RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 F8WDY8 70 aa9.34□□□□□ -0.91
SNCA-205ENST00000394991 K7EMI3 77 aa9.34□□□□□ -0.91
SNCA-205ENST00000394991 FABP9Q0Z7S8 132 aa9.34□□□□□ -0.91
SNCA-205ENST00000394991 TEX43Q6ZNM6 134 aa9.34□□□□□ -0.91
SNCA-205ENST00000394991 MRPL18Q9H0U6 180 aaKnown RBP9.34□□□□□ -0.91
SNCA-205ENST00000394991 IGHV3OR16-9A0A0B4J2B5 98 aa9.33□□□□□ -0.92
SNCA-205ENST00000394991 SNAPINO95295 136 aa9.33□□□□□ -0.92
SNCA-205ENST00000394991 Q6ZN92 141 aa9.33□□□□□ -0.92
SNCA-205ENST00000394991 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
SNCA-205ENST00000394991 TGIF2-C20orf24A0A0A6YYL0 155 aa9.32□□□□□ -0.92
SNCA-205ENST00000394991 ZC2HC1BQ5TFG8 222 aa9.32□□□□□ -0.92
SNCA-205ENST00000394991 SVBPQ8N300 66 aa9.32□□□□□ -0.92
SNCA-205ENST00000394991 C2orf88Q9BSF0 95 aa9.32□□□□□ -0.92
SNCA-205ENST00000394991 VCX2Q9H322 139 aa9.32□□□□□ -0.92
SNCA-205ENST00000394991 A0A087X002 238 aa9.31□□□□□ -0.92
SNCA-205ENST00000394991 G0S2P27469 103 aa9.31□□□□□ -0.92
SNCA-205ENST00000394991 IGIPA6NJ69 53 aa9.3□□□□□ -0.92
SNCA-205ENST00000394991 ZNF861PO60384 105 aa9.3□□□□□ -0.92
SNCA-205ENST00000394991 C4orf48Q5BLP8 95 aa9.3□□□□□ -0.92
SNCA-205ENST00000394991 C9orf129Q5T035 196 aaKnown RBP9.3□□□□□ -0.92
SNCA-205ENST00000394991 LINC00242Q5T6M2 205 aa9.3□□□□□ -0.92
SNCA-205ENST00000394991 KIAA0087Q14695 138 aa9.29□□□□□ -0.92
SNCA-205ENST00000394991 TOMM6Q96B49 74 aa9.29□□□□□ -0.92
SNCA-205ENST00000394991 TRAPPC1Q9Y5R8 145 aa9.29□□□□□ -0.92
SNCA-205ENST00000394991 LINC00173Q6ZV60 143 aa9.28□□□□□ -0.92
SNCA-205ENST00000394991 FA2HQ7L5A8 372 aa9.28□□□□□ -0.92
SNCA-205ENST00000394991 SCGB3A1Q96QR1 104 aa9.28□□□□□ -0.92
SNCA-205ENST00000394991 AMELXQ99217 191 aa9.28□□□□□ -0.92
SNCA-205ENST00000394991 SMCO4Q9NRQ5 59 aa9.28□□□□□ -0.92
SNCA-205ENST00000394991 NPSP0C0P6 89 aa9.27□□□□□ -0.93
SNCA-205ENST00000394991 PAPPA-AS1Q5QFB9 102 aa9.27□□□□□ -0.93
SNCA-205ENST00000394991 TIMM17AQ99595 171 aa9.27□□□□□ -0.93
SNCA-205ENST00000394991 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
SNCA-205ENST00000394991 RETNLBQ9BQ08 111 aa9.26□□□□□ -0.93
SNCA-205ENST00000394991 NDUFC2-KCTD14E9PQ53 114 aa9.25□□□□□ -0.93
SNCA-205ENST00000394991 ERASQ7Z444 233 aa9.25□□□□□ -0.93
SNCA-205ENST00000394991 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
SNCA-205ENST00000394991 LINC01546A6NGU7 62 aa9.24□□□□□ -0.93
SNCA-205ENST00000394991 TYMSOSQ8TAI1 123 aa9.24□□□□□ -0.93
SNCA-205ENST00000394991 LINC01549A6NIU2 74 aa9.23□□□□□ -0.93
SNCA-205ENST00000394991 NUPR1O60356 82 aa9.23□□□□□ -0.93
SNCA-205ENST00000394991 GEMIN7Q9H840 131 aaKnown RBP9.23□□□□□ -0.93
SNCA-205ENST00000394991 CRYGAP11844 174 aa9.22□□□□□ -0.93
SNCA-205ENST00000394991 HERVK_113P63121 156 aa9.22□□□□□ -0.93
SNCA-205ENST00000394991 SEC11AP67812 179 aa9.22□□□□□ -0.93
SNCA-205ENST00000394991 SLC7A5P1Q8MH63 180 aa9.22□□□□□ -0.93
SNCA-205ENST00000394991 C18orf32Q8TCD1 76 aa9.22□□□□□ -0.93
SNCA-205ENST00000394991 FAM19A3Q7Z5A8 133 aa9.21□□□□□ -0.94
SNCA-205ENST00000394991 LINC01561Q8N1V8 128 aa9.21□□□□□ -0.94
SNCA-205ENST00000394991 TOMM7Q9P0U1 55 aa9.21□□□□□ -0.94
SNCA-205ENST00000394991 C22orf24Q9Y442 160 aa9.21□□□□□ -0.94
SNCA-205ENST00000394991 PRSS2P07478 247 aa9.2□□□□□ -0.94
SNCA-205ENST00000394991 LINC00614P0C842 121 aa9.2□□□□□ -0.94
SNCA-205ENST00000394991 TPRXLQ17RH7 258 aa9.2□□□□□ -0.94
SNCA-205ENST00000394991 KRTAP13-2Q52LG2 175 aa9.2□□□□□ -0.94
SNCA-205ENST00000394991 PACRGQ96M98 296 aaPredicted RBP9.2□□□□□ -0.94
SNCA-205ENST00000394991 CDIP1Q9H305 208 aa9.2□□□□□ -0.94
SNCA-205ENST00000394991 ANAPC11Q9NYG5 84 aa9.2□□□□□ -0.94
SNCA-205ENST00000394991 CDKN2A-AS1Q9UH64 79 aa9.2□□□□□ -0.94
SNCA-205ENST00000394991 CBLN2Q8IUK8 224 aa9.19□□□□□ -0.94
SNCA-205ENST00000394991 LINC00469Q8N7U9 141 aa9.19□□□□□ -0.94
SNCA-205ENST00000394991 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
SNCA-205ENST00000394991 YPEL4Q96NS1 127 aa9.19□□□□□ -0.94
SNCA-205ENST00000394991 CST9LQ9H4G1 147 aa9.19□□□□□ -0.94
SNCA-205ENST00000394991 RPL28P46779 137 aaKnown RBP9.18□□□□□ -0.94
SNCA-205ENST00000394991 NDUFA6P56556 154 aa9.18□□□□□ -0.94
SNCA-205ENST00000394991 PMVKQ15126 192 aa9.18□□□□□ -0.94
SNCA-205ENST00000394991 PMCHL1Q16048 86 aa9.18□□□□□ -0.94
SNCA-205ENST00000394991 C6orf226Q5I0X4 101 aa9.18□□□□□ -0.94
SNCA-205ENST00000394991 TINCRA0A1B0GVN0 87 aa9.17□□□□□ -0.94
SNCA-205ENST00000394991 BCE1O60756 84 aa9.17□□□□□ -0.94
SNCA-205ENST00000394991 RAB5BP61020 215 aa9.17□□□□□ -0.94
SNCA-205ENST00000394991 CKS1BP61024 79 aa9.17□□□□□ -0.94
SNCA-205ENST00000394991 XAGE1AQ9HD64 81 aa9.17□□□□□ -0.94
SNCA-205ENST00000394991 A0A096LNJ9 63 aa9.16□□□□□ -0.94
SNCA-205ENST00000394991 HBDP02042 147 aa9.16□□□□□ -0.94
SNCA-205ENST00000394991 LBHQ53QV2 105 aaPredicted RBP9.16□□□□□ -0.94
SNCA-205ENST00000394991 Q8IZM0 81 aa9.16□□□□□ -0.94
SNCA-205ENST00000394991 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.94
SNCA-205ENST00000394991 LCE2CQ5TA81 110 aa9.15□□□□□ -0.94
SNCA-205ENST00000394991 LINC00304Q8N9R0 145 aa9.14□□□□□ -0.95
SNCA-205ENST00000394991 SPINK8P0C7L1 97 aa9.13□□□□□ -0.95
SNCA-205ENST00000394991 MRPL55Q7Z7F7 128 aaKnown RBP9.13□□□□□ -0.95
SNCA-205ENST00000394991 TP73-AS1Q9UF72 201 aa9.13□□□□□ -0.95
SNCA-205ENST00000394991 CRCT1Q9UGL9 99 aa9.13□□□□□ -0.95
SNCA-205ENST00000394991 IGLV5-45A0A087WSX0 123 aa9.12□□□□□ -0.95
SNCA-205ENST00000394991 SMIM1B2RUZ4 78 aa9.12□□□□□ -0.95
SNCA-205ENST00000394991 PDZD11Q5EBL8 140 aa9.12□□□□□ -0.95
SNCA-205ENST00000394991 H3BRM9 83 aa9.11□□□□□ -0.95
SNCA-205ENST00000394991 ATP5LO75964 103 aa9.11□□□□□ -0.95
SNCA-205ENST00000394991 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
SNCA-205ENST00000394991 COX7B2Q8TF08 81 aa9.11□□□□□ -0.95
SNCA-205ENST00000394991 FSIP2Q5CZC0 6907 aa9.1□□□□□ -0.95
SNCA-205ENST00000394991 RPL37AP8A6NKH3 93 aa9.1□□□□□ -0.95
SNCA-205ENST00000394991 F8VRH5 84 aa9.1□□□□□ -0.95
SNCA-205ENST00000394991 TRGC2P03986 189 aa9.1□□□□□ -0.95
SNCA-205ENST00000394991 IGLC3P0DOY3 106 aa9.1□□□□□ -0.95
SNCA-205ENST00000394991 BAGE3Q86Y29 109 aa9.1□□□□□ -0.95
SNCA-205ENST00000394991 CHCHD1Q96BP2 118 aaKnown RBP9.1□□□□□ -0.95
SNCA-205ENST00000394991 LINC00167Q96N53 147 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms