RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ODF1Q14990 250 aa11.31□□□□□ -0.6
CTNS-203ENST00000399306 FABP4P15090 132 aa11.3□□□□□ -0.6
CTNS-203ENST00000399306 MAP1LC3CQ9BXW4 147 aa11.3□□□□□ -0.6
CTNS-203ENST00000399306 CKS1BP61024 79 aa11.29□□□□□ -0.6
CTNS-203ENST00000399306 UNQ6190/PRO20217Q6UXQ8 127 aa11.29□□□□□ -0.6
CTNS-203ENST00000399306 SPACA4Q8TDM5 124 aa11.29□□□□□ -0.6
CTNS-203ENST00000399306 COX7B2Q8TF08 81 aa11.29□□□□□ -0.6
CTNS-203ENST00000399306 TOMM7Q9P0U1 55 aa11.29□□□□□ -0.6
CTNS-203ENST00000399306 SPINK8P0C7L1 97 aa11.28□□□□□ -0.6
CTNS-203ENST00000399306 PLNP26678 52 aa11.28□□□□□ -0.6
CTNS-203ENST00000399306 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
CTNS-203ENST00000399306 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
CTNS-203ENST00000399306 SFTA2Q6UW10 78 aa11.27□□□□□ -0.61
CTNS-203ENST00000399306 SCXQ7RTU7 201 aa11.27□□□□□ -0.61
CTNS-203ENST00000399306 C6orf48Q9UBA6 75 aa11.27□□□□□ -0.61
CTNS-203ENST00000399306 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.27□□□□□ -0.61
CTNS-203ENST00000399306 Q8N1X5 172 aa11.26□□□□□ -0.61
CTNS-203ENST00000399306 CIRBP-AS1Q8TBR5 109 aa11.26□□□□□ -0.61
CTNS-203ENST00000399306 A0A096LNI7 61 aa11.25□□□□□ -0.61
CTNS-203ENST00000399306 TMEM223A0PJW6 202 aa11.25□□□□□ -0.61
CTNS-203ENST00000399306 PTTG1IPP53801 180 aa11.25□□□□□ -0.61
CTNS-203ENST00000399306 C2orf82Q6UX34 121 aa11.25□□□□□ -0.61
CTNS-203ENST00000399306 PANO1I0J062 215 aa11.24□□□□□ -0.61
CTNS-203ENST00000399306 DPM2O94777 84 aa11.24□□□□□ -0.61
CTNS-203ENST00000399306 PLAC8Q9NZF1 115 aa11.24□□□□□ -0.61
CTNS-203ENST00000399306 NDUFC2-KCTD14E9PQ53 114 aa11.23□□□□□ -0.61
CTNS-203ENST00000399306 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
CTNS-203ENST00000399306 PET117Q6UWS5 81 aa11.23□□□□□ -0.61
CTNS-203ENST00000399306 EPM2AB3EWF7 344 aa11.22□□□□□ -0.61
CTNS-203ENST00000399306 H0Y8G0 127 aa11.22□□□□□ -0.61
CTNS-203ENST00000399306 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
CTNS-203ENST00000399306 A0A087WYN8 130 aa11.21□□□□□ -0.61
CTNS-203ENST00000399306 IGKV2-24A0A0C4DH68 120 aa11.21□□□□□ -0.61
CTNS-203ENST00000399306 IGKCP01834 107 aa11.21□□□□□ -0.61
CTNS-203ENST00000399306 MAJINQ3KP22 176 aa11.21□□□□□ -0.61
CTNS-203ENST00000399306 FAT1Q14517 4588 aa11.21□□□□□ -0.62
CTNS-203ENST00000399306 S100A6P06703 90 aa11.2□□□□□ -0.62
CTNS-203ENST00000399306 RPL18AQ02543 176 aaKnown RBP11.2□□□□□ -0.62
CTNS-203ENST00000399306 GAGE2BQ13066 116 aa11.2□□□□□ -0.62
CTNS-203ENST00000399306 LINC01545Q5VT33 79 aa11.2□□□□□ -0.62
CTNS-203ENST00000399306 DPH3Q96FX2 82 aa11.2□□□□□ -0.62
CTNS-203ENST00000399306 VPS13BQ7Z7G8 4022 aa11.19□□□□□ -0.62
CTNS-203ENST00000399306 AKR1D1P51857 326 aa11.19□□□□□ -0.62
CTNS-203ENST00000399306 Q6ZRP5 223 aa11.19□□□□□ -0.62
CTNS-203ENST00000399306 FAM229AH3BQW9 127 aa11.18□□□□□ -0.62
CTNS-203ENST00000399306 C3orf79P0CE67 100 aa11.18□□□□□ -0.62
CTNS-203ENST00000399306 HERVK_113P61574 105 aa11.18□□□□□ -0.62
CTNS-203ENST00000399306 HAMPP81172 84 aa11.18□□□□□ -0.62
CTNS-203ENST00000399306 STPG4Q8N801 248 aa11.18□□□□□ -0.62
CTNS-203ENST00000399306 COX17Q14061 63 aa11.17□□□□□ -0.62
CTNS-203ENST00000399306 HIST3H2BBQ8N257 126 aa11.17□□□□□ -0.62
CTNS-203ENST00000399306 ZNF625Q96I27 306 aaPredicted RBP11.17□□□□□ -0.62
CTNS-203ENST00000399306 C9orf116Q5BN46 136 aaPredicted RBP11.16□□□□□ -0.62
CTNS-203ENST00000399306 PLEKHB2Q96CS7 222 aa11.16□□□□□ -0.62
CTNS-203ENST00000399306 C20orf202A1L168 122 aa11.15□□□□□ -0.62
CTNS-203ENST00000399306 SMR3BP02814 79 aaPredicted RBP11.15□□□□□ -0.62
CTNS-203ENST00000399306 S100A2P29034 98 aa11.15□□□□□ -0.62
CTNS-203ENST00000399306 LINC00528Q8N1L1 170 aa11.15□□□□□ -0.62
CTNS-203ENST00000399306 LEPROTO15243 131 aa11.14□□□□□ -0.63
CTNS-203ENST00000399306 KRTDAPP60985 99 aa11.14□□□□□ -0.63
CTNS-203ENST00000399306 HERV-K104P63124 156 aa11.14□□□□□ -0.63
CTNS-203ENST00000399306 PMCHL2Q9BQD1 86 aa11.14□□□□□ -0.63
CTNS-203ENST00000399306 PLA2G1BP04054 148 aaKnown RBP11.13□□□□□ -0.63
CTNS-203ENST00000399306 HIST1H2BLQ99880 126 aa11.13□□□□□ -0.63
CTNS-203ENST00000399306 KRTAP17-1Q9BYP8 105 aa11.13□□□□□ -0.63
CTNS-203ENST00000399306 LINC00587B1AMM8 73 aa11.12□□□□□ -0.63
CTNS-203ENST00000399306 NMUP48645 174 aa11.12□□□□□ -0.63
CTNS-203ENST00000399306 GAGE2EQ4V326 116 aa11.12□□□□□ -0.63
CTNS-203ENST00000399306 Q5VSD8 79 aa11.12□□□□□ -0.63
CTNS-203ENST00000399306 GAGE2DQ9UEU5 116 aa11.12□□□□□ -0.63
CTNS-203ENST00000399306 ERG28Q9UKR5 140 aa11.12□□□□□ -0.63
CTNS-203ENST00000399306 MYMXA0A1B0GTQ4 84 aa11.11□□□□□ -0.63
CTNS-203ENST00000399306 C5orf52A6NGY3 159 aa11.11□□□□□ -0.63
CTNS-203ENST00000399306 E9PLD3 99 aa11.11□□□□□ -0.63
CTNS-203ENST00000399306 C7orf33Q8WU49 177 aa11.11□□□□□ -0.63
CTNS-203ENST00000399306 A0A1W2PNN7 141 aa11.1□□□□□ -0.63
CTNS-203ENST00000399306 C9orf129Q5T035 196 aaKnown RBP11.1□□□□□ -0.63
CTNS-203ENST00000399306 J3QQQ9 107 aa11.09□□□□□ -0.63
CTNS-203ENST00000399306 SNRPEP62304 92 aaKnown RBP11.09□□□□□ -0.63
CTNS-203ENST00000399306 NDUFA12Q9UI09 145 aa11.09□□□□□ -0.63
CTNS-203ENST00000399306 PLA2G2DQ9UNK4 145 aa11.09□□□□□ -0.63
CTNS-203ENST00000399306 LGALS3P17931 250 aaKnown RBP11.06□□□□□ -0.64
CTNS-203ENST00000399306 TSPEAR-AS2P59090 65 aa11.06□□□□□ -0.64
CTNS-203ENST00000399306 PFN2P35080 140 aa11.05□□□□□ -0.64
CTNS-203ENST00000399306 RPL37AP61513 92 aaKnown RBP11.05□□□□□ -0.64
CTNS-203ENST00000399306 TP73-AS1Q9UF72 201 aa11.05□□□□□ -0.64
CTNS-203ENST00000399306 SRRM2Q9UQ35 2752 aaKnown RBP11.05□□□□□ -0.64
CTNS-203ENST00000399306 ABCA13Q86UQ4 5058 aa11.05□□□□□ -0.64
CTNS-203ENST00000399306 KRTAP10-4P60372 401 aaPredicted RBP11.04□□□□□ -0.64
CTNS-203ENST00000399306 KRTAP4-5Q9BYR2 181 aa11.04□□□□□ -0.64
CTNS-203ENST00000399306 XAGE1AQ9HD64 81 aa11.04□□□□□ -0.64
CTNS-203ENST00000399306 IGLV5-37A0A075B6J1 123 aa11.03□□□□□ -0.64
CTNS-203ENST00000399306 FAM168BA1KXE4 195 aa11.03□□□□□ -0.64
CTNS-203ENST00000399306 KRTAP7-1Q8IUC3 87 aa11.03□□□□□ -0.64
CTNS-203ENST00000399306 LINC00158P58513 81 aa11.02□□□□□ -0.65
CTNS-203ENST00000399306 MEIG1Q5JSS6 88 aa11.02□□□□□ -0.65
CTNS-203ENST00000399306 FAM19A5Q7Z5A7 132 aaPredicted RBP11.02□□□□□ -0.65
CTNS-203ENST00000399306 SND1-IT1Q9HBX3 110 aa11.02□□□□□ -0.65
CTNS-203ENST00000399306 M0QXV9 152 aa11.01□□□□□ -0.65
CTNS-203ENST00000399306 LBHQ53QV2 105 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms