RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 COX6CP09669 75 aa13.33□□□□□ -0.28
PDLIM2-204ENST00000397760 C9JAW5 83 aa13.32□□□□□ -0.28
PDLIM2-204ENST00000397760 TMEM262E9PQX1 116 aa13.32□□□□□ -0.28
PDLIM2-204ENST00000397760 ANKRD29Q8N6D5 301 aa13.32□□□□□ -0.28
PDLIM2-204ENST00000397760 UBE2L6O14933 153 aa13.32□□□□□ -0.28
PDLIM2-204ENST00000397760 LINC01620Q4KN68 170 aa13.32□□□□□ -0.28
PDLIM2-204ENST00000397760 CDIP1Q9H305 208 aa13.32□□□□□ -0.28
PDLIM2-204ENST00000397760 TRIAP1O43715 76 aa13.31□□□□□ -0.28
PDLIM2-204ENST00000397760 CHCHD5Q9BSY4 110 aa13.31□□□□□ -0.28
PDLIM2-204ENST00000397760 H7C2G1 150 aa13.3□□□□□ -0.28
PDLIM2-204ENST00000397760 CDC42SE2Q9NRR3 84 aa13.29□□□□□ -0.28
PDLIM2-204ENST00000397760 TRBV10-2A0A0K0K1G8 114 aa13.29□□□□□ -0.28
PDLIM2-204ENST00000397760 COX6A2Q02221 97 aa13.29□□□□□ -0.28
PDLIM2-204ENST00000397760 GAGE6Q13070 117 aa13.29□□□□□ -0.28
PDLIM2-204ENST00000397760 LYPD5Q6UWN5 251 aa13.29□□□□□ -0.28
PDLIM2-204ENST00000397760 HERV-K104P63124 156 aa13.28□□□□□ -0.28
PDLIM2-204ENST00000397760 SMIM1B2RUZ4 78 aa13.27□□□□□ -0.28
PDLIM2-204ENST00000397760 LELP1Q5T871 98 aa13.27□□□□□ -0.28
PDLIM2-204ENST00000397760 C15orf53Q8NAA6 179 aa13.27□□□□□ -0.28
PDLIM2-204ENST00000397760 RPL13AP40429 203 aaKnown RBP13.27□□□□□ -0.29
PDLIM2-204ENST00000397760 H3BT86 120 aa13.25□□□□□ -0.29
PDLIM2-204ENST00000397760 Q9H8V8 135 aa13.25□□□□□ -0.29
PDLIM2-204ENST00000397760 STAB2Q8WWQ8 2551 aa13.25□□□□□ -0.29
PDLIM2-204ENST00000397760 LINC00308Q8TCZ7 52 aa13.25□□□□□ -0.29
PDLIM2-204ENST00000397760 ZNF625Q96I27 306 aaPredicted RBP13.24□□□□□ -0.29
PDLIM2-204ENST00000397760 ESRGQ1W209 222 aa13.23□□□□□ -0.29
PDLIM2-204ENST00000397760 TRAV13-1A0A0B4J241 112 aa13.22□□□□□ -0.29
PDLIM2-204ENST00000397760 LST1O00453 97 aa13.22□□□□□ -0.29
PDLIM2-204ENST00000397760 IGLV4-60A0A075B6I1 120 aa13.21□□□□□ -0.29
PDLIM2-204ENST00000397760 A0A1B0GUV1 79 aa13.2□□□□□ -0.3
PDLIM2-204ENST00000397760 A0A1B0GV72 72 aa13.2□□□□□ -0.3
PDLIM2-204ENST00000397760 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
PDLIM2-204ENST00000397760 FBN3Q75N90 2809 aa13.19□□□□□ -0.3
PDLIM2-204ENST00000397760 NPC2P61916 151 aa13.18□□□□□ -0.3
PDLIM2-204ENST00000397760 C2orf82Q6UX34 121 aa13.18□□□□□ -0.3
PDLIM2-204ENST00000397760 XGP55808 180 aa13.18□□□□□ -0.3
PDLIM2-204ENST00000397760 NUPR2A6NF83 97 aa13.17□□□□□ -0.3
PDLIM2-204ENST00000397760 UBE2WQ96B02 151 aa13.17□□□□□ -0.3
PDLIM2-204ENST00000397760 MEIG1Q5JSS6 88 aa13.16□□□□□ -0.3
PDLIM2-204ENST00000397760 Q8N3U1 123 aa13.16□□□□□ -0.3
PDLIM2-204ENST00000397760 DAND5Q8N907 189 aa13.16□□□□□ -0.3
PDLIM2-204ENST00000397760 MT-ATP8P03928 68 aa13.16□□□□□ -0.3
PDLIM2-204ENST00000397760 WFDC10BQ8IUB3 73 aa13.16□□□□□ -0.3
PDLIM2-204ENST00000397760 KLK5Q9Y337 293 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-204ENST00000397760 COX7A2LO14548 114 aa13.14□□□□□ -0.31
PDLIM2-204ENST00000397760 CCL18P55774 89 aa13.14□□□□□ -0.31
PDLIM2-204ENST00000397760 APLNQ9ULZ1 77 aa13.14□□□□□ -0.31
PDLIM2-204ENST00000397760 LINC00588Q9Y4M8 146 aa13.14□□□□□ -0.31
PDLIM2-204ENST00000397760 IGKV3OR2-268A0A0C4DH90 116 aa13.13□□□□□ -0.31
PDLIM2-204ENST00000397760 ANGP03950 147 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-204ENST00000397760 SOSTDC1Q6X4U4 206 aa13.13□□□□□ -0.31
PDLIM2-204ENST00000397760 DYNC2H1Q8NCM8 4307 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-204ENST00000397760 COX7B2Q8TF08 81 aa13.12□□□□□ -0.31
PDLIM2-204ENST00000397760 CLEC2BQ92478 149 aa13.12□□□□□ -0.31
PDLIM2-204ENST00000397760 FAM240AA0A1B0GVK7 77 aa13.11□□□□□ -0.31
PDLIM2-204ENST00000397760 TRAV8-4A0A0B4J246 113 aa13.11□□□□□ -0.31
PDLIM2-204ENST00000397760 TEX49A0A1B0GTD5 131 aa13.11□□□□□ -0.31
PDLIM2-204ENST00000397760 LINC00269Q8N2A0 174 aa13.11□□□□□ -0.31
PDLIM2-204ENST00000397760 CKS1BP61024 79 aa13.1□□□□□ -0.31
PDLIM2-204ENST00000397760 TRAV13-2A0A0B4J235 113 aa13.09□□□□□ -0.31
PDLIM2-204ENST00000397760 IGHV3OR16-9A0A0B4J2B5 98 aa13.09□□□□□ -0.31
PDLIM2-204ENST00000397760 CLPSL2Q6UWE3 100 aa13.09□□□□□ -0.31
PDLIM2-204ENST00000397760 DNAH7Q8WXX0 4024 aa13.09□□□□□ -0.31
PDLIM2-204ENST00000397760 TRACP01848 142 aa13.09□□□□□ -0.31
PDLIM2-204ENST00000397760 A0A087WZ39 114 aa13.08□□□□□ -0.32
PDLIM2-204ENST00000397760 LINC00959A0A1B0GUT2 108 aa13.08□□□□□ -0.32
PDLIM2-204ENST00000397760 KLK12Q9UKR0 248 aa13.08□□□□□ -0.32
PDLIM2-204ENST00000397760 REG3AQ06141 175 aa13.07□□□□□ -0.32
PDLIM2-204ENST00000397760 LINC01556Q5JQF7 62 aa13.07□□□□□ -0.32
PDLIM2-204ENST00000397760 A0A0U1RRA0 63 aa13.06□□□□□ -0.32
PDLIM2-204ENST00000397760 IBA57-AS1B1ANH7 110 aa13.06□□□□□ -0.32
PDLIM2-204ENST00000397760 Q6Q795 121 aa13.06□□□□□ -0.32
PDLIM2-204ENST00000397760 MUC7Q8TAX7 377 aa13.06□□□□□ -0.32
PDLIM2-204ENST00000397760 UPK3BQ9BT76 320 aa13.06□□□□□ -0.32
PDLIM2-204ENST00000397760 SNCGO76070 127 aa13.05□□□□□ -0.32
PDLIM2-204ENST00000397760 DNAH10OSP0CZ25 163 aa13.05□□□□□ -0.32
PDLIM2-204ENST00000397760 SS18Q15532 418 aa13.05□□□□□ -0.32
PDLIM2-204ENST00000397760 LINC01561Q8N1V8 128 aa13.05□□□□□ -0.32
PDLIM2-204ENST00000397760 RPL28P46779 137 aaKnown RBP13.04□□□□□ -0.32
PDLIM2-204ENST00000397760 WWC2-AS2Q96NR7 200 aa13.04□□□□□ -0.32
PDLIM2-204ENST00000397760 UBE2DNLQ8IWF7 75 aa13.04□□□□□ -0.32
PDLIM2-204ENST00000397760 PRR34Q9NV39 138 aa13.04□□□□□ -0.32
PDLIM2-204ENST00000397760 ENHOQ6UWT2 76 aa13.03□□□□□ -0.32
PDLIM2-204ENST00000397760 CRPP02741 224 aa13.02□□□□□ -0.33
PDLIM2-204ENST00000397760 ACYP1P07311 99 aa13.02□□□□□ -0.33
PDLIM2-204ENST00000397760 MIR7-3HGQ8N6C7 128 aa13.02□□□□□ -0.33
PDLIM2-204ENST00000397760 CSMD3Q7Z407 3707 aa13.01□□□□□ -0.33
PDLIM2-204ENST00000397760 XCL1P47992 114 aa13.01□□□□□ -0.33
PDLIM2-204ENST00000397760 IGLV10-54A0A075B6I4 117 aa13□□□□□ -0.33
PDLIM2-204ENST00000397760 GAGE2BQ13066 116 aa13□□□□□ -0.33
PDLIM2-204ENST00000397760 GAGE2EQ4V326 116 aa13□□□□□ -0.33
PDLIM2-204ENST00000397760 SND1-IT1Q9HBX3 110 aa13□□□□□ -0.33
PDLIM2-204ENST00000397760 GAGE2DQ9UEU5 116 aa13□□□□□ -0.33
PDLIM2-204ENST00000397760 CHCHD10Q8WYQ3 142 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-204ENST00000397760 TOMM7Q9P0U1 55 aa12.99□□□□□ -0.33
PDLIM2-204ENST00000397760 PLECQ15149 4684 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-204ENST00000397760 STARD9Q9P2P6 4700 aa12.98□□□□□ -0.33
PDLIM2-204ENST00000397760 LINC00158P58513 81 aa12.98□□□□□ -0.33
PDLIM2-204ENST00000397760 CD164L2Q6UWJ8 174 aa12.97□□□□□ -0.33
PDLIM2-204ENST00000397760 C5orf38Q86SI9 138 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms