RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 F8WDY8 70 aa9.1□□□□□ -0.95
VAPB-202ENST00000395802 TAL2Q16559 108 aa9.1□□□□□ -0.95
VAPB-202ENST00000395802 COL5A1-AS1Q5SY13 56 aa9.1□□□□□ -0.95
VAPB-202ENST00000395802 SPAG11BQ08648 103 aa9.1□□□□□ -0.95
VAPB-202ENST00000395802 CIRBPQ14011 172 aaKnown RBP9.1□□□□□ -0.95
VAPB-202ENST00000395802 Q6ZR54 194 aa9.09□□□□□ -0.95
VAPB-202ENST00000395802 A0A0J9YXY3 114 aa9.08□□□□□ -0.96
VAPB-202ENST00000395802 M0R2N4 97 aa9.08□□□□□ -0.96
VAPB-202ENST00000395802 C14orf177Q52M58 125 aa9.08□□□□□ -0.96
VAPB-202ENST00000395802 CEND1Q8N111 149 aa9.08□□□□□ -0.96
VAPB-202ENST00000395802 C6orf223Q8N319 242 aa9.08□□□□□ -0.96
VAPB-202ENST00000395802 HIST1H4GQ99525 98 aa9.08□□□□□ -0.96
VAPB-202ENST00000395802 SPANXB1Q9NS25 103 aaPredicted RBP9.08□□□□□ -0.96
VAPB-202ENST00000395802 GVQW2A0A096LPI5 108 aaPredicted RBP9.08□□□□□ -0.96
VAPB-202ENST00000395802 GCSHP23434 173 aa9.08□□□□□ -0.96
VAPB-202ENST00000395802 FXYD2P54710 66 aa9.08□□□□□ -0.96
VAPB-202ENST00000395802 ZNF625Q96I27 306 aaPredicted RBP9.07□□□□□ -0.96
VAPB-202ENST00000395802 C2orf48Q96LS8 159 aa9.07□□□□□ -0.96
VAPB-202ENST00000395802 TMEM238C9JI98 176 aa9.06□□□□□ -0.96
VAPB-202ENST00000395802 KIAA0087Q14695 138 aa9.06□□□□□ -0.96
VAPB-202ENST00000395802 C1orf134Q5TEV5 83 aa9.06□□□□□ -0.96
VAPB-202ENST00000395802 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
VAPB-202ENST00000395802 LITAFQ99732 161 aa9.06□□□□□ -0.96
VAPB-202ENST00000395802 ALMS1Q8TCU4 4167 aa9.06□□□□□ -0.96
VAPB-202ENST00000395802 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
VAPB-202ENST00000395802 NTN5Q8WTR8 489 aaPredicted RBP9.05□□□□□ -0.96
VAPB-202ENST00000395802 SRSF9Q13242 221 aaKnown RBP eCLIP9.05□□□□□ -0.96
VAPB-202ENST00000395802 MEIG1Q5JSS6 88 aa9.05□□□□□ -0.96
VAPB-202ENST00000395802 CAMK2N2Q96S95 79 aa9.05□□□□□ -0.96
VAPB-202ENST00000395802 TIMM17BO60830 172 aa9.04□□□□□ -0.96
VAPB-202ENST00000395802 COX17Q14061 63 aa9.04□□□□□ -0.96
VAPB-202ENST00000395802 Q6ZVH6 145 aa9.04□□□□□ -0.96
VAPB-202ENST00000395802 COPS9Q8WXC6 57 aa9.04□□□□□ -0.96
VAPB-202ENST00000395802 KMT2AQ03164 3969 aa9.04□□□□□ -0.96
VAPB-202ENST00000395802 A6NDN8 102 aa9.03□□□□□ -0.96
VAPB-202ENST00000395802 HIGD2BQ4VC39 106 aa9.03□□□□□ -0.96
VAPB-202ENST00000395802 TRBV30A0A0K0K1B3 111 aa9.03□□□□□ -0.96
VAPB-202ENST00000395802 Q6ZRN7 208 aaPredicted RBP9.03□□□□□ -0.96
VAPB-202ENST00000395802 TAX1BP3O14907 124 aa9.02□□□□□ -0.97
VAPB-202ENST00000395802 PTTG1IPP53801 180 aa9.02□□□□□ -0.97
VAPB-202ENST00000395802 C2orf82Q6UX34 121 aa9.02□□□□□ -0.97
VAPB-202ENST00000395802 DNAH6Q9C0G6 4158 aa9.01□□□□□ -0.97
VAPB-202ENST00000395802 LCE6AA0A183 80 aa9.01□□□□□ -0.97
VAPB-202ENST00000395802 ADAMTSL4-AS1Q5T5F5 129 aa9.01□□□□□ -0.97
VAPB-202ENST00000395802 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
VAPB-202ENST00000395802 SYCNQ0VAF6 134 aa9.01□□□□□ -0.97
VAPB-202ENST00000395802 SPANXDQ9BXN6 97 aa9.01□□□□□ -0.97
VAPB-202ENST00000395802 NHP2Q9NX24 153 aaKnown RBP9.01□□□□□ -0.97
VAPB-202ENST00000395802 SPANXCQ9NY87 97 aa9.01□□□□□ -0.97
VAPB-202ENST00000395802 ERG28Q9UKR5 140 aa9.01□□□□□ -0.97
VAPB-202ENST00000395802 A0A1B0GWB2 263 aa8.99□□□□□ -0.97
VAPB-202ENST00000395802 LINC00158P58513 81 aa8.99□□□□□ -0.97
VAPB-202ENST00000395802 UNQ6190/PRO20217Q6UXQ8 127 aa8.99□□□□□ -0.97
VAPB-202ENST00000395802 LINC00526Q96FQ7 95 aa8.99□□□□□ -0.97
VAPB-202ENST00000395802 K7ERJ3 54 aa8.98□□□□□ -0.97
VAPB-202ENST00000395802 LECT2O14960 151 aa8.98□□□□□ -0.97
VAPB-202ENST00000395802 RNF151Q2KHN1 245 aa8.98□□□□□ -0.97
VAPB-202ENST00000395802 CARD19Q96LW7 228 aa8.98□□□□□ -0.97
VAPB-202ENST00000395802 TMEM238LA0A1B0GVL6 79 aa8.98□□□□□ -0.97
VAPB-202ENST00000395802 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
VAPB-202ENST00000395802 A6NJY4 79 aa8.98□□□□□ -0.97
VAPB-202ENST00000395802 IFITM1P13164 125 aa8.98□□□□□ -0.97
VAPB-202ENST00000395802 PKIGQ9Y2B9 76 aa8.98□□□□□ -0.97
VAPB-202ENST00000395802 SMIM13P0DJ93 91 aa8.97□□□□□ -0.97
VAPB-202ENST00000395802 PFN2P35080 140 aa8.97□□□□□ -0.97
VAPB-202ENST00000395802 CNBPP62633 177 aaKnown RBP8.97□□□□□ -0.97
VAPB-202ENST00000395802 MUSTN1Q8IVN3 82 aa8.97□□□□□ -0.97
VAPB-202ENST00000395802 Q6ZRU5 148 aa8.96□□□□□ -0.97
VAPB-202ENST00000395802 DAND5Q8N907 189 aa8.96□□□□□ -0.97
VAPB-202ENST00000395802 C6orf48Q9UBA6 75 aa8.96□□□□□ -0.97
VAPB-202ENST00000395802 RPL24P83731 157 aaKnown RBP8.96□□□□□ -0.98
VAPB-202ENST00000395802 C10orf25Q5T742 122 aa8.96□□□□□ -0.98
VAPB-202ENST00000395802 PPDPFQ9H3Y8 114 aa8.96□□□□□ -0.98
VAPB-202ENST00000395802 DNAH10Q8IVF4 4471 aa8.95□□□□□ -0.98
VAPB-202ENST00000395802 A0A087WTM6 91 aa8.95□□□□□ -0.98
VAPB-202ENST00000395802 A0A0U1RRA0 63 aa8.95□□□□□ -0.98
VAPB-202ENST00000395802 A4D1N5 150 aa8.95□□□□□ -0.98
VAPB-202ENST00000395802 Q8N814 137 aa8.95□□□□□ -0.98
VAPB-202ENST00000395802 RAB37Q96AX2 223 aa8.95□□□□□ -0.98
VAPB-202ENST00000395802 EIF4EBP3O60516 100 aaPredicted RBP8.94□□□□□ -0.98
VAPB-202ENST00000395802 MIR7-3HGQ8N6C7 128 aa8.94□□□□□ -0.98
VAPB-202ENST00000395802 C9orf118A6NHY6 69 aa8.94□□□□□ -0.98
VAPB-202ENST00000395802 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
VAPB-202ENST00000395802 NPC2P61916 151 aa8.94□□□□□ -0.98
VAPB-202ENST00000395802 WFDC2Q14508 124 aa8.94□□□□□ -0.98
VAPB-202ENST00000395802 TLX1NBP0CAT3 122 aa8.93□□□□□ -0.98
VAPB-202ENST00000395802 CFC1BP0CG36 223 aa8.93□□□□□ -0.98
VAPB-202ENST00000395802 CFC1P0CG37 223 aa8.93□□□□□ -0.98
VAPB-202ENST00000395802 LINC00308Q8TCZ7 52 aa8.93□□□□□ -0.98
VAPB-202ENST00000395802 DNAH2Q9P225 4427 aa8.93□□□□□ -0.98
VAPB-202ENST00000395802 C9orf116Q5BN46 136 aaPredicted RBP8.92□□□□□ -0.98
VAPB-202ENST00000395802 SOSTDC1Q6X4U4 206 aa8.91□□□□□ -0.98
VAPB-202ENST00000395802 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.91□□□□□ -0.98
VAPB-202ENST00000395802 A0A0B4J2C4 111 aa8.91□□□□□ -0.98
VAPB-202ENST00000395802 H3BUT2 72 aa8.91□□□□□ -0.98
VAPB-202ENST00000395802 SLPIP03973 132 aa8.91□□□□□ -0.98
VAPB-202ENST00000395802 LOC107984640A0A0U1RRK4 108 aa8.9□□□□□ -0.98
VAPB-202ENST00000395802 NAA38Q9BRA0 125 aaKnown RBP8.9□□□□□ -0.98
VAPB-202ENST00000395802 LOC107984156A0A0G2JMH3 177 aa8.89□□□□□ -0.99
VAPB-202ENST00000395802 ARL17AQ8IVW1 177 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms