RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 GAGE2EQ4V326 116 aa11.11□□□□□ -0.63
SMARCD1-202ENST00000394963 SHISA2Q6UWI4 295 aa11.11□□□□□ -0.63
SMARCD1-202ENST00000394963 GAGE2DQ9UEU5 116 aa11.11□□□□□ -0.63
SMARCD1-202ENST00000394963 TRIAP1O43715 76 aa11.1□□□□□ -0.63
SMARCD1-202ENST00000394963 ATXN8Q156A1 80 aa11.1□□□□□ -0.63
SMARCD1-202ENST00000394963 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
SMARCD1-202ENST00000394963 TIRAPP58753 221 aa11.1□□□□□ -0.63
SMARCD1-202ENST00000394963 AKAP9Q99996 3911 aa11.1□□□□□ -0.63
SMARCD1-202ENST00000394963 KIR2DL5BQ8NHK3 375 aa11.09□□□□□ -0.63
SMARCD1-202ENST00000394963 F8W1H4 67 aa11.08□□□□□ -0.63
SMARCD1-202ENST00000394963 KRTAP10-11P60412 298 aa11.08□□□□□ -0.63
SMARCD1-202ENST00000394963 ANK3Q12955 4377 aaKnown RBP11.08□□□□□ -0.64
SMARCD1-202ENST00000394963 NCR3O14931 201 aa11.08□□□□□ -0.64
SMARCD1-202ENST00000394963 SPAG11BQ08648 103 aa11.07□□□□□ -0.64
SMARCD1-202ENST00000394963 C6orf223Q8N319 242 aa11.07□□□□□ -0.64
SMARCD1-202ENST00000394963 CARD19Q96LW7 228 aa11.07□□□□□ -0.64
SMARCD1-202ENST00000394963 COPS9Q8WXC6 57 aa11.07□□□□□ -0.64
SMARCD1-202ENST00000394963 WFDC10BQ8IUB3 73 aa11.07□□□□□ -0.64
SMARCD1-202ENST00000394963 RNF183Q96D59 192 aa11.07□□□□□ -0.64
SMARCD1-202ENST00000394963 NDUFA1O15239 70 aa11.06□□□□□ -0.64
SMARCD1-202ENST00000394963 DPH3Q96FX2 82 aa11.06□□□□□ -0.64
SMARCD1-202ENST00000394963 UBE2DNLQ8IWF7 75 aa11.05□□□□□ -0.64
SMARCD1-202ENST00000394963 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
SMARCD1-202ENST00000394963 SPANXB1Q9NS25 103 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-202ENST00000394963 ANKRD29Q8N6D5 301 aa11.05□□□□□ -0.64
SMARCD1-202ENST00000394963 TRBV20-1A0A075B6N2 111 aa11.04□□□□□ -0.64
SMARCD1-202ENST00000394963 C1orf43Q9BWL3 253 aa11.04□□□□□ -0.64
SMARCD1-202ENST00000394963 LINC01620Q4KN68 170 aa11.03□□□□□ -0.64
SMARCD1-202ENST00000394963 Q8NAQ8 132 aa11.03□□□□□ -0.64
SMARCD1-202ENST00000394963 SBSPONQ8IVN8 264 aa11.03□□□□□ -0.64
SMARCD1-202ENST00000394963 CAMK2N2Q96S95 79 aa11.03□□□□□ -0.64
SMARCD1-202ENST00000394963 SLPIP03973 132 aa11.03□□□□□ -0.64
SMARCD1-202ENST00000394963 UNQ6190/PRO20217Q6UXQ8 127 aa11.03□□□□□ -0.64
SMARCD1-202ENST00000394963 TEX49A0A1B0GTD5 131 aa11.02□□□□□ -0.65
SMARCD1-202ENST00000394963 HERV-K104P63124 156 aa11.02□□□□□ -0.65
SMARCD1-202ENST00000394963 IL17DQ8TAD2 202 aa11.01□□□□□ -0.65
SMARCD1-202ENST00000394963 IFITM1P13164 125 aa11□□□□□ -0.65
SMARCD1-202ENST00000394963 SOSTDC1Q6X4U4 206 aa11□□□□□ -0.65
SMARCD1-202ENST00000394963 IGHV3OR16-9A0A0B4J2B5 98 aa10.99□□□□□ -0.65
SMARCD1-202ENST00000394963 RPL18AQ02543 176 aaKnown RBP10.99□□□□□ -0.65
SMARCD1-202ENST00000394963 PSCAO43653 123 aa10.99□□□□□ -0.65
SMARCD1-202ENST00000394963 CCL18P55774 89 aa10.98□□□□□ -0.65
SMARCD1-202ENST00000394963 WFDC9Q8NEX5 89 aa10.98□□□□□ -0.65
SMARCD1-202ENST00000394963 A0A0B4J2C4 111 aa10.98□□□□□ -0.65
SMARCD1-202ENST00000394963 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
SMARCD1-202ENST00000394963 SIGMAR1Q99720 223 aa10.97□□□□□ -0.65
SMARCD1-202ENST00000394963 LYPD5Q6UWN5 251 aa10.96□□□□□ -0.65
SMARCD1-202ENST00000394963 A0A087WZ39 114 aa10.96□□□□□ -0.65
SMARCD1-202ENST00000394963 LELP1Q5T871 98 aa10.96□□□□□ -0.65
SMARCD1-202ENST00000394963 BAALC-AS2P0C853 105 aa10.96□□□□□ -0.66
SMARCD1-202ENST00000394963 FOXI1Q12951 378 aa10.96□□□□□ -0.66
SMARCD1-202ENST00000394963 CD164L2Q6UWJ8 174 aa10.96□□□□□ -0.66
SMARCD1-202ENST00000394963 TRAV13-2A0A0B4J235 113 aa10.95□□□□□ -0.66
SMARCD1-202ENST00000394963 SNCGO76070 127 aa10.95□□□□□ -0.66
SMARCD1-202ENST00000394963 GAGE2AQ6NT46 116 aa10.95□□□□□ -0.66
SMARCD1-202ENST00000394963 PPDPFLQ8WWR9 84 aa10.95□□□□□ -0.66
SMARCD1-202ENST00000394963 TENM2Q9NT68 2774 aa10.95□□□□□ -0.66
SMARCD1-202ENST00000394963 TRAV8-4A0A0B4J246 113 aa10.95□□□□□ -0.66
SMARCD1-202ENST00000394963 TEN1Q86WV5 123 aa10.94□□□□□ -0.66
SMARCD1-202ENST00000394963 H7C423 109 aa10.94□□□□□ -0.66
SMARCD1-202ENST00000394963 SPANXDQ9BXN6 97 aa10.94□□□□□ -0.66
SMARCD1-202ENST00000394963 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
SMARCD1-202ENST00000394963 LITAFQ99732 161 aa10.93□□□□□ -0.66
SMARCD1-202ENST00000394963 C10orf25Q5T742 122 aa10.93□□□□□ -0.66
SMARCD1-202ENST00000394963 IGLV5-39A0A0G2JS06 123 aa10.93□□□□□ -0.66
SMARCD1-202ENST00000394963 ESRGQ1W209 222 aa10.93□□□□□ -0.66
SMARCD1-202ENST00000394963 LINC00337Q8N6G1 96 aa10.91□□□□□ -0.66
SMARCD1-202ENST00000394963 MDFIQ99750 246 aa10.91□□□□□ -0.66
SMARCD1-202ENST00000394963 GAGE2BQ13066 116 aa10.9□□□□□ -0.66
SMARCD1-202ENST00000394963 SMIM11BQ8TCY0 68 aa10.9□□□□□ -0.66
SMARCD1-202ENST00000394963 LAMTOR3Q9UHA4 124 aa10.9□□□□□ -0.66
SMARCD1-202ENST00000394963 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.9□□□□□ -0.66
SMARCD1-202ENST00000394963 SMCPP49901 116 aaPredicted RBP10.9□□□□□ -0.66
SMARCD1-202ENST00000394963 TTC32Q5I0X7 151 aa10.9□□□□□ -0.66
SMARCD1-202ENST00000394963 C15orf53Q8NAA6 179 aa10.9□□□□□ -0.66
SMARCD1-202ENST00000394963 SPATA25Q9BR10 227 aa10.9□□□□□ -0.66
SMARCD1-202ENST00000394963 IBA57-AS1B1ANH7 110 aa10.89□□□□□ -0.67
SMARCD1-202ENST00000394963 IGKV2-24A0A0C4DH68 120 aa10.89□□□□□ -0.67
SMARCD1-202ENST00000394963 M0R2N4 97 aa10.88□□□□□ -0.67
SMARCD1-202ENST00000394963 IGLV5-45A0A087WSX0 123 aa10.88□□□□□ -0.67
SMARCD1-202ENST00000394963 DEFB105AQ8NG35 78 aa10.88□□□□□ -0.67
SMARCD1-202ENST00000394963 TRBV10-2A0A0K0K1G8 114 aa10.87□□□□□ -0.67
SMARCD1-202ENST00000394963 A0A1B0GUV1 79 aa10.87□□□□□ -0.67
SMARCD1-202ENST00000394963 C6orf99Q4VX62 202 aa10.87□□□□□ -0.67
SMARCD1-202ENST00000394963 TRBV30A0A0K0K1B3 111 aa10.87□□□□□ -0.67
SMARCD1-202ENST00000394963 IGKV2-28A0A075B6P5 120 aa10.85□□□□□ -0.67
SMARCD1-202ENST00000394963 IGKV2D-28P01615 120 aa10.85□□□□□ -0.67
SMARCD1-202ENST00000394963 TIMM17BO60830 172 aa10.84□□□□□ -0.67
SMARCD1-202ENST00000394963 Q8IZM0 81 aa10.84□□□□□ -0.67
SMARCD1-202ENST00000394963 C14orf132Q9NPU4 83 aa10.84□□□□□ -0.67
SMARCD1-202ENST00000394963 ENHOQ6UWT2 76 aa10.83□□□□□ -0.68
SMARCD1-202ENST00000394963 NKAPP1Q8N9T2 125 aa10.83□□□□□ -0.68
SMARCD1-202ENST00000394963 MT-ATP8P03928 68 aa10.83□□□□□ -0.68
SMARCD1-202ENST00000394963 TGP01266 2768 aa10.83□□□□□ -0.68
SMARCD1-202ENST00000394963 A0A087WYN8 130 aa10.82□□□□□ -0.68
SMARCD1-202ENST00000394963 TRAV10A0A0B4J240 114 aa10.81□□□□□ -0.68
SMARCD1-202ENST00000394963 K7EIL1 84 aa10.81□□□□□ -0.68
SMARCD1-202ENST00000394963 FAM218AQ96MZ4 157 aa10.81□□□□□ -0.68
SMARCD1-202ENST00000394963 LST1O00453 97 aa10.81□□□□□ -0.68
SMARCD1-202ENST00000394963 PRO0461Q9UI25 63 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms