RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 COX17Q14061 63 aa12.66□□□□□ -0.38
TSPAN4-204ENST00000397404 VPS13DQ5THJ4 4388 aa12.66□□□□□ -0.38
TSPAN4-204ENST00000397404 PPDPFQ9H3Y8 114 aa12.65□□□□□ -0.38
TSPAN4-204ENST00000397404 TP73-AS1Q9UF72 201 aa12.65□□□□□ -0.38
TSPAN4-204ENST00000397404 CTAG1AP78358 180 aa12.65□□□□□ -0.38
TSPAN4-204ENST00000397404 C14orf177Q52M58 125 aa12.65□□□□□ -0.38
TSPAN4-204ENST00000397404 LINC00476Q8WZB0 136 aa12.65□□□□□ -0.38
TSPAN4-204ENST00000397404 KRTAP1-5Q9BYS1 174 aa12.64□□□□□ -0.39
TSPAN4-204ENST00000397404 DNAH1Q9P2D7 4330 aa12.63□□□□□ -0.39
TSPAN4-204ENST00000397404 PSCAO43653 123 aa12.63□□□□□ -0.39
TSPAN4-204ENST00000397404 SRSF9Q13242 221 aaKnown RBP eCLIP12.63□□□□□ -0.39
TSPAN4-204ENST00000397404 HIST1H4GQ99525 98 aa12.63□□□□□ -0.39
TSPAN4-204ENST00000397404 SPANXDQ9BXN6 97 aa12.63□□□□□ -0.39
TSPAN4-204ENST00000397404 SPANXCQ9NY87 97 aa12.63□□□□□ -0.39
TSPAN4-204ENST00000397404 TRBV30A0A0K0K1B3 111 aa12.62□□□□□ -0.39
TSPAN4-204ENST00000397404 IFITM1P13164 125 aa12.62□□□□□ -0.39
TSPAN4-204ENST00000397404 PTTG1IPP53801 180 aa12.62□□□□□ -0.39
TSPAN4-204ENST00000397404 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
TSPAN4-204ENST00000397404 C15orf56Q8N910 161 aa12.62□□□□□ -0.39
TSPAN4-204ENST00000397404 NTN5Q8WTR8 489 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-204ENST00000397404 TMEM238LA0A1B0GVL6 79 aa12.61□□□□□ -0.39
TSPAN4-204ENST00000397404 A6NJY4 79 aa12.61□□□□□ -0.39
TSPAN4-204ENST00000397404 Q6ZR54 194 aa12.6□□□□□ -0.39
TSPAN4-204ENST00000397404 LBHQ53QV2 105 aaPredicted RBP12.59□□□□□ -0.39
TSPAN4-204ENST00000397404 LY6G6CO95867 125 aa12.59□□□□□ -0.39
TSPAN4-204ENST00000397404 CEND1Q8N111 149 aa12.59□□□□□ -0.39
TSPAN4-204ENST00000397404 ERG28Q9UKR5 140 aa12.59□□□□□ -0.39
TSPAN4-204ENST00000397404 RPL24P83731 157 aaKnown RBP12.58□□□□□ -0.4
TSPAN4-204ENST00000397404 RNF151Q2KHN1 245 aa12.58□□□□□ -0.4
TSPAN4-204ENST00000397404 CAMK2N2Q96S95 79 aa12.58□□□□□ -0.4
TSPAN4-204ENST00000397404 LITAFQ99732 161 aa12.58□□□□□ -0.4
TSPAN4-204ENST00000397404 USP17L23D6RBM5 183 aa12.57□□□□□ -0.4
TSPAN4-204ENST00000397404 C6orf223Q8N319 242 aa12.57□□□□□ -0.4
TSPAN4-204ENST00000397404 ALMS1Q8TCU4 4167 aa12.55□□□□□ -0.4
TSPAN4-204ENST00000397404 A6NDN8 102 aa12.55□□□□□ -0.4
TSPAN4-204ENST00000397404 BVES-AS1Q5T3Y7 98 aa12.55□□□□□ -0.4
TSPAN4-204ENST00000397404 C2orf82Q6UX34 121 aa12.54□□□□□ -0.4
TSPAN4-204ENST00000397404 PKIGQ9Y2B9 76 aa12.54□□□□□ -0.4
TSPAN4-204ENST00000397404 DNAH6Q9C0G6 4158 aa12.54□□□□□ -0.4
TSPAN4-204ENST00000397404 LINC00158P58513 81 aa12.53□□□□□ -0.4
TSPAN4-204ENST00000397404 SYCNQ0VAF6 134 aa12.53□□□□□ -0.4
TSPAN4-204ENST00000397404 Q6ZRN7 208 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-204ENST00000397404 SMIM13P0DJ93 91 aa12.53□□□□□ -0.4
TSPAN4-204ENST00000397404 HINT1P49773 126 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-204ENST00000397404 HIGD2BQ4VC39 106 aa12.53□□□□□ -0.4
TSPAN4-204ENST00000397404 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.52□□□□□ -0.41
TSPAN4-204ENST00000397404 C1orf134Q5TEV5 83 aa12.52□□□□□ -0.41
TSPAN4-204ENST00000397404 UNQ6190/PRO20217Q6UXQ8 127 aa12.52□□□□□ -0.41
TSPAN4-204ENST00000397404 LOC107984156A0A0G2JMH3 177 aa12.51□□□□□ -0.41
TSPAN4-204ENST00000397404 ADAMTSL4-AS1Q5T5F5 129 aa12.51□□□□□ -0.41
TSPAN4-204ENST00000397404 ARL17AQ8IVW1 177 aa12.51□□□□□ -0.41
TSPAN4-204ENST00000397404 CNBPP62633 177 aaKnown RBP12.5□□□□□ -0.41
TSPAN4-204ENST00000397404 CARD19Q96LW7 228 aa12.5□□□□□ -0.41
TSPAN4-204ENST00000397404 SNHG12Q9BXW3 62 aa12.5□□□□□ -0.41
TSPAN4-204ENST00000397404 MIR7-3HGQ8N6C7 128 aa12.49□□□□□ -0.41
TSPAN4-204ENST00000397404 LINC00308Q8TCZ7 52 aa12.49□□□□□ -0.41
TSPAN4-204ENST00000397404 M0R2N4 97 aa12.48□□□□□ -0.41
TSPAN4-204ENST00000397404 TLX1NBP0CAT3 122 aa12.48□□□□□ -0.41
TSPAN4-204ENST00000397404 COL5A1-AS1Q5SY13 56 aa12.48□□□□□ -0.41
TSPAN4-204ENST00000397404 MUSTN1Q8IVN3 82 aa12.48□□□□□ -0.41
TSPAN4-204ENST00000397404 C6orf48Q9UBA6 75 aa12.48□□□□□ -0.41
TSPAN4-204ENST00000397404 PFN2P35080 140 aa12.47□□□□□ -0.41
TSPAN4-204ENST00000397404 Q6ZRU5 148 aa12.47□□□□□ -0.41
TSPAN4-204ENST00000397404 NDUFC2-KCTD14E9PQ53 114 aa12.46□□□□□ -0.41
TSPAN4-204ENST00000397404 C10orf25Q5T742 122 aa12.46□□□□□ -0.41
TSPAN4-204ENST00000397404 A0A1B0GWB2 263 aa12.46□□□□□ -0.42
TSPAN4-204ENST00000397404 LRCOL1A6NCL2 159 aa12.46□□□□□ -0.42
TSPAN4-204ENST00000397404 FXYD2P54710 66 aa12.46□□□□□ -0.42
TSPAN4-204ENST00000397404 BATFQ16520 125 aa12.46□□□□□ -0.42
TSPAN4-204ENST00000397404 LINC00526Q96FQ7 95 aa12.46□□□□□ -0.42
TSPAN4-204ENST00000397404 KMT2AQ03164 3969 aa12.45□□□□□ -0.42
TSPAN4-204ENST00000397404 EREGO14944 169 aa12.44□□□□□ -0.42
TSPAN4-204ENST00000397404 A0A0B4J2C4 111 aa12.43□□□□□ -0.42
TSPAN4-204ENST00000397404 A0A0U1RRA0 63 aa12.43□□□□□ -0.42
TSPAN4-204ENST00000397404 NDUFC2O95298 119 aa12.43□□□□□ -0.42
TSPAN4-204ENST00000397404 A4D1N5 150 aa12.42□□□□□ -0.42
TSPAN4-204ENST00000397404 DAND5Q8N907 189 aa12.42□□□□□ -0.42
TSPAN4-204ENST00000397404 NHP2Q9NX24 153 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-204ENST00000397404 LCE6AA0A183 80 aa12.4□□□□□ -0.42
TSPAN4-204ENST00000397404 LECT2O14960 151 aa12.4□□□□□ -0.42
TSPAN4-204ENST00000397404 C9orf116Q5BN46 136 aaPredicted RBP12.4□□□□□ -0.42
TSPAN4-204ENST00000397404 Q8N814 137 aa12.4□□□□□ -0.42
TSPAN4-204ENST00000397404 SND1-IT1Q9HBX3 110 aa12.4□□□□□ -0.42
TSPAN4-204ENST00000397404 A0A087WTM6 91 aa12.4□□□□□ -0.43
TSPAN4-204ENST00000397404 LOC107984640A0A0U1RRK4 108 aa12.4□□□□□ -0.43
TSPAN4-204ENST00000397404 RAB37Q96AX2 223 aa12.39□□□□□ -0.43
TSPAN4-204ENST00000397404 TRAV13-2A0A0B4J235 113 aa12.38□□□□□ -0.43
TSPAN4-204ENST00000397404 SLPIP03973 132 aa12.38□□□□□ -0.43
TSPAN4-204ENST00000397404 WFDC2Q14508 124 aa12.38□□□□□ -0.43
TSPAN4-204ENST00000397404 DNAH10Q8IVF4 4471 aa12.38□□□□□ -0.43
TSPAN4-204ENST00000397404 CFC1BP0CG36 223 aa12.37□□□□□ -0.43
TSPAN4-204ENST00000397404 CFC1P0CG37 223 aa12.37□□□□□ -0.43
TSPAN4-204ENST00000397404 SOSTDC1Q6X4U4 206 aa12.37□□□□□ -0.43
TSPAN4-204ENST00000397404 PRO1854Q9UHT4 67 aa12.37□□□□□ -0.43
TSPAN4-204ENST00000397404 NPC2P61916 151 aa12.36□□□□□ -0.43
TSPAN4-204ENST00000397404 C9orf163Q8N9P6 203 aa12.35□□□□□ -0.43
TSPAN4-204ENST00000397404 DNAH2Q9P225 4427 aa12.35□□□□□ -0.43
TSPAN4-204ENST00000397404 TRBV10-2A0A0K0K1G8 114 aa12.34□□□□□ -0.43
TSPAN4-204ENST00000397404 LINC00474Q9P2X8 69 aa12.34□□□□□ -0.43
TSPAN4-204ENST00000397404 PLA2G2DQ9UNK4 145 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms