q96PG8 261 aaPredicted RBP2.78□□□□□ -1.96
RGPD4-201ENST00000408999 A0A0J9YXY3 114 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 LOC100131303A0A0U1RQF7 123 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 A8MU10 97 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 TSHBP01222 138 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 C16orf95Q9H693 158 aa2.78□□□□□ -1.96
RGPD4-201ENST00000408999 TRBV6-8A0A0A6YYG3 113 aa2.78□□□□□ -1.97
RGPD4-201ENST00000408999 H0YGX0 51 aa2.78□□□□□ -1.97
RGPD4-201ENST00000408999 hADV29S1A0JD25 119 aa2.77□□□□□ -1.97
RGPD4-201ENST00000408999 ANKRD29Q8N6D5 301 aa2.77□□□□□ -1.97
RGPD4-201ENST00000408999 NRACQ8N912 160 aa2.77□□□□□ -1.97
RGPD4-201ENST00000408999 SPANXCQ9NY87 97 aa2.77□□□□□ -1.97
RGPD4-201ENST00000408999 DIRC1Q969H9 104 aa2.77□□□□□ -1.97
RGPD4-201ENST00000408999 ZNF22P17026 224 aaPredicted RBP2.77□□□□□ -1.97
RGPD4-201ENST00000408999 C14orf177Q52M58 125 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 RNF183Q96D59 192 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 TRAV10A0A0B4J240 114 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 A0A0J9YWU9 116 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 LECT2O14960 151 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 NDUFS5O43920 106 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 PRB2P02812 416 aaPredicted RBP2.76□□□□□ -1.97
RGPD4-201ENST00000408999 MRGPRG-AS1Q2M3A8 158 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 LINC01620Q4KN68 170 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 KIR2DL5BQ8NHK3 375 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 UBE2D4Q9Y2X8 147 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 IGKV2-24A0A0C4DH68 120 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 TRBV6-5A0A0K0K1A5 114 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 A0A0B4J2C4 111 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 TRBV27A0A0K0K1C4 114 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 TRACP01848 142 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 COX7BP24311 80 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 FUSP35637 526 aaKnown RBP eCLIP2.76□□□□□ -1.97
RGPD4-201ENST00000408999 C9orf153Q5TBE3 101 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 CDKN2A-AS1Q9UH64 79 aa2.76□□□□□ -1.97
RGPD4-201ENST00000408999 IGHV4-30-4P0DP06 118 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 NANOS2P60321 138 aaKnown RBP2.75□□□□□ -1.97
RGPD4-201ENST00000408999 TRBV10-2A0A0K0K1G8 114 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 ACYP1P07311 99 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 CRYBA4P53673 196 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 ODF3L2Q3SX64 289 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 OXLD1Q5BKU9 147 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 B9D2Q9BPU9 175 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 RETNQ9HD89 108 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 TCL1BO95988 128 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 MAPKAPK5-AS1Q8N8E1 139 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 CITED1Q99966 193 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 PYGO1Q9Y3Y4 419 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 KPRPQ5T749 579 aaPredicted RBP2.75□□□□□ -1.97
RGPD4-201ENST00000408999 IGKV2D-26A0A0A0MRZ7 120 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 A8MZ25 164 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 PIK3CD-AS1Q5SR53 167 aa2.75□□□□□ -1.97
RGPD4-201ENST00000408999 FAM19A5Q7Z5A7 132 aaPredicted RBP2.75□□□□□ -1.97
RGPD4-201ENST00000408999 SPANXB1Q9NS25 103 aaPredicted RBP2.75□□□□□ -1.97
RGPD4-201ENST00000408999 IGLV1-51P01701 117 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 UBE2D3P61077 147 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 UBE2D2P62837 147 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 DNAH5Q8TE73 4624 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 UBE2D1P51668 147 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 LELP1Q5T871 98 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 WFDC2Q14508 124 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 LINC00308Q8TCZ7 52 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 CNFNQ9BYD5 112 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 IGLV2-18A0A075B6J9 118 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 LINC00959A0A1B0GUT2 108 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 IBA57-AS1B1ANH7 110 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 TMEM256-PLSCR3K7ERE1 68 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 TEN1Q86WV5 123 aa2.74□□□□□ -1.97
RGPD4-201ENST00000408999 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.73□□□□□ -1.97
RGPD4-201ENST00000408999 IGKV3D-7A0A0C4DH55 119 aa2.73□□□□□ -1.97
RGPD4-201ENST00000408999 MRPS36P82909 103 aaKnown RBP2.73□□□□□ -1.97
RGPD4-201ENST00000408999 FAM104AQ969W3 186 aa2.73□□□□□ -1.97
RGPD4-201ENST00000408999 M0R2N4 97 aa2.73□□□□□ -1.97
RGPD4-201ENST00000408999 FOXI1Q12951 378 aa2.73□□□□□ -1.97
RGPD4-201ENST00000408999 CD164L2Q6UWJ8 174 aa2.73□□□□□ -1.97
RGPD4-201ENST00000408999 FAM19A1Q7Z5A9 133 aa2.73□□□□□ -1.97
RGPD4-201ENST00000408999 C14orf132Q9NPU4 83 aa2.73□□□□□ -1.97
RGPD4-201ENST00000408999 JMJD7-PLA2G4BH0Y9G9 81 aa2.73□□□□□ -1.97
RGPD4-201ENST00000408999 POLR2KP53803 58 aaKnown RBP2.73□□□□□ -1.97
RGPD4-201ENST00000408999 RBM3P98179 157 aaKnown RBP2.73□□□□□ -1.97
RGPD4-201ENST00000408999 EPPK1P58107 5090 aaKnown RBP2.73□□□□□ -1.97
RGPD4-201ENST00000408999 Q8N2B8 174 aa2.73□□□□□ -1.97
RGPD4-201ENST00000408999 CHCHD7Q9BUK0 85 aa2.73□□□□□ -1.97
RGPD4-201ENST00000408999 H3BT86 120 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms