RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 COX6A2Q02221 97 aa13.27□□□□□ -0.29
USP25-204ENST00000400183 C1orf137Q5JT78 98 aa13.27□□□□□ -0.29
USP25-204ENST00000400183 FAM30AQ9NZY2 134 aa13.26□□□□□ -0.29
USP25-204ENST00000400183 ATG2AQ2TAZ0 1938 aa13.26□□□□□ -0.29
USP25-204ENST00000400183 A0A1W2PPR1 153 aa13.26□□□□□ -0.29
USP25-204ENST00000400183 A6NED7 52 aa13.26□□□□□ -0.29
USP25-204ENST00000400183 Q6ZTC4 211 aa13.25□□□□□ -0.29
USP25-204ENST00000400183 AMELXQ99217 191 aa13.25□□□□□ -0.29
USP25-204ENST00000400183 REG3GQ6UW15 175 aa13.25□□□□□ -0.29
USP25-204ENST00000400183 TSPEAR-AS2P59090 65 aa13.24□□□□□ -0.29
USP25-204ENST00000400183 C16orf95Q9H693 158 aa13.24□□□□□ -0.29
USP25-204ENST00000400183 CELA1Q9UNI1 258 aa13.24□□□□□ -0.29
USP25-204ENST00000400183 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
USP25-204ENST00000400183 BEAN1Q3B7T3 259 aa13.23□□□□□ -0.29
USP25-204ENST00000400183 PRR3P79522 188 aaKnown RBP13.21□□□□□ -0.29
USP25-204ENST00000400183 TRAV7A0A075B6U4 112 aa13.2□□□□□ -0.3
USP25-204ENST00000400183 LRP4O75096 1905 aa13.2□□□□□ -0.3
USP25-204ENST00000400183 ADAMTSL4-AS1Q5T5F5 129 aa13.2□□□□□ -0.3
USP25-204ENST00000400183 A0A087WYN8 130 aa13.19□□□□□ -0.3
USP25-204ENST00000400183 A0A1B0GUV1 79 aa13.19□□□□□ -0.3
USP25-204ENST00000400183 A0A087WVE0 104 aa13.19□□□□□ -0.3
USP25-204ENST00000400183 F8WDY8 70 aa13.18□□□□□ -0.3
USP25-204ENST00000400183 SETD2Q9BYW2 2564 aaPredicted RBP13.18□□□□□ -0.3
USP25-204ENST00000400183 ESRGQ1W209 222 aa13.17□□□□□ -0.3
USP25-204ENST00000400183 LINC00208Q96KT6 92 aa13.17□□□□□ -0.3
USP25-204ENST00000400183 C1orf195Q5TG92 126 aa13.16□□□□□ -0.3
USP25-204ENST00000400183 CIRBP-AS1Q8TBR5 109 aa13.16□□□□□ -0.3
USP25-204ENST00000400183 SMIM26A0A096LP01 95 aa13.16□□□□□ -0.3
USP25-204ENST00000400183 IGLV5-52A0A0A0MRZ9 124 aa13.15□□□□□ -0.3
USP25-204ENST00000400183 C2orf48Q96LS8 159 aa13.15□□□□□ -0.3
USP25-204ENST00000400183 Q6ZSN1 163 aa13.15□□□□□ -0.3
USP25-204ENST00000400183 Q6ZVQ6 151 aa13.15□□□□□ -0.3
USP25-204ENST00000400183 EML5Q05BV3 1969 aa13.15□□□□□ -0.3
USP25-204ENST00000400183 CDIP1Q9H305 208 aa13.15□□□□□ -0.31
USP25-204ENST00000400183 USP9YO00507 2555 aaPredicted RBP13.13□□□□□ -0.31
USP25-204ENST00000400183 LRRK2Q5S007 2527 aa13.13□□□□□ -0.31
USP25-204ENST00000400183 LYPD5Q6UWN5 251 aa13.12□□□□□ -0.31
USP25-204ENST00000400183 LINC01561Q8N1V8 128 aa13.11□□□□□ -0.31
USP25-204ENST00000400183 Q9BRP9 147 aa13.11□□□□□ -0.31
USP25-204ENST00000400183 IGHV6-1A0A0B4J1U7 121 aa13.11□□□□□ -0.31
USP25-204ENST00000400183 PRYO14603 147 aa13.1□□□□□ -0.31
USP25-204ENST00000400183 LINC01547P58512 204 aaPredicted RBP13.1□□□□□ -0.31
USP25-204ENST00000400183 LINC01556Q5JQF7 62 aa13.1□□□□□ -0.31
USP25-204ENST00000400183 Q8N3U1 123 aa13.1□□□□□ -0.31
USP25-204ENST00000400183 PKD1L2Q7Z442 2459 aa13.09□□□□□ -0.31
USP25-204ENST00000400183 LINC00575Q6W349 94 aa13.09□□□□□ -0.31
USP25-204ENST00000400183 CEP295Q9C0D2 2601 aa13.08□□□□□ -0.31
USP25-204ENST00000400183 A0A087WSZ3 146 aa13.08□□□□□ -0.32
USP25-204ENST00000400183 CHD8Q9HCK8 2581 aa13.07□□□□□ -0.32
USP25-204ENST00000400183 RAI1Q7Z5J4 1906 aaPredicted RBP13.06□□□□□ -0.32
USP25-204ENST00000400183 SOSTDC1Q6X4U4 206 aa13.05□□□□□ -0.32
USP25-204ENST00000400183 EXPH5Q8NEV8 1989 aa13.05□□□□□ -0.32
USP25-204ENST00000400183 PTPRSQ13332 1948 aa13.05□□□□□ -0.32
USP25-204ENST00000400183 WDR87Q6ZQQ6 2873 aa13.05□□□□□ -0.32
USP25-204ENST00000400183 TRBV7-6A0A0J9YX20 115 aa13.04□□□□□ -0.32
USP25-204ENST00000400183 ANKRD11Q6UB99 2663 aaPredicted RBP13.04□□□□□ -0.32
USP25-204ENST00000400183 C1orf134Q5TEV5 83 aa13.04□□□□□ -0.32
USP25-204ENST00000400183 Q6ZRU5 148 aa13.04□□□□□ -0.32
USP25-204ENST00000400183 KIF25-AS1Q9Y6Z4 181 aa13.03□□□□□ -0.32
USP25-204ENST00000400183 AGRNO00468 2067 aa13.01□□□□□ -0.33
USP25-204ENST00000400183 ZNF462Q96JM2 2506 aa13.01□□□□□ -0.33
USP25-204ENST00000400183 Q8N2B8 174 aa13□□□□□ -0.33
USP25-204ENST00000400183 LINC00337Q8N6G1 96 aa13□□□□□ -0.33
USP25-204ENST00000400183 TRBV7-7A0A0K0K1E9 115 aa12.99□□□□□ -0.33
USP25-204ENST00000400183 A8MTW9 85 aa12.99□□□□□ -0.33
USP25-204ENST00000400183 C11orf72Q8NBR9 251 aa12.99□□□□□ -0.33
USP25-204ENST00000400183 PCOTHQ58A44 107 aa12.98□□□□□ -0.33
USP25-204ENST00000400183 COL5A1P20908 1838 aaPredicted RBP12.98□□□□□ -0.33
USP25-204ENST00000400183 SMCPP49901 116 aaPredicted RBP12.98□□□□□ -0.33
USP25-204ENST00000400183 FSHBP01225 129 aa12.97□□□□□ -0.33
USP25-204ENST00000400183 PRLHP81277 87 aa12.96□□□□□ -0.33
USP25-204ENST00000400183 LINC00846Q9NV44 126 aa12.96□□□□□ -0.33
USP25-204ENST00000400183 H0Y9P7 68 aa12.96□□□□□ -0.33
USP25-204ENST00000400183 IGLV5-39A0A0G2JS06 123 aa12.96□□□□□ -0.34
USP25-204ENST00000400183 FHL3Q13643 280 aa12.96□□□□□ -0.34
USP25-204ENST00000400183 MUC4Q99102 2169 aa12.95□□□□□ -0.34
USP25-204ENST00000400183 DEFB116Q30KQ4 102 aa12.95□□□□□ -0.34
USP25-204ENST00000400183 NHLRC4P0CG21 123 aaPredicted RBP12.95□□□□□ -0.34
USP25-204ENST00000400183 C22orf24Q9Y442 160 aa12.95□□□□□ -0.34
USP25-204ENST00000400183 RETNLBQ9BQ08 111 aa12.94□□□□□ -0.34
USP25-204ENST00000400183 PRO0461Q9UI25 63 aa12.94□□□□□ -0.34
USP25-204ENST00000400183 HCG22E2RYF7 251 aa12.93□□□□□ -0.34
USP25-204ENST00000400183 IGHV3OR16-9A0A0B4J2B5 98 aa12.93□□□□□ -0.34
USP25-204ENST00000400183 CPAMD8Q8IZJ3 1885 aa12.93□□□□□ -0.34
USP25-204ENST00000400183 TMEM254Q8TBM7 123 aa12.93□□□□□ -0.34
USP25-204ENST00000400183 SMCR5Q8TEV8 140 aa12.92□□□□□ -0.34
USP25-204ENST00000400183 X6R8D5 127 aa12.92□□□□□ -0.34
USP25-204ENST00000400183 LINC01546A6NGU7 62 aa12.91□□□□□ -0.34
USP25-204ENST00000400183 LIMD2Q9BT23 127 aa12.91□□□□□ -0.34
USP25-204ENST00000400183 PMAIP1Q13794 54 aa12.91□□□□□ -0.34
USP25-204ENST00000400183 MTORP42345 2549 aa12.91□□□□□ -0.34
USP25-204ENST00000400183 LINC00315P59091 139 aa12.89□□□□□ -0.35
USP25-204ENST00000400183 SBSPONQ8IVN8 264 aa12.89□□□□□ -0.35
USP25-204ENST00000400183 SPINK1P00995 79 aa12.88□□□□□ -0.35
USP25-204ENST00000400183 CXCL6P80162 114 aa12.88□□□□□ -0.35
USP25-204ENST00000400183 hDV103S1A0JD37 113 aa12.86□□□□□ -0.35
USP25-204ENST00000400183 FAM19A4Q96LR4 140 aa12.86□□□□□ -0.35
USP25-204ENST00000400183 TET2Q6N021 2002 aaPredicted RBP12.86□□□□□ -0.35
USP25-204ENST00000400183 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
USP25-204ENST00000400183 PSPHP1O15172 72 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms