RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 PCOTHQ58A44 107 aa5.8□□□□□ -1.48
SPTLC3-201ENST00000399002 ICE1Q9Y2F5 2266 aa5.8□□□□□ -1.48
SPTLC3-201ENST00000399002 TECTAO75443 2155 aa5.79□□□□□ -1.48
SPTLC3-201ENST00000399002 A0A1W2PPR1 153 aa5.79□□□□□ -1.48
SPTLC3-201ENST00000399002 DIDO1Q9BTC0 2240 aaKnown RBP5.79□□□□□ -1.48
SPTLC3-201ENST00000399002 ERC2-IT1O76042 136 aa5.79□□□□□ -1.48
SPTLC3-201ENST00000399002 Q8NBF4 154 aa5.79□□□□□ -1.48
SPTLC3-201ENST00000399002 PRO0461Q9UI25 63 aa5.79□□□□□ -1.48
SPTLC3-201ENST00000399002 C6orf48Q9UBA6 75 aa5.78□□□□□ -1.48
SPTLC3-201ENST00000399002 ZGRF1Q86YA3 2104 aa5.78□□□□□ -1.48
SPTLC3-201ENST00000399002 C7orf65Q6ZTY9 151 aa5.78□□□□□ -1.48
SPTLC3-201ENST00000399002 Q6ZRX8 168 aa5.77□□□□□ -1.49
SPTLC3-201ENST00000399002 SMR3AQ99954 134 aa5.77□□□□□ -1.49
SPTLC3-201ENST00000399002 USF3Q68DE3 2245 aa5.77□□□□□ -1.49
SPTLC3-201ENST00000399002 PSPHP1O15172 72 aa5.76□□□□□ -1.49
SPTLC3-201ENST00000399002 LINC00167Q96N53 147 aa5.76□□□□□ -1.49
SPTLC3-201ENST00000399002 DSCAMO60469 2012 aa5.76□□□□□ -1.49
SPTLC3-201ENST00000399002 PRLHP81277 87 aa5.76□□□□□ -1.49
SPTLC3-201ENST00000399002 SMCPP49901 116 aaPredicted RBP5.76□□□□□ -1.49
SPTLC3-201ENST00000399002 A0A1B0GU69 56 aa5.76□□□□□ -1.49
SPTLC3-201ENST00000399002 C8orf87E5RJ46 101 aa5.76□□□□□ -1.49
SPTLC3-201ENST00000399002 C16orf90A8MZG2 172 aa5.75□□□□□ -1.49
SPTLC3-201ENST00000399002 DOCK10Q96BY6 2186 aa5.75□□□□□ -1.49
SPTLC3-201ENST00000399002 MOBPQ13875 183 aa5.75□□□□□ -1.49
SPTLC3-201ENST00000399002 X6R8D5 127 aa5.74□□□□□ -1.49
SPTLC3-201ENST00000399002 FAM186AA6NE01 2351 aa5.74□□□□□ -1.49
SPTLC3-201ENST00000399002 TRBV7-4A0A0J9YYF1 115 aa5.74□□□□□ -1.49
SPTLC3-201ENST00000399002 TPRP12270 2363 aaKnown RBP5.73□□□□□ -1.49
SPTLC3-201ENST00000399002 FAM218AQ96MZ4 157 aa5.73□□□□□ -1.49
SPTLC3-201ENST00000399002 MDFIQ99750 246 aa5.73□□□□□ -1.49
SPTLC3-201ENST00000399002 RETNLBQ9BQ08 111 aa5.73□□□□□ -1.49
SPTLC3-201ENST00000399002 TRAV22A0A0B4J277 110 aa5.73□□□□□ -1.49
SPTLC3-201ENST00000399002 RP1L1Q8IWN7 2480 aaPredicted RBP5.72□□□□□ -1.49
SPTLC3-201ENST00000399002 LOC101927531A0A1B0GV80 90 aa5.72□□□□□ -1.49
SPTLC3-201ENST00000399002 A8MTW9 85 aa5.72□□□□□ -1.49
SPTLC3-201ENST00000399002 LINC00476Q8WZB0 136 aa5.72□□□□□ -1.49
SPTLC3-201ENST00000399002 IGLV6-57P01721 117 aa5.72□□□□□ -1.49
SPTLC3-201ENST00000399002 DEFB116Q30KQ4 102 aa5.72□□□□□ -1.49
SPTLC3-201ENST00000399002 FREM1Q5H8C1 2179 aa5.71□□□□□ -1.49
SPTLC3-201ENST00000399002 Q6ZRP5 223 aa5.71□□□□□ -1.5
SPTLC3-201ENST00000399002 LITAFQ99732 161 aa5.71□□□□□ -1.5
SPTLC3-201ENST00000399002 PCNX2A6NKB5 2137 aa5.7□□□□□ -1.5
SPTLC3-201ENST00000399002 LINC00313P59037 77 aa5.7□□□□□ -1.5
SPTLC3-201ENST00000399002 COL27A1Q8IZC6 1860 aaPredicted RBP5.69□□□□□ -1.5
SPTLC3-201ENST00000399002 PKDREJQ9NTG1 2253 aa5.69□□□□□ -1.5
SPTLC3-201ENST00000399002 A8MWP4 228 aa5.69□□□□□ -1.5
SPTLC3-201ENST00000399002 SPINK1P00995 79 aa5.69□□□□□ -1.5
SPTLC3-201ENST00000399002 SPAG11AQ6PDA7 123 aa5.69□□□□□ -1.5
SPTLC3-201ENST00000399002 DNAH10OSP0CZ25 163 aa5.69□□□□□ -1.5
SPTLC3-201ENST00000399002 Q8NAQ8 132 aa5.69□□□□□ -1.5
SPTLC3-201ENST00000399002 CYP4F30PQ9H0H9 118 aa5.69□□□□□ -1.5
SPTLC3-201ENST00000399002 RTL8CO15255 209 aa5.68□□□□□ -1.5
SPTLC3-201ENST00000399002 IGKV2D-30A0A075B6S6 120 aa5.68□□□□□ -1.5
SPTLC3-201ENST00000399002 IGKV2-30P06310 120 aa5.68□□□□□ -1.5
SPTLC3-201ENST00000399002 EPM2AB3EWF7 344 aa5.68□□□□□ -1.5
SPTLC3-201ENST00000399002 NBDYA0A0U1RRE5 68 aa5.68□□□□□ -1.5
SPTLC3-201ENST00000399002 PTPRBP23467 1997 aa5.67□□□□□ -1.5
SPTLC3-201ENST00000399002 PLA2G2DQ9UNK4 145 aa5.67□□□□□ -1.5
SPTLC3-201ENST00000399002 CEP250Q9BV73 2442 aa5.67□□□□□ -1.5
SPTLC3-201ENST00000399002 RPL37AP61513 92 aaKnown RBP5.67□□□□□ -1.5
SPTLC3-201ENST00000399002 SPTA1P02549 2419 aa5.66□□□□□ -1.5
SPTLC3-201ENST00000399002 VPREB1P12018 145 aa5.66□□□□□ -1.5
SPTLC3-201ENST00000399002 FAM229AH3BQW9 127 aa5.66□□□□□ -1.5
SPTLC3-201ENST00000399002 KCNQ1DNQ9H478 68 aa5.66□□□□□ -1.5
SPTLC3-201ENST00000399002 PHF5AQ7RTV0 110 aaKnown RBP5.65□□□□□ -1.51
SPTLC3-201ENST00000399002 IGLV1-50A0A075B6I6 118 aa5.65□□□□□ -1.51
SPTLC3-201ENST00000399002 LINC00588Q9Y4M8 146 aa5.64□□□□□ -1.51
SPTLC3-201ENST00000399002 CADP27708 2225 aa5.64□□□□□ -1.51
SPTLC3-201ENST00000399002 ZNF318Q5VUA4 2279 aa5.64□□□□□ -1.51
SPTLC3-201ENST00000399002 SPACA4Q8TDM5 124 aa5.63□□□□□ -1.51
SPTLC3-201ENST00000399002 MRPL34Q9BQ48 92 aaKnown RBP5.63□□□□□ -1.51
SPTLC3-201ENST00000399002 TYMSOSQ8TAI1 123 aa5.63□□□□□ -1.51
SPTLC3-201ENST00000399002 TLX1NBP0CAT3 122 aa5.63□□□□□ -1.51
SPTLC3-201ENST00000399002 COL6A6A6NMZ7 2263 aa5.62□□□□□ -1.51
SPTLC3-201ENST00000399002 WNK2Q9Y3S1 2297 aa5.62□□□□□ -1.51
SPTLC3-201ENST00000399002 TM2D3Q9BRN9 247 aa5.62□□□□□ -1.51
SPTLC3-201ENST00000399002 C4orf26Q17RF5 130 aa5.62□□□□□ -1.51
SPTLC3-201ENST00000399002 ACACAQ13085 2346 aa5.62□□□□□ -1.51
SPTLC3-201ENST00000399002 PRR14LQ5THK1 2151 aa5.61□□□□□ -1.51
SPTLC3-201ENST00000399002 TET2Q6N021 2002 aaPredicted RBP5.61□□□□□ -1.51
SPTLC3-201ENST00000399002 PLA2G1BP04054 148 aaKnown RBP5.61□□□□□ -1.51
SPTLC3-201ENST00000399002 ST20-AS1Q8NBB2 130 aa5.61□□□□□ -1.51
SPTLC3-201ENST00000399002 APC2O95996 2303 aa5.61□□□□□ -1.51
SPTLC3-201ENST00000399002 CSNK1G2-AS1Q8NCQ2 148 aa5.61□□□□□ -1.51
SPTLC3-201ENST00000399002 MAP1BP46821 2468 aaKnown RBP5.61□□□□□ -1.51
SPTLC3-201ENST00000399002 Q9UF83 564 aa5.61□□□□□ -1.51
SPTLC3-201ENST00000399002 PCSK5Q92824 1860 aa5.61□□□□□ -1.51
SPTLC3-201ENST00000399002 CACNA1BQ00975 2339 aa5.6□□□□□ -1.51
SPTLC3-201ENST00000399002 LINC00528Q8N1L1 170 aa5.6□□□□□ -1.51
SPTLC3-201ENST00000399002 LINC00612Q8N6U2 182 aa5.6□□□□□ -1.51
SPTLC3-201ENST00000399002 PRR34Q9NV39 138 aa5.59□□□□□ -1.51
SPTLC3-201ENST00000399002 COA5Q86WW8 74 aa5.59□□□□□ -1.51
SPTLC3-201ENST00000399002 KLKP1Q107X0 134 aa5.59□□□□□ -1.52
SPTLC3-201ENST00000399002 CEP290O15078 2479 aa5.59□□□□□ -1.52
SPTLC3-201ENST00000399002 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
SPTLC3-201ENST00000399002 POLEQ07864 2286 aa5.58□□□□□ -1.52
SPTLC3-201ENST00000399002 Q96NJ1 140 aa5.57□□□□□ -1.52
SPTLC3-201ENST00000399002 KRTAP24-1Q3LI83 254 aa5.57□□□□□ -1.52
SPTLC3-201ENST00000399002 SSBP3-AS1Q7Z2R9 100 aa5.57□□□□□ -1.52
SPTLC3-201ENST00000399002 ABCA4P78363 2273 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms