RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 LAMA1P25391 3075 aa2.53□□□□□ -2
GABPB1-204ENST00000396464 PPP1R17O96001 155 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 STATHP02808 62 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 CCL3L1P16619 93 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 DEFB110Q30KQ9 67 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 DEFB124Q8NES8 71 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 C18orf32Q8TCD1 76 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 COX7B2Q8TF08 81 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 TMEM14CQ9P0S9 112 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 LENEPQ9Y5L5 61 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 FRYLO94915 3013 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 DOCK11Q5JSL3 2073 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 ALPK2Q86TB3 2170 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 RTTNQ86VV8 2226 aa2.52□□□□□ -2.01
GABPB1-204ENST00000396464 TRBV6-5A0A0K0K1A5 114 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 RPL38P63173 70 aaKnown RBP2.51□□□□□ -2.01
GABPB1-204ENST00000396464 SPAG11BQ08648 103 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 CFAP126Q5VTH2 177 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 HCP5Q6MZN7 132 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 SPAG11AQ6PDA7 123 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 Q6ZRN7 208 aaPredicted RBP2.51□□□□□ -2.01
GABPB1-204ENST00000396464 RPS27LQ71UM5 84 aaKnown RBP2.51□□□□□ -2.01
GABPB1-204ENST00000396464 LINC00643Q86TS7 51 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 EXPH5Q8NEV8 1989 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 DOCK10Q96BY6 2186 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 MUC3AQ02505 3323 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 VPS13AQ96RL7 3174 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 SPAG17Q6Q759 2223 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 MED12Q93074 2177 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 NBDYA0A0U1RRE5 68 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 ACYP1P07311 99 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 KRTAP10-1P60331 282 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 HEPN1Q6WQI6 88 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 TMEM14BQ9NUH8 114 aa2.51□□□□□ -2.01
GABPB1-204ENST00000396464 FN1P02751 2386 aaKnown RBP2.5□□□□□ -2.01
GABPB1-204ENST00000396464 TECTAO75443 2155 aa2.5□□□□□ -2.01
GABPB1-204ENST00000396464 COL5A1P20908 1838 aaPredicted RBP2.5□□□□□ -2.01
GABPB1-204ENST00000396464 USP34Q70CQ2 3546 aa2.5□□□□□ -2.01
GABPB1-204ENST00000396464 A0A0C4DFX4 3053 aa2.5□□□□□ -2.01
GABPB1-204ENST00000396464 IGLV3-32A0A0A0MS00 114 aa2.5□□□□□ -2.01
GABPB1-204ENST00000396464 INE1O15225 51 aa2.5□□□□□ -2.01
GABPB1-204ENST00000396464 IGKV1-17P01599 117 aa2.5□□□□□ -2.01
GABPB1-204ENST00000396464 SPTBP11277 2137 aa2.5□□□□□ -2.01
GABPB1-204ENST00000396464 RPL37AP61513 92 aaKnown RBP2.5□□□□□ -2.01
GABPB1-204ENST00000396464 TMEM170BQ5T4T1 132 aa2.5□□□□□ -2.01
GABPB1-204ENST00000396464 LINC00322Q6ZN03 302 aaPredicted RBP2.5□□□□□ -2.01
GABPB1-204ENST00000396464 S100ZQ8WXG8 99 aa2.5□□□□□ -2.01
GABPB1-204ENST00000396464 V9GYH0 126 aa2.5□□□□□ -2.01
GABPB1-204ENST00000396464 MYO15AQ9UKN7 3530 aa2.49□□□□□ -2.01
GABPB1-204ENST00000396464 ZNF815PA8K554 130 aa2.49□□□□□ -2.01
GABPB1-204ENST00000396464 H0YGG7 62 aa2.49□□□□□ -2.01
GABPB1-204ENST00000396464 FXYD4P59646 89 aa2.49□□□□□ -2.01
GABPB1-204ENST00000396464 ARL2-SNX15V9GYD0 113 aa2.49□□□□□ -2.01
GABPB1-204ENST00000396464 BDP1A6H8Y1 2624 aa2.49□□□□□ -2.01
GABPB1-204ENST00000396464 ABCA4P78363 2273 aa2.48□□□□□ -2.01
GABPB1-204ENST00000396464 F8WEM9 126 aa2.48□□□□□ -2.01
GABPB1-204ENST00000396464 M0R2N4 97 aa2.48□□□□□ -2.01
GABPB1-204ENST00000396464 S100A3P33764 101 aa2.48□□□□□ -2.01
GABPB1-204ENST00000396464 FXYD3Q14802 87 aa2.48□□□□□ -2.01
GABPB1-204ENST00000396464 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
GABPB1-204ENST00000396464 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
GABPB1-204ENST00000396464 PI4KAP42356 2102 aa2.47□□□□□ -2.01
GABPB1-204ENST00000396464 MDC1Q14676 2089 aaKnown RBP2.47□□□□□ -2.01
GABPB1-204ENST00000396464 F5P12259 2224 aa2.47□□□□□ -2.01
GABPB1-204ENST00000396464 IGKV2-40A0A087WW87 121 aaPredicted RBP2.47□□□□□ -2.01
GABPB1-204ENST00000396464 IGKV2-29A2NJV5 120 aaPredicted RBP2.47□□□□□ -2.01
GABPB1-204ENST00000396464 IGKV2D-40P01614 121 aaPredicted RBP2.47□□□□□ -2.01
GABPB1-204ENST00000396464 FAM74A4Q5TZK3 123 aa2.47□□□□□ -2.01
GABPB1-204ENST00000396464 ZNF625Q96I27 306 aaPredicted RBP2.47□□□□□ -2.01
GABPB1-204ENST00000396464 PSENENQ9NZ42 101 aa2.47□□□□□ -2.01
GABPB1-204ENST00000396464 WDR87Q6ZQQ6 2873 aa2.47□□□□□ -2.01
GABPB1-204ENST00000396464 HMGN2P05204 90 aaKnown RBP2.46□□□□□ -2.02
GABPB1-204ENST00000396464 HMGN3Q15651 99 aa2.46□□□□□ -2.02
GABPB1-204ENST00000396464 PSMG4Q5JS54 123 aa2.46□□□□□ -2.02
GABPB1-204ENST00000396464 XAF1Q6GPH4 301 aa2.46□□□□□ -2.02
GABPB1-204ENST00000396464 Q86TA4 180 aa2.46□□□□□ -2.02
GABPB1-204ENST00000396464 C5orf56Q8N8D9 126 aa2.46□□□□□ -2.02
GABPB1-204ENST00000396464 U3KQA8 63 aa2.46□□□□□ -2.02
GABPB1-204ENST00000396464 DNAH14Q0VDD8 3507 aa2.46□□□□□ -2.02
GABPB1-204ENST00000396464 DMXL1Q9Y485 3027 aa2.46□□□□□ -2.02
GABPB1-204ENST00000396464 DMDP11532 3685 aa2.45□□□□□ -2.02
GABPB1-204ENST00000396464 LOC110117498A0A087WWA1 95 aa2.45□□□□□ -2.02
GABPB1-204ENST00000396464 SMIM13P0DJ93 91 aa2.45□□□□□ -2.02
GABPB1-204ENST00000396464 SAA2P0DJI9 122 aaPredicted RBP2.45□□□□□ -2.02
GABPB1-204ENST00000396464 LINC00208Q96KT6 92 aa2.45□□□□□ -2.02
GABPB1-204ENST00000396464 V9GYV3 84 aa2.45□□□□□ -2.02
GABPB1-204ENST00000396464 A0A087WTM6 91 aa2.44□□□□□ -2.02
GABPB1-204ENST00000396464 FAM223BA6NKX1 122 aa2.44□□□□□ -2.02
GABPB1-204ENST00000396464 IQCF6A8MYZ5 107 aa2.44□□□□□ -2.02
GABPB1-204ENST00000396464 CCL18P55774 89 aa2.44□□□□□ -2.02
GABPB1-204ENST00000396464 DEFB109BQ30KR1 87 aa2.44□□□□□ -2.02
GABPB1-204ENST00000396464 DEFB107AQ8IZN7 70 aa2.44□□□□□ -2.02
GABPB1-204ENST00000396464 R4GMQ9 66 aa2.44□□□□□ -2.02
GABPB1-204ENST00000396464 ZDBF2Q9HCK1 2354 aa2.44□□□□□ -2.02
GABPB1-204ENST00000396464 F8VRH5 84 aa2.43□□□□□ -2.02
GABPB1-204ENST00000396464 ZNF563Q8TA94 476 aa2.43□□□□□ -2.02
GABPB1-204ENST00000396464 PPP1R1CQ8WVI7 109 aa2.43□□□□□ -2.02
GABPB1-204ENST00000396464 SDK1Q7Z5N4 2213 aa2.43□□□□□ -2.02
GABPB1-204ENST00000396464 AMELXQ99217 191 aa2.42□□□□□ -2.02
GABPB1-204ENST00000396464 LINC01558Q9Y6Z2 57 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms