RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 C6orf48Q9UBA6 75 aa12.1□□□□□ -0.47
CDKN1B-202ENST00000396340 F8VRH5 84 aa12.09□□□□□ -0.47
CDKN1B-202ENST00000396340 ODF1Q14990 250 aa12.09□□□□□ -0.47
CDKN1B-202ENST00000396340 A0A0J9YXV3 536 aa12.08□□□□□ -0.48
CDKN1B-202ENST00000396340 ZC2HC1BQ5TFG8 222 aa12.08□□□□□ -0.48
CDKN1B-202ENST00000396340 SPINK6Q6UWN8 80 aa12.08□□□□□ -0.48
CDKN1B-202ENST00000396340 CHCHD1Q96BP2 118 aaKnown RBP12.08□□□□□ -0.48
CDKN1B-202ENST00000396340 C10orf25Q5T742 122 aa12.07□□□□□ -0.48
CDKN1B-202ENST00000396340 MYCBP2O75592 4640 aa12.07□□□□□ -0.48
CDKN1B-202ENST00000396340 SERTAD4-AS1Q5TG53 156 aa12.06□□□□□ -0.48
CDKN1B-202ENST00000396340 SFTA2Q6UW10 78 aa12.06□□□□□ -0.48
CDKN1B-202ENST00000396340 REG3GQ6UW15 175 aa12.05□□□□□ -0.48
CDKN1B-202ENST00000396340 C2orf82Q6UX34 121 aa12.05□□□□□ -0.48
CDKN1B-202ENST00000396340 A0A1W2PNN7 141 aa12.04□□□□□ -0.48
CDKN1B-202ENST00000396340 GAGE2EQ4V326 116 aa12.04□□□□□ -0.48
CDKN1B-202ENST00000396340 GAGE2DQ9UEU5 116 aa12.04□□□□□ -0.48
CDKN1B-202ENST00000396340 SMIM1B2RUZ4 78 aa12.03□□□□□ -0.48
CDKN1B-202ENST00000396340 COX7B2Q8TF08 81 aa12.03□□□□□ -0.48
CDKN1B-202ENST00000396340 IGLC3P0DOY3 106 aa12.02□□□□□ -0.49
CDKN1B-202ENST00000396340 NDUFA6P56556 154 aa12.02□□□□□ -0.49
CDKN1B-202ENST00000396340 YPEL4Q96NS1 127 aa12.02□□□□□ -0.49
CDKN1B-202ENST00000396340 HNRNPA3P51991 378 aaKnown RBP12.01□□□□□ -0.49
CDKN1B-202ENST00000396340 LBHQ53QV2 105 aaPredicted RBP11.99□□□□□ -0.49
CDKN1B-202ENST00000396340 A0A096LNJ9 63 aa11.98□□□□□ -0.49
CDKN1B-202ENST00000396340 URB1-AS1Q96HZ7 61 aa11.98□□□□□ -0.49
CDKN1B-202ENST00000396340 M0QXV9 152 aa11.97□□□□□ -0.49
CDKN1B-202ENST00000396340 HSBP1O75506 76 aa11.97□□□□□ -0.49
CDKN1B-202ENST00000396340 FAM19A5Q7Z5A7 132 aaPredicted RBP11.97□□□□□ -0.49
CDKN1B-202ENST00000396340 BAGE3Q86Y29 109 aa11.97□□□□□ -0.49
CDKN1B-202ENST00000396340 PSORS1C2Q9UIG4 136 aa11.97□□□□□ -0.49
CDKN1B-202ENST00000396340 UBE2BP63146 152 aa11.96□□□□□ -0.49
CDKN1B-202ENST00000396340 SRSF9Q13242 221 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDKN1B-202ENST00000396340 COX17Q14061 63 aa11.96□□□□□ -0.49
CDKN1B-202ENST00000396340 PHF5AQ7RTV0 110 aaKnown RBP11.96□□□□□ -0.49
CDKN1B-202ENST00000396340 TP73-AS1Q9UF72 201 aa11.96□□□□□ -0.49
CDKN1B-202ENST00000396340 TRAV12-1A0A0B4J245 112 aa11.95□□□□□ -0.5
CDKN1B-202ENST00000396340 SPINK8P0C7L1 97 aa11.95□□□□□ -0.5
CDKN1B-202ENST00000396340 C1orf137Q5JT78 98 aa11.95□□□□□ -0.5
CDKN1B-202ENST00000396340 IGLV5-39A0A0G2JS06 123 aa11.94□□□□□ -0.5
CDKN1B-202ENST00000396340 CBLN2Q8IUK8 224 aa11.94□□□□□ -0.5
CDKN1B-202ENST00000396340 IFI27L1Q96BM0 104 aa11.94□□□□□ -0.5
CDKN1B-202ENST00000396340 LINC01600Q96MT4 127 aa11.94□□□□□ -0.5
CDKN1B-202ENST00000396340 PMCHL1Q16048 86 aa11.93□□□□□ -0.5
CDKN1B-202ENST00000396340 C9orf129Q5T035 196 aaKnown RBP11.93□□□□□ -0.5
CDKN1B-202ENST00000396340 TMEM170BQ5T4T1 132 aa11.93□□□□□ -0.5
CDKN1B-202ENST00000396340 DIRC1Q969H9 104 aa11.93□□□□□ -0.5
CDKN1B-202ENST00000396340 CHTOPQ9Y3Y2 248 aaKnown RBP11.93□□□□□ -0.5
CDKN1B-202ENST00000396340 FAM168BA1KXE4 195 aa11.92□□□□□ -0.5
CDKN1B-202ENST00000396340 ZNF22P17026 224 aaPredicted RBP11.92□□□□□ -0.5
CDKN1B-202ENST00000396340 PLA2G2DQ9UNK4 145 aa11.92□□□□□ -0.5
CDKN1B-202ENST00000396340 NUPR1O60356 82 aa11.91□□□□□ -0.5
CDKN1B-202ENST00000396340 TRGC2P03986 189 aa11.9□□□□□ -0.5
CDKN1B-202ENST00000396340 IGLV7-43P04211 117 aa11.9□□□□□ -0.5
CDKN1B-202ENST00000396340 SLC7A5P1Q8MH63 180 aa11.9□□□□□ -0.5
CDKN1B-202ENST00000396340 LINC00587B1AMM8 73 aa11.88□□□□□ -0.51
CDKN1B-202ENST00000396340 XAGE1AQ9HD64 81 aa11.88□□□□□ -0.51
CDKN1B-202ENST00000396340 HSPB8Q9UJY1 196 aa11.88□□□□□ -0.51
CDKN1B-202ENST00000396340 C22orf24Q9Y442 160 aa11.88□□□□□ -0.51
CDKN1B-202ENST00000396340 LEPROTL1O95214 131 aa11.87□□□□□ -0.51
CDKN1B-202ENST00000396340 MRPL55Q7Z7F7 128 aaKnown RBP11.87□□□□□ -0.51
CDKN1B-202ENST00000396340 PKHD1L1Q86WI1 4243 aa11.86□□□□□ -0.51
CDKN1B-202ENST00000396340 HERC1Q15751 4861 aa11.86□□□□□ -0.51
CDKN1B-202ENST00000396340 C11orf86A6NJI1 115 aa11.86□□□□□ -0.51
CDKN1B-202ENST00000396340 NKAPP1Q8N9T2 125 aa11.86□□□□□ -0.51
CDKN1B-202ENST00000396340 RPL24P83731 157 aaKnown RBP11.85□□□□□ -0.51
CDKN1B-202ENST00000396340 ERG28Q9UKR5 140 aa11.85□□□□□ -0.51
CDKN1B-202ENST00000396340 IGLV5-37A0A075B6J1 123 aa11.83□□□□□ -0.52
CDKN1B-202ENST00000396340 MT1HL1P0DM35 61 aa11.83□□□□□ -0.52
CDKN1B-202ENST00000396340 PLNP26678 52 aa11.83□□□□□ -0.52
CDKN1B-202ENST00000396340 KRTAP7-1Q8IUC3 87 aa11.83□□□□□ -0.52
CDKN1B-202ENST00000396340 COLCA2A8K830 154 aa11.82□□□□□ -0.52
CDKN1B-202ENST00000396340 H0Y9J4 135 aa11.82□□□□□ -0.52
CDKN1B-202ENST00000396340 PFN2P35080 140 aa11.82□□□□□ -0.52
CDKN1B-202ENST00000396340 HERV-K104P63124 156 aa11.82□□□□□ -0.52
CDKN1B-202ENST00000396340 LRP1Q07954 4544 aaKnown RBP11.81□□□□□ -0.52
CDKN1B-202ENST00000396340 TMEM223A0PJW6 202 aa11.81□□□□□ -0.52
CDKN1B-202ENST00000396340 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
CDKN1B-202ENST00000396340 ATP6V1G1O75348 118 aa11.8□□□□□ -0.52
CDKN1B-202ENST00000396340 SERF1AO75920 110 aa11.8□□□□□ -0.52
CDKN1B-202ENST00000396340 ZNF861PO60384 105 aa11.79□□□□□ -0.52
CDKN1B-202ENST00000396340 RPL28P46779 137 aaKnown RBP11.79□□□□□ -0.52
CDKN1B-202ENST00000396340 ZNF625Q96I27 306 aaPredicted RBP11.78□□□□□ -0.52
CDKN1B-202ENST00000396340 MAP1LC3CQ9BXW4 147 aa11.78□□□□□ -0.52
CDKN1B-202ENST00000396340 IGLV1-50A0A075B6I6 118 aa11.77□□□□□ -0.53
CDKN1B-202ENST00000396340 KRTAP10-8P60410 259 aa11.77□□□□□ -0.53
CDKN1B-202ENST00000396340 HERVK_113P61574 105 aa11.77□□□□□ -0.53
CDKN1B-202ENST00000396340 FAT3Q8TDW7 4589 aa11.77□□□□□ -0.53
CDKN1B-202ENST00000396340 RPL13AP40429 203 aaKnown RBP11.76□□□□□ -0.53
CDKN1B-202ENST00000396340 LINC00167Q96N53 147 aa11.76□□□□□ -0.53
CDKN1B-202ENST00000396340 SND1-IT1Q9HBX3 110 aa11.76□□□□□ -0.53
CDKN1B-202ENST00000396340 MYMXA0A1B0GTQ4 84 aa11.75□□□□□ -0.53
CDKN1B-202ENST00000396340 BCE1O60756 84 aa11.75□□□□□ -0.53
CDKN1B-202ENST00000396340 LINC00158P58513 81 aa11.75□□□□□ -0.53
CDKN1B-202ENST00000396340 DPM2O94777 84 aa11.74□□□□□ -0.53
CDKN1B-202ENST00000396340 KRTAP11-1Q8IUC1 163 aa11.74□□□□□ -0.53
CDKN1B-202ENST00000396340 PLEKHB2Q96CS7 222 aa11.74□□□□□ -0.53
CDKN1B-202ENST00000396340 H0Y8G0 127 aa11.73□□□□□ -0.53
CDKN1B-202ENST00000396340 NMUP48645 174 aa11.72□□□□□ -0.53
CDKN1B-202ENST00000396340 MEIG1Q5JSS6 88 aa11.72□□□□□ -0.53
CDKN1B-202ENST00000396340 FABP4P15090 132 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 424.1 ms