RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 TOMM7Q9P0U1 55 aa9.73□□□□□ -0.85
ATG4B-203ENST00000400772 UBR4Q5T4S7 5183 aa9.73□□□□□ -0.85
ATG4B-203ENST00000400772 MT-ND6P03923 174 aa9.72□□□□□ -0.85
ATG4B-203ENST00000400772 SEC11AP67812 179 aa9.72□□□□□ -0.85
ATG4B-203ENST00000400772 C9orf129Q5T035 196 aaKnown RBP9.72□□□□□ -0.85
ATG4B-203ENST00000400772 FAM19A5Q7Z5A7 132 aaPredicted RBP9.72□□□□□ -0.85
ATG4B-203ENST00000400772 PRSS2P07478 247 aa9.71□□□□□ -0.86
ATG4B-203ENST00000400772 KRTAP10-8P60410 259 aa9.71□□□□□ -0.86
ATG4B-203ENST00000400772 C6orf226Q5I0X4 101 aa9.71□□□□□ -0.86
ATG4B-203ENST00000400772 C1orf137Q5JT78 98 aa9.71□□□□□ -0.86
ATG4B-203ENST00000400772 REG3GQ6UW15 175 aa9.71□□□□□ -0.86
ATG4B-203ENST00000400772 GEMIN7Q9H840 131 aaKnown RBP9.71□□□□□ -0.86
ATG4B-203ENST00000400772 CKS1BP61024 79 aa9.7□□□□□ -0.86
ATG4B-203ENST00000400772 ODF1Q14990 250 aa9.7□□□□□ -0.86
ATG4B-203ENST00000400772 CST9LQ9H4G1 147 aa9.7□□□□□ -0.86
ATG4B-203ENST00000400772 TINCRA0A1B0GVN0 87 aa9.69□□□□□ -0.86
ATG4B-203ENST00000400772 LINC01549A6NIU2 74 aa9.69□□□□□ -0.86
ATG4B-203ENST00000400772 FA2HQ7L5A8 372 aa9.69□□□□□ -0.86
ATG4B-203ENST00000400772 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
ATG4B-203ENST00000400772 IGLV5-45A0A087WSX0 123 aa9.68□□□□□ -0.86
ATG4B-203ENST00000400772 SMIM1B2RUZ4 78 aa9.68□□□□□ -0.86
ATG4B-203ENST00000400772 LINC00469Q8N7U9 141 aa9.68□□□□□ -0.86
ATG4B-203ENST00000400772 A0A096LNJ9 63 aa9.67□□□□□ -0.86
ATG4B-203ENST00000400772 M0QXV9 152 aa9.67□□□□□ -0.86
ATG4B-203ENST00000400772 APOC3P02656 99 aa9.67□□□□□ -0.86
ATG4B-203ENST00000400772 IGLV7-43P04211 117 aa9.67□□□□□ -0.86
ATG4B-203ENST00000400772 PMVKQ15126 192 aa9.67□□□□□ -0.86
ATG4B-203ENST00000400772 SMCO4Q9NRQ5 59 aa9.67□□□□□ -0.86
ATG4B-203ENST00000400772 TRAPPC1Q9Y5R8 145 aa9.67□□□□□ -0.86
ATG4B-203ENST00000400772 F8VRH5 84 aa9.66□□□□□ -0.86
ATG4B-203ENST00000400772 PDZD11Q5EBL8 140 aa9.66□□□□□ -0.86
ATG4B-203ENST00000400772 C18orf32Q8TCD1 76 aa9.65□□□□□ -0.86
ATG4B-203ENST00000400772 LINC00614P0C842 121 aa9.64□□□□□ -0.87
ATG4B-203ENST00000400772 COX7B2Q8TF08 81 aa9.64□□□□□ -0.87
ATG4B-203ENST00000400772 XAGE1AQ9HD64 81 aa9.64□□□□□ -0.87
ATG4B-203ENST00000400772 SPINK8P0C7L1 97 aa9.63□□□□□ -0.87
ATG4B-203ENST00000400772 CXCL5P42830 114 aa9.63□□□□□ -0.87
ATG4B-203ENST00000400772 SVBPQ8N300 66 aa9.63□□□□□ -0.87
ATG4B-203ENST00000400772 SNAPINO95295 136 aa9.62□□□□□ -0.87
ATG4B-203ENST00000400772 UBE2BP63146 152 aa9.62□□□□□ -0.87
ATG4B-203ENST00000400772 YPEL4Q96NS1 127 aa9.62□□□□□ -0.87
ATG4B-203ENST00000400772 C22orf24Q9Y442 160 aa9.62□□□□□ -0.87
ATG4B-203ENST00000400772 LRP2P98164 4655 aa9.61□□□□□ -0.87
ATG4B-203ENST00000400772 IGLC3P0DOY3 106 aa9.61□□□□□ -0.87
ATG4B-203ENST00000400772 PMCHL1Q16048 86 aa9.61□□□□□ -0.87
ATG4B-203ENST00000400772 NDUFA5Q16718 116 aa9.6□□□□□ -0.87
ATG4B-203ENST00000400772 DIRC1Q969H9 104 aa9.6□□□□□ -0.87
ATG4B-203ENST00000400772 H0Y9J4 135 aa9.59□□□□□ -0.87
ATG4B-203ENST00000400772 HBDP02042 147 aa9.59□□□□□ -0.87
ATG4B-203ENST00000400772 H3BRM9 83 aa9.58□□□□□ -0.88
ATG4B-203ENST00000400772 NDUFA6P56556 154 aa9.58□□□□□ -0.88
ATG4B-203ENST00000400772 IGLV5-39A0A0G2JS06 123 aa9.57□□□□□ -0.88
ATG4B-203ENST00000400772 ZNF22P17026 224 aaPredicted RBP9.57□□□□□ -0.88
ATG4B-203ENST00000400772 KRTAP1-4P0C5Y4 121 aa9.56□□□□□ -0.88
ATG4B-203ENST00000400772 RAB5BP61020 215 aa9.56□□□□□ -0.88
ATG4B-203ENST00000400772 LBHQ53QV2 105 aaPredicted RBP9.56□□□□□ -0.88
ATG4B-203ENST00000400772 PRR26Q8N8Z3 221 aa9.56□□□□□ -0.88
ATG4B-203ENST00000400772 TP73-AS1Q9UF72 201 aa9.56□□□□□ -0.88
ATG4B-203ENST00000400772 MRPL55Q7Z7F7 128 aaKnown RBP9.55□□□□□ -0.88
ATG4B-203ENST00000400772 ATP5LO75964 103 aa9.54□□□□□ -0.88
ATG4B-203ENST00000400772 BAGE3Q86Y29 109 aa9.54□□□□□ -0.88
ATG4B-203ENST00000400772 C11orf86A6NJI1 115 aa9.53□□□□□ -0.88
ATG4B-203ENST00000400772 NUPR1O60356 82 aa9.53□□□□□ -0.88
ATG4B-203ENST00000400772 ZNF861PO60384 105 aa9.53□□□□□ -0.88
ATG4B-203ENST00000400772 LINC00167Q96N53 147 aa9.52□□□□□ -0.89
ATG4B-203ENST00000400772 IGLV5-37A0A075B6J1 123 aa9.51□□□□□ -0.89
ATG4B-203ENST00000400772 CBLN2Q8IUK8 224 aa9.51□□□□□ -0.89
ATG4B-203ENST00000400772 CHCHD1Q96BP2 118 aaKnown RBP9.51□□□□□ -0.89
ATG4B-203ENST00000400772 RPL37AP8A6NKH3 93 aa9.5□□□□□ -0.89
ATG4B-203ENST00000400772 PFN2P35080 140 aa9.5□□□□□ -0.89
ATG4B-203ENST00000400772 IGLV1-50A0A075B6I6 118 aa9.49□□□□□ -0.89
ATG4B-203ENST00000400772 TMEM170BQ5T4T1 132 aa9.49□□□□□ -0.89
ATG4B-203ENST00000400772 CHTOPQ9Y3Y2 248 aaKnown RBP9.49□□□□□ -0.89
ATG4B-203ENST00000400772 GAGE10A6NGK3 116 aa9.48□□□□□ -0.89
ATG4B-203ENST00000400772 BCE1O60756 84 aa9.48□□□□□ -0.89
ATG4B-203ENST00000400772 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
ATG4B-203ENST00000400772 TRAV12-1A0A0B4J245 112 aa9.47□□□□□ -0.89
ATG4B-203ENST00000400772 SCO1O75880 301 aa9.47□□□□□ -0.89
ATG4B-203ENST00000400772 IFI27L1Q96BM0 104 aa9.47□□□□□ -0.89
ATG4B-203ENST00000400772 ZNF625Q96I27 306 aaPredicted RBP9.47□□□□□ -0.89
ATG4B-203ENST00000400772 LPAP08519 4548 aa9.47□□□□□ -0.89
ATG4B-203ENST00000400772 SND1-IT1Q9HBX3 110 aa9.46□□□□□ -0.9
ATG4B-203ENST00000400772 TMEM223A0PJW6 202 aa9.45□□□□□ -0.9
ATG4B-203ENST00000400772 TRGC2P03986 189 aa9.45□□□□□ -0.9
ATG4B-203ENST00000400772 COX17Q14061 63 aa9.45□□□□□ -0.9
ATG4B-203ENST00000400772 FAM19A2Q8N3H0 131 aa9.45□□□□□ -0.9
ATG4B-203ENST00000400772 NKAPP1Q8N9T2 125 aa9.45□□□□□ -0.9
ATG4B-203ENST00000400772 VPREB1P12018 145 aa9.44□□□□□ -0.9
ATG4B-203ENST00000400772 SLC7A5P1Q8MH63 180 aa9.44□□□□□ -0.9
ATG4B-203ENST00000400772 Q8NDZ9 215 aa9.44□□□□□ -0.9
ATG4B-203ENST00000400772 RPL28P46779 137 aaKnown RBP9.43□□□□□ -0.9
ATG4B-203ENST00000400772 LINC00310P59036 64 aa9.43□□□□□ -0.9
ATG4B-203ENST00000400772 KRTAP13-1Q8IUC0 172 aa9.43□□□□□ -0.9
ATG4B-203ENST00000400772 RNF213Q63HN8 5207 aa9.43□□□□□ -0.9
ATG4B-203ENST00000400772 IGKV2-28A0A075B6P5 120 aa9.42□□□□□ -0.9
ATG4B-203ENST00000400772 HSBP1O75506 76 aa9.42□□□□□ -0.9
ATG4B-203ENST00000400772 IGKV2D-28P01615 120 aa9.42□□□□□ -0.9
ATG4B-203ENST00000400772 SFTA2Q6UW10 78 aa9.42□□□□□ -0.9
ATG4B-203ENST00000400772 RPL13AP40429 203 aaKnown RBP9.41□□□□□ -0.9
ATG4B-203ENST00000400772 A0A087X002 238 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms