RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 ZC2HC1BQ5TFG8 222 aa8.26□□□□□ -1.09
SCAF11-203ENST00000395453 KRTAP7-1Q8IUC3 87 aa8.26□□□□□ -1.09
SCAF11-203ENST00000395453 LPAP08519 4548 aa8.25□□□□□ -1.09
SCAF11-203ENST00000395453 C1orf137Q5JT78 98 aa8.25□□□□□ -1.09
SCAF11-203ENST00000395453 C2orf82Q6UX34 121 aa8.25□□□□□ -1.09
SCAF11-203ENST00000395453 KRTAP11-1Q8IUC1 163 aa8.25□□□□□ -1.09
SCAF11-203ENST00000395453 C2orf88Q9BSF0 95 aa8.25□□□□□ -1.09
SCAF11-203ENST00000395453 VCX2Q9H322 139 aa8.25□□□□□ -1.09
SCAF11-203ENST00000395453 NXT2Q9NPJ8 142 aaKnown RBP8.25□□□□□ -1.09
SCAF11-203ENST00000395453 GAGE2EQ4V326 116 aa8.24□□□□□ -1.09
SCAF11-203ENST00000395453 Q6ZN92 141 aa8.24□□□□□ -1.09
SCAF11-203ENST00000395453 CTDSP1Q9GZU7 261 aa8.24□□□□□ -1.09
SCAF11-203ENST00000395453 GAGE2DQ9UEU5 116 aa8.24□□□□□ -1.09
SCAF11-203ENST00000395453 NDUFC2-KCTD14E9PQ53 114 aa8.23□□□□□ -1.09
SCAF11-203ENST00000395453 IGLV7-43P04211 117 aa8.23□□□□□ -1.09
SCAF11-203ENST00000395453 ADCYAP1P18509 176 aa8.22□□□□□ -1.09
SCAF11-203ENST00000395453 G0S2P27469 103 aa8.22□□□□□ -1.09
SCAF11-203ENST00000395453 C9orf129Q5T035 196 aaKnown RBP8.22□□□□□ -1.09
SCAF11-203ENST00000395453 FAM19A5Q7Z5A7 132 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-203ENST00000395453 PACRGQ96M98 296 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-203ENST00000395453 TRAV9-1A0A075B6T8 112 aa8.21□□□□□ -1.1
SCAF11-203ENST00000395453 UQCC3Q6UW78 93 aa8.21□□□□□ -1.1
SCAF11-203ENST00000395453 DIRC1Q969H9 104 aa8.21□□□□□ -1.1
SCAF11-203ENST00000395453 TOMM6Q96B49 74 aa8.21□□□□□ -1.1
SCAF11-203ENST00000395453 TIMM17AQ99595 171 aa8.21□□□□□ -1.1
SCAF11-203ENST00000395453 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
SCAF11-203ENST00000395453 TMEM218A2RU14 115 aa8.2□□□□□ -1.1
SCAF11-203ENST00000395453 SEC11AP67812 179 aa8.2□□□□□ -1.1
SCAF11-203ENST00000395453 KIAA1644Q3SXP7 199 aa8.2□□□□□ -1.1
SCAF11-203ENST00000395453 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
SCAF11-203ENST00000395453 PAPPA-AS1Q5QFB9 102 aa8.2□□□□□ -1.1
SCAF11-203ENST00000395453 Q8IZM0 81 aa8.2□□□□□ -1.1
SCAF11-203ENST00000395453 MUC2Q02817 5179 aa8.2□□□□□ -1.1
SCAF11-203ENST00000395453 M0QXV9 152 aa8.19□□□□□ -1.1
SCAF11-203ENST00000395453 HERVK_113P63121 156 aa8.19□□□□□ -1.1
SCAF11-203ENST00000395453 IFITM2Q01629 132 aa8.19□□□□□ -1.1
SCAF11-203ENST00000395453 ERASQ7Z444 233 aa8.19□□□□□ -1.1
SCAF11-203ENST00000395453 CDKN2A-AS1Q9UH64 79 aa8.19□□□□□ -1.1
SCAF11-203ENST00000395453 LINC01546A6NGU7 62 aa8.18□□□□□ -1.1
SCAF11-203ENST00000395453 H0Y9J4 135 aa8.18□□□□□ -1.1
SCAF11-203ENST00000395453 PRSS2P07478 247 aa8.18□□□□□ -1.1
SCAF11-203ENST00000395453 CKS1BP61024 79 aa8.18□□□□□ -1.1
SCAF11-203ENST00000395453 ALKBH7Q9BT30 221 aaPredicted RBP8.18□□□□□ -1.1
SCAF11-203ENST00000395453 GNB1LQ9BYB4 327 aa8.18□□□□□ -1.1
SCAF11-203ENST00000395453 TOMM7Q9P0U1 55 aa8.18□□□□□ -1.1
SCAF11-203ENST00000395453 SEC11CQ9BY50 192 aa8.17□□□□□ -1.1
SCAF11-203ENST00000395453 SCGB3A1Q96QR1 104 aa8.16□□□□□ -1.1
SCAF11-203ENST00000395453 GEMIN7Q9H840 131 aaKnown RBP8.16□□□□□ -1.1
SCAF11-203ENST00000395453 LINC01549A6NIU2 74 aa8.15□□□□□ -1.1
SCAF11-203ENST00000395453 F8VRH5 84 aa8.15□□□□□ -1.1
SCAF11-203ENST00000395453 KRTAP1-4P0C5Y4 121 aa8.15□□□□□ -1.1
SCAF11-203ENST00000395453 UBE2BP63146 152 aa8.15□□□□□ -1.1
SCAF11-203ENST00000395453 PRR26Q8N8Z3 221 aa8.15□□□□□ -1.1
SCAF11-203ENST00000395453 IGLV5-45A0A087WSX0 123 aa8.14□□□□□ -1.11
SCAF11-203ENST00000395453 TINCRA0A1B0GVN0 87 aa8.14□□□□□ -1.11
SCAF11-203ENST00000395453 LINC00469Q8N7U9 141 aa8.14□□□□□ -1.11
SCAF11-203ENST00000395453 C22orf24Q9Y442 160 aa8.14□□□□□ -1.11
SCAF11-203ENST00000395453 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
SCAF11-203ENST00000395453 S100PP25815 95 aa8.13□□□□□ -1.11
SCAF11-203ENST00000395453 CXCL5P42830 114 aa8.13□□□□□ -1.11
SCAF11-203ENST00000395453 PDZD11Q5EBL8 140 aa8.13□□□□□ -1.11
SCAF11-203ENST00000395453 CST9LQ9H4G1 147 aa8.13□□□□□ -1.11
SCAF11-203ENST00000395453 XAGE1AQ9HD64 81 aa8.13□□□□□ -1.11
SCAF11-203ENST00000395453 IGLV1-50A0A075B6I6 118 aa8.12□□□□□ -1.11
SCAF11-203ENST00000395453 COX19Q49B96 90 aa8.12□□□□□ -1.11
SCAF11-203ENST00000395453 C10orf91Q5T1B1 145 aa8.12□□□□□ -1.11
SCAF11-203ENST00000395453 TP73-AS1Q9UF72 201 aa8.11□□□□□ -1.11
SCAF11-203ENST00000395453 NUPR1O60356 82 aa8.1□□□□□ -1.11
SCAF11-203ENST00000395453 ZNF861PO60384 105 aa8.1□□□□□ -1.11
SCAF11-203ENST00000395453 LBHQ53QV2 105 aaPredicted RBP8.1□□□□□ -1.11
SCAF11-203ENST00000395453 COX7B2Q8TF08 81 aa8.1□□□□□ -1.11
SCAF11-203ENST00000395453 FAT4Q6V0I7 4981 aa8.1□□□□□ -1.11
SCAF11-203ENST00000395453 PMVKQ15126 192 aa8.09□□□□□ -1.11
SCAF11-203ENST00000395453 KRTAP9-3Q9BYQ3 159 aa8.09□□□□□ -1.11
SCAF11-203ENST00000395453 FABP9Q0Z7S8 132 aa8.08□□□□□ -1.12
SCAF11-203ENST00000395453 FA2HQ7L5A8 372 aa8.08□□□□□ -1.12
SCAF11-203ENST00000395453 MRPL55Q7Z7F7 128 aaKnown RBP8.08□□□□□ -1.12
SCAF11-203ENST00000395453 COMMD7Q86VX2 200 aa8.08□□□□□ -1.12
SCAF11-203ENST00000395453 CARHSP1Q9Y2V2 147 aaKnown RBP8.08□□□□□ -1.12
SCAF11-203ENST00000395453 TMEM238LA0A1B0GVL6 79 aa8.07□□□□□ -1.12
SCAF11-203ENST00000395453 RHEBQ15382 184 aa8.07□□□□□ -1.12
SCAF11-203ENST00000395453 SPINK8P0C7L1 97 aa8.06□□□□□ -1.12
SCAF11-203ENST00000395453 RPS10P5Q9NQ39 176 aa8.06□□□□□ -1.12
SCAF11-203ENST00000395453 SMCO4Q9NRQ5 59 aa8.06□□□□□ -1.12
SCAF11-203ENST00000395453 A0A096LNJ9 63 aa8.05□□□□□ -1.12
SCAF11-203ENST00000395453 RPL13AP40429 203 aaKnown RBP8.05□□□□□ -1.12
SCAF11-203ENST00000395453 URB1-AS1Q96HZ7 61 aa8.05□□□□□ -1.12
SCAF11-203ENST00000395453 LINC00167Q96N53 147 aa8.05□□□□□ -1.12
SCAF11-203ENST00000395453 IGLV5-37A0A075B6J1 123 aa8.04□□□□□ -1.12
SCAF11-203ENST00000395453 IGLV5-39A0A0G2JS06 123 aa8.04□□□□□ -1.12
SCAF11-203ENST00000395453 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
SCAF11-203ENST00000395453 H3BRM9 83 aa8.03□□□□□ -1.12
SCAF11-203ENST00000395453 BCE1O60756 84 aa8.03□□□□□ -1.12
SCAF11-203ENST00000395453 LINC00614P0C842 121 aa8.03□□□□□ -1.12
SCAF11-203ENST00000395453 RAB5BP61020 215 aa8.03□□□□□ -1.12
SCAF11-203ENST00000395453 C18orf32Q8TCD1 76 aa8.03□□□□□ -1.12
SCAF11-203ENST00000395453 RPL37AP8A6NKH3 93 aa8.03□□□□□ -1.12
SCAF11-203ENST00000395453 PRR4Q16378 134 aa8.03□□□□□ -1.12
SCAF11-203ENST00000395453 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
SCAF11-203ENST00000395453 TRAPPC1Q9Y5R8 145 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms