RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TOMM7Q9P0U1 55 aa6.71□□□□□ -1.34
SPTLC1P3-201ENST00000403408 D6R8Y8 96 aa6.7□□□□□ -1.34
SPTLC1P3-201ENST00000403408 CKS2P33552 79 aa6.7□□□□□ -1.34
SPTLC1P3-201ENST00000403408 PYGO1Q9Y3Y4 419 aa6.7□□□□□ -1.34
SPTLC1P3-201ENST00000403408 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
SPTLC1P3-201ENST00000403408 LINC00862A6NCI5 91 aa6.69□□□□□ -1.34
SPTLC1P3-201ENST00000403408 GHRHP01286 108 aa6.69□□□□□ -1.34
SPTLC1P3-201ENST00000403408 IGKV2D-26A0A0A0MRZ7 120 aa6.68□□□□□ -1.34
SPTLC1P3-201ENST00000403408 MT1HP80294 61 aa6.68□□□□□ -1.34
SPTLC1P3-201ENST00000403408 PRLHP81277 87 aa6.68□□□□□ -1.34
SPTLC1P3-201ENST00000403408 PNRC1Q12796 327 aaPredicted RBP6.68□□□□□ -1.34
SPTLC1P3-201ENST00000403408 RGS21Q2M5E4 152 aa6.68□□□□□ -1.34
SPTLC1P3-201ENST00000403408 Q8IZM0 81 aa6.68□□□□□ -1.34
SPTLC1P3-201ENST00000403408 TMEM141Q96I45 108 aa6.68□□□□□ -1.34
SPTLC1P3-201ENST00000403408 SMIM7Q9BQ49 75 aa6.68□□□□□ -1.34
SPTLC1P3-201ENST00000403408 EIF5A2Q9GZV4 153 aaKnown RBP6.68□□□□□ -1.34
SPTLC1P3-201ENST00000403408 UBE2AP49459 152 aa6.67□□□□□ -1.34
SPTLC1P3-201ENST00000403408 CKS1BP61024 79 aa6.67□□□□□ -1.34
SPTLC1P3-201ENST00000403408 CTAG1AP78358 180 aa6.67□□□□□ -1.34
SPTLC1P3-201ENST00000403408 C6orf226Q5I0X4 101 aa6.67□□□□□ -1.34
SPTLC1P3-201ENST00000403408 Q6ZN92 141 aa6.67□□□□□ -1.34
SPTLC1P3-201ENST00000403408 AMELXQ99217 191 aa6.67□□□□□ -1.34
SPTLC1P3-201ENST00000403408 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
SPTLC1P3-201ENST00000403408 PRSS2P07478 247 aa6.66□□□□□ -1.34
SPTLC1P3-201ENST00000403408 IFI27P40305 119 aaPredicted RBP6.66□□□□□ -1.34
SPTLC1P3-201ENST00000403408 FAM74A3Q4VXF1 159 aa6.66□□□□□ -1.34
SPTLC1P3-201ENST00000403408 ALKBH7Q9BT30 221 aaPredicted RBP6.66□□□□□ -1.34
SPTLC1P3-201ENST00000403408 NAT8BQ9UHF3 227 aa6.66□□□□□ -1.34
SPTLC1P3-201ENST00000403408 SMIM27A0A1W2PRY6 76 aa6.65□□□□□ -1.34
SPTLC1P3-201ENST00000403408 F8VRH5 84 aa6.65□□□□□ -1.34
SPTLC1P3-201ENST00000403408 SRP19P09132 144 aaKnown RBP6.65□□□□□ -1.34
SPTLC1P3-201ENST00000403408 FP248Q71RG6 208 aaPredicted RBP6.65□□□□□ -1.34
SPTLC1P3-201ENST00000403408 FAM19A3Q7Z5A8 133 aa6.65□□□□□ -1.34
SPTLC1P3-201ENST00000403408 SLC51BQ86UW2 128 aa6.65□□□□□ -1.34
SPTLC1P3-201ENST00000403408 PLEKHB2Q96CS7 222 aa6.65□□□□□ -1.34
SPTLC1P3-201ENST00000403408 CDKN2A-AS1Q9UH64 79 aa6.65□□□□□ -1.34
SPTLC1P3-201ENST00000403408 IGKV2-28A0A075B6P5 120 aa6.64□□□□□ -1.35
SPTLC1P3-201ENST00000403408 A0A1B0GXF2 115 aa6.64□□□□□ -1.35
SPTLC1P3-201ENST00000403408 TMEM238C9JI98 176 aa6.64□□□□□ -1.35
SPTLC1P3-201ENST00000403408 IGKV2D-28P01615 120 aa6.64□□□□□ -1.35
SPTLC1P3-201ENST00000403408 C2orf66Q6UXQ4 117 aa6.64□□□□□ -1.35
SPTLC1P3-201ENST00000403408 TEX43Q6ZNM6 134 aa6.64□□□□□ -1.35
SPTLC1P3-201ENST00000403408 LINC00337Q8N6G1 96 aa6.64□□□□□ -1.35
SPTLC1P3-201ENST00000403408 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
SPTLC1P3-201ENST00000403408 RPL23P62829 140 aaKnown RBP6.63□□□□□ -1.35
SPTLC1P3-201ENST00000403408 MRPL54Q6P161 138 aaKnown RBP6.63□□□□□ -1.35
SPTLC1P3-201ENST00000403408 SEC61BP60468 96 aaKnown RBP6.62□□□□□ -1.35
SPTLC1P3-201ENST00000403408 Q8NDZ9 215 aa6.62□□□□□ -1.35
SPTLC1P3-201ENST00000403408 IGIPA6NJ69 53 aa6.61□□□□□ -1.35
SPTLC1P3-201ENST00000403408 C9JQL5 133 aa6.61□□□□□ -1.35
SPTLC1P3-201ENST00000403408 KRTAP10-6P60371 365 aaPredicted RBP6.61□□□□□ -1.35
SPTLC1P3-201ENST00000403408 ALKAL2Q6UX46 152 aa6.61□□□□□ -1.35
SPTLC1P3-201ENST00000403408 DAND5Q8N907 189 aa6.61□□□□□ -1.35
SPTLC1P3-201ENST00000403408 LOC389332A0A1B0GUA5 103 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 PRSS47A8MTI9 375 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 SMIM1B2RUZ4 78 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 M0R378 163 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 RAB5AP20339 215 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 RAB5BP61020 215 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 TMEM136Q6ZRR5 245 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 FAM19A1Q7Z5A9 133 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 C2orf88Q9BSF0 95 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 TMEM126AQ9H061 195 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 VCX2Q9H322 139 aa6.6□□□□□ -1.35
SPTLC1P3-201ENST00000403408 A0A1B0GW15 77 aa6.59□□□□□ -1.35
SPTLC1P3-201ENST00000403408 KRTAP9-7A8MTY7 169 aa6.59□□□□□ -1.35
SPTLC1P3-201ENST00000403408 SPAG11AQ6PDA7 123 aa6.59□□□□□ -1.35
SPTLC1P3-201ENST00000403408 PRELID3AQ96N28 172 aa6.59□□□□□ -1.35
SPTLC1P3-201ENST00000403408 PPBPP02775 128 aa6.58□□□□□ -1.36
SPTLC1P3-201ENST00000403408 VPREB1P12018 145 aa6.58□□□□□ -1.36
SPTLC1P3-201ENST00000403408 BLOC1S1P78537 153 aa6.58□□□□□ -1.36
SPTLC1P3-201ENST00000403408 ORMDL3Q8N138 153 aa6.58□□□□□ -1.36
SPTLC1P3-201ENST00000403408 NKAPP1Q8N9T2 125 aa6.58□□□□□ -1.36
SPTLC1P3-201ENST00000403408 Q8NBF4 154 aa6.58□□□□□ -1.36
SPTLC1P3-201ENST00000403408 SPRR4Q96PI1 79 aa6.58□□□□□ -1.36
SPTLC1P3-201ENST00000403408 USH2AO75445 5202 aa6.58□□□□□ -1.36
SPTLC1P3-201ENST00000403408 ADIRFQ15847 76 aa6.57□□□□□ -1.36
SPTLC1P3-201ENST00000403408 TCTE3Q8IZS6 198 aa6.57□□□□□ -1.36
SPTLC1P3-201ENST00000403408 CYSLTR1Q9Y271 337 aa6.57□□□□□ -1.36
SPTLC1P3-201ENST00000403408 CXCL5P42830 114 aa6.56□□□□□ -1.36
SPTLC1P3-201ENST00000403408 HERVK_113P63121 156 aa6.56□□□□□ -1.36
SPTLC1P3-201ENST00000403408 CBLN2Q8IUK8 224 aa6.56□□□□□ -1.36
SPTLC1P3-201ENST00000403408 COX7B2Q8TF08 81 aa6.56□□□□□ -1.36
SPTLC1P3-201ENST00000403408 KRTAP4-9Q9BYQ8 210 aa6.56□□□□□ -1.36
SPTLC1P3-201ENST00000403408 F8W036 122 aa6.55□□□□□ -1.36
SPTLC1P3-201ENST00000403408 Q8N8P6 123 aa6.55□□□□□ -1.36
SPTLC1P3-201ENST00000403408 HIGD2AQ9BW72 106 aa6.54□□□□□ -1.36
SPTLC1P3-201ENST00000403408 IGLV5-45A0A087WSX0 123 aa6.53□□□□□ -1.36
SPTLC1P3-201ENST00000403408 NPSP0C0P6 89 aa6.53□□□□□ -1.36
SPTLC1P3-201ENST00000403408 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
SPTLC1P3-201ENST00000403408 PDZD11Q5EBL8 140 aa6.53□□□□□ -1.36
SPTLC1P3-201ENST00000403408 Q8N377 158 aa6.53□□□□□ -1.36
SPTLC1P3-201ENST00000403408 GEMIN7Q9H840 131 aaKnown RBP6.53□□□□□ -1.36
SPTLC1P3-201ENST00000403408 SPINK8P0C7L1 97 aa6.52□□□□□ -1.37
SPTLC1P3-201ENST00000403408 ADCYAP1P18509 176 aa6.52□□□□□ -1.37
SPTLC1P3-201ENST00000403408 MAP1LC3AQ9H492 121 aa6.52□□□□□ -1.37
SPTLC1P3-201ENST00000403408 NAT8Q9UHE5 227 aa6.52□□□□□ -1.37
SPTLC1P3-201ENST00000403408 S100A8P05109 93 aa6.51□□□□□ -1.37
SPTLC1P3-201ENST00000403408 GNB1LQ9BYB4 327 aa6.51□□□□□ -1.37
SPTLC1P3-201ENST00000403408 SND1-IT1Q9HBX3 110 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 630.8 ms