RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 Q6ZSV7 163 aa7.01□□□□□ -1.29
CSMD1-202ENST00000400186 PRM2P04554 102 aa7.01□□□□□ -1.29
CSMD1-202ENST00000400186 UBE2D2P62837 147 aa7.01□□□□□ -1.29
CSMD1-202ENST00000400186 PSPHP1O15172 72 aa7.01□□□□□ -1.29
CSMD1-202ENST00000400186 CYSRT1A8MQ03 144 aa7□□□□□ -1.29
CSMD1-202ENST00000400186 C1orf137Q5JT78 98 aa7□□□□□ -1.29
CSMD1-202ENST00000400186 IGIPA6NJ69 53 aa7□□□□□ -1.29
CSMD1-202ENST00000400186 CDC42SE2Q9NRR3 84 aa7□□□□□ -1.29
CSMD1-202ENST00000400186 IGLV2-18A0A075B6J9 118 aa7□□□□□ -1.29
CSMD1-202ENST00000400186 C9orf116Q5BN46 136 aaPredicted RBP6.99□□□□□ -1.29
CSMD1-202ENST00000400186 LINC00208Q96KT6 92 aa6.99□□□□□ -1.29
CSMD1-202ENST00000400186 A0A087WYN8 130 aa6.99□□□□□ -1.29
CSMD1-202ENST00000400186 C19orf84I3L1E1 186 aa6.99□□□□□ -1.29
CSMD1-202ENST00000400186 PSMG3-AS1Q96PY0 264 aa6.99□□□□□ -1.29
CSMD1-202ENST00000400186 NANOS2P60321 138 aaKnown RBP6.98□□□□□ -1.29
CSMD1-202ENST00000400186 MRGPRG-AS1Q2M3A8 158 aa6.98□□□□□ -1.29
CSMD1-202ENST00000400186 ZNF843Q8N446 348 aa6.98□□□□□ -1.29
CSMD1-202ENST00000400186 INAFM1C9JVW0 142 aa6.98□□□□□ -1.29
CSMD1-202ENST00000400186 TRBV10-3A0A0K0K1G6 114 aa6.98□□□□□ -1.29
CSMD1-202ENST00000400186 LINC00310P59036 64 aa6.98□□□□□ -1.29
CSMD1-202ENST00000400186 A0A087WVE0 104 aa6.98□□□□□ -1.29
CSMD1-202ENST00000400186 LINC00242Q5T6M2 205 aa6.98□□□□□ -1.29
CSMD1-202ENST00000400186 M0R2N4 97 aa6.97□□□□□ -1.29
CSMD1-202ENST00000400186 REG3GQ6UW15 175 aa6.97□□□□□ -1.29
CSMD1-202ENST00000400186 ZNF702PQ9H963 129 aa6.97□□□□□ -1.29
CSMD1-202ENST00000400186 Q8N6K4 173 aa6.97□□□□□ -1.29
CSMD1-202ENST00000400186 IGHV6-1A0A0B4J1U7 121 aa6.97□□□□□ -1.29
CSMD1-202ENST00000400186 CSDC2Q9Y534 153 aaKnown RBP6.97□□□□□ -1.29
CSMD1-202ENST00000400186 Q8N3U1 123 aa6.96□□□□□ -1.29
CSMD1-202ENST00000400186 RPL28P46779 137 aaKnown RBP6.96□□□□□ -1.3
CSMD1-202ENST00000400186 UNQ6190/PRO20217Q6UXQ8 127 aa6.96□□□□□ -1.3
CSMD1-202ENST00000400186 LINC01547P58512 204 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-202ENST00000400186 PRR3P79522 188 aaKnown RBP6.96□□□□□ -1.3
CSMD1-202ENST00000400186 C18orf65Q6ZTR6 163 aa6.96□□□□□ -1.3
CSMD1-202ENST00000400186 C11orf71Q6IPW1 123 aa6.96□□□□□ -1.3
CSMD1-202ENST00000400186 SHISA2Q6UWI4 295 aa6.96□□□□□ -1.3
CSMD1-202ENST00000400186 CIRBP-AS1Q8TBR5 109 aa6.95□□□□□ -1.3
CSMD1-202ENST00000400186 CR1P17927 2039 aa6.95□□□□□ -1.3
CSMD1-202ENST00000400186 TSPEAR-AS2P59090 65 aa6.95□□□□□ -1.3
CSMD1-202ENST00000400186 SMIM1B2RUZ4 78 aa6.95□□□□□ -1.3
CSMD1-202ENST00000400186 TRBV7-7A0A0K0K1E9 115 aa6.95□□□□□ -1.3
CSMD1-202ENST00000400186 EGFEM1PQ0D2K5 195 aa6.95□□□□□ -1.3
CSMD1-202ENST00000400186 ADAMTSL4-AS1Q5T5F5 129 aa6.95□□□□□ -1.3
CSMD1-202ENST00000400186 PRORYQ9H606 182 aa6.95□□□□□ -1.3
CSMD1-202ENST00000400186 IGLV1-40P01703 118 aa6.95□□□□□ -1.3
CSMD1-202ENST00000400186 CRIP2P52943 208 aaPredicted RBP6.95□□□□□ -1.3
CSMD1-202ENST00000400186 CRYGAP11844 174 aa6.94□□□□□ -1.3
CSMD1-202ENST00000400186 COX6A2Q02221 97 aa6.94□□□□□ -1.3
CSMD1-202ENST00000400186 X6R8D5 127 aa6.94□□□□□ -1.3
CSMD1-202ENST00000400186 FLNAP21333 2647 aaKnown RBP6.93□□□□□ -1.3
CSMD1-202ENST00000400186 H0Y9P7 68 aa6.93□□□□□ -1.3
CSMD1-202ENST00000400186 BEAN1Q3B7T3 259 aa6.93□□□□□ -1.3
CSMD1-202ENST00000400186 TMEM254Q8TBM7 123 aa6.92□□□□□ -1.3
CSMD1-202ENST00000400186 RETNLBQ9BQ08 111 aa6.92□□□□□ -1.3
CSMD1-202ENST00000400186 RETNQ9HD89 108 aa6.92□□□□□ -1.3
CSMD1-202ENST00000400186 CFAP46Q8IYW2 2715 aa6.92□□□□□ -1.3
CSMD1-202ENST00000400186 CHCHD7Q9BUK0 85 aa6.91□□□□□ -1.3
CSMD1-202ENST00000400186 PCOTHQ58A44 107 aa6.91□□□□□ -1.3
CSMD1-202ENST00000400186 Q9BRP9 147 aa6.91□□□□□ -1.3
CSMD1-202ENST00000400186 LINC00575Q6W349 94 aa6.91□□□□□ -1.3
CSMD1-202ENST00000400186 HCG22E2RYF7 251 aa6.91□□□□□ -1.3
CSMD1-202ENST00000400186 LINC01006Q8NI28 216 aa6.9□□□□□ -1.3
CSMD1-202ENST00000400186 LY6G6CO95867 125 aa6.9□□□□□ -1.3
CSMD1-202ENST00000400186 SBSPONQ8IVN8 264 aa6.9□□□□□ -1.3
CSMD1-202ENST00000400186 AMELXQ99217 191 aa6.9□□□□□ -1.3
CSMD1-202ENST00000400186 LY6G6DO95868 133 aa6.9□□□□□ -1.31
CSMD1-202ENST00000400186 SPINK1P00995 79 aa6.89□□□□□ -1.31
CSMD1-202ENST00000400186 NBEAL1Q6ZS30 2694 aa6.89□□□□□ -1.31
CSMD1-202ENST00000400186 URB1-AS1Q96HZ7 61 aa6.89□□□□□ -1.31
CSMD1-202ENST00000400186 NOTCH1P46531 2555 aa6.89□□□□□ -1.31
CSMD1-202ENST00000400186 ITPR3Q14573 2671 aa6.89□□□□□ -1.31
CSMD1-202ENST00000400186 CXCL6P80162 114 aa6.89□□□□□ -1.31
CSMD1-202ENST00000400186 C6orf223Q8N319 242 aa6.88□□□□□ -1.31
CSMD1-202ENST00000400186 IGLV4-60A0A075B6I1 120 aa6.87□□□□□ -1.31
CSMD1-202ENST00000400186 ZNF580Q9UK33 172 aa6.86□□□□□ -1.31
CSMD1-202ENST00000400186 A0A087WSZ3 146 aa6.86□□□□□ -1.31
CSMD1-202ENST00000400186 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
CSMD1-202ENST00000400186 CHD6Q8TD26 2715 aa6.86□□□□□ -1.31
CSMD1-202ENST00000400186 ODF3L2Q3SX64 289 aa6.86□□□□□ -1.31
CSMD1-202ENST00000400186 LINC00846Q9NV44 126 aa6.86□□□□□ -1.31
CSMD1-202ENST00000400186 STAB1Q9NY15 2570 aa6.86□□□□□ -1.31
CSMD1-202ENST00000400186 EDN2P20800 178 aa6.86□□□□□ -1.31
CSMD1-202ENST00000400186 NUPR2A6NF83 97 aa6.86□□□□□ -1.31
CSMD1-202ENST00000400186 A8MTW9 85 aa6.85□□□□□ -1.31
CSMD1-202ENST00000400186 IGLV5-52A0A0A0MRZ9 124 aa6.85□□□□□ -1.31
CSMD1-202ENST00000400186 LINC01556Q5JQF7 62 aa6.85□□□□□ -1.31
CSMD1-202ENST00000400186 C1orf64Q8NEQ6 169 aa6.85□□□□□ -1.31
CSMD1-202ENST00000400186 hDV103S1A0JD37 113 aa6.85□□□□□ -1.31
CSMD1-202ENST00000400186 F8WDY8 70 aa6.85□□□□□ -1.31
CSMD1-202ENST00000400186 DEFB116Q30KQ4 102 aa6.85□□□□□ -1.31
CSMD1-202ENST00000400186 PRO0628Q9UI54 55 aa6.85□□□□□ -1.31
CSMD1-202ENST00000400186 LINC00337Q8N6G1 96 aa6.84□□□□□ -1.31
CSMD1-202ENST00000400186 A0A1B0GUV1 79 aa6.84□□□□□ -1.31
CSMD1-202ENST00000400186 FHL2Q14192 279 aa6.84□□□□□ -1.32
CSMD1-202ENST00000400186 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
CSMD1-202ENST00000400186 A0A096LNJ9 63 aa6.83□□□□□ -1.32
CSMD1-202ENST00000400186 C2orf48Q96LS8 159 aa6.83□□□□□ -1.32
CSMD1-202ENST00000400186 SERTAD4-AS1Q5TG53 156 aa6.83□□□□□ -1.32
CSMD1-202ENST00000400186 COX8CQ7Z4L0 72 aa6.82□□□□□ -1.32
CSMD1-202ENST00000400186 Q6ZSN1 163 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms